GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:58:52

Sequence gi568815586f:4944148_5145986 : 201839 bp : 44.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12116  12184   69  1  0   63   87    46 0.394   3.07
 1.02 Term +  20365  20448   84  0  0   97   37   101 0.600   3.55
 1.03 PlyA +  22011  22016    6                               1.05

 2.00 Prom +  28338  28377   40                              -3.26
 2.01 Init +  32955  33265  311  2  2   61   66   151 0.407   7.25
 2.02 Intr +  34997  35111  115  2  1   98   69    41 0.520   3.65
 2.03 Term +  38549  38602   54  1  0   78   43    90 0.527   1.06
 2.04 PlyA +  39289  39294    6                               1.05

 3.09 PlyA -  40132  40127    6                               1.05
 3.08 Term -  40888  40770  119  2  2  132   55    77 0.938   7.50
 3.07 Intr -  44592  44442  151  0  1   75   80    81 0.481   5.74
 3.06 Intr -  55245  55082  164  1  2   78   77    15 0.130  -0.91
 3.05 Intr -  56772  56539  234  1  0   53   60   106 0.122   1.96
 3.04 Intr -  58819  58715  105  2  0   87   94     1 0.044   0.79
 3.03 Intr -  75353  75180  174  0  0  109   44    37 0.260   1.31
 3.02 Intr -  77593  77486  108  2  0  101   89    53 0.674   6.96
 3.01 Init -  78157  78073   85  1  1   52   85    47 0.230   1.78
 3.00 Prom -  87715  87676   40                              -3.76

 4.02 PlyA -  88282  88277    6                               1.05
 4.01 Sngl -  88974  88402  573  0  0   21   42   598 0.502  44.67
 4.00 Prom -  93769  93730   40                              -4.06

 5.00 Prom +  96373  96412   40                              -3.26
 5.01 Sngl + 100001 101842 1842  1  0  105   48  3122 0.995 304.04
 5.02 PlyA + 102616 102621    6                               1.05

 6.00 Prom + 114322 114361   40                              -4.06
 6.01 Init + 119368 119430   63  0  0   27   89    69 0.044   2.05
 6.02 Term + 137065 137172  108  0  0   85   55   101 0.540   5.01
 6.03 PlyA + 137980 137985    6                               1.05

 7.04 PlyA - 138876 138871    6                               1.05
 7.03 Term - 144869 144301  569  0  2   29   42   182 0.061   2.28
 7.02 Intr - 155247 155109  139  0  1   46   28   197 0.242   9.54
 7.01 Init - 158819 158745   75  2  0   69   66    16 0.306  -1.35
 7.00 Prom - 165952 165913   40                              -1.36

 8.05 PlyA - 167147 167142    6                               1.05
 8.04 Term - 171453 171333  121  2  1   83   46    52 0.420  -1.55
 8.03 Intr - 173808 172938  871  1  1   83   53   271 0.126  13.50
 8.02 Intr - 175849 174449 1401  2  0   42   40   437 0.073  23.51
 8.01 Init - 177029 176678  352  2  1   71   58   162 0.088   8.82
 8.00 Prom - 183498 183459   40                              -3.16


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:4944148_5145986|GENSCAN_predicted_peptide_1|50_aa
MYDSLFHRELSRGEHGGCLLTRKDLCRIIVSKSPLNCCLFRDTYSDHSLK

>gi568815586f:4944148_5145986|GENSCAN_predicted_CDS_1|153_bp
atgtatgactcactcttccaccgggaattaagcagaggagagcatggtggctgcctgctg
acaagaaaggatctttgccgcatcattgtatccaagtcaccgctcaactgctgcctcttc
agagacacctactctgaccactctctaaagtag

>gi568815586f:4944148_5145986|GENSCAN_predicted_peptide_2|159_aa
MPFACMPAGVVVPSCSPVLFLSMVLSTGGGPIIQDCGGVEENTREPSEWWHRHLTYLENC
LETGDSLRALLPGPIIAGSQAACRKGEYTTALHGLGEDDFSTSCTGVREEEVEAAVLGSG
FIPCDSSGLPQVLLSTYTTGHQELAYSAIDLTINTLMET

>gi568815586f:4944148_5145986|GENSCAN_predicted_CDS_2|480_bp
atgccatttgcctgcatgcctgctggtgtggtggtgccgtcctgttctcccgtgctgttc
ctcagcatggttctctccacgggtggaggacccatcattcaggattgtggtggcgtagaa
gaaaacacacgggagccttctgagtggtggcaccggcatcttacataccttgaaaactgc
ctggaaacaggtgattcattacgggctctgcttccaggcccgatcatagcaggatcccag
gcagcctgcagaaagggagagtacactactgctcttcatggtctgggggaggatgacttc
agtacctcatgcacaggggtgcgagaggaggaagtggaggctgcagtgctgggctctggg
ttcattccctgtgattcctctgggctgccccaagtcctgctcagcacatacacaacagga
caccaggaacttgcctattctgccattgacctcaccatcaacactttgatggagacctaa

>gi568815586f:4944148_5145986|GENSCAN_predicted_peptide_3|379_aa
MLLAQGSYFESQDMSPSPTSSDSTSISAVHWLAEVAAVSQQRGDHDLRGKGKRKRPSHKA
CCHHDCEPLEGRGALSNRDSAGQTQPGTKHIFDIHLLNDCLQGLKGIPDLGIRKPGRDEQ
SPVGTPKLRAPSALRVLTQATSPFGKTGLHPAPQNEEGEPEDSLTLKEAATAPAEGKREE
HVNAKRTAEPAAAVATRSEWEVQATRGQQLVLLCPQRLWSLNESGSSPWVGGRNPGCSDC
TMDMRVNACQAISWCFPHIACVHRYIPVRHMAREATCASSPERDLQTTLHLSGGLAELMS
GINQQGGKSVSSAAPLPPRNHLLKLLSSIHLPEAPVMQAAGALLPAIICHCKQPVQQCAA
VSTSSERRHLLPEDTFRYA

>gi568815586f:4944148_5145986|GENSCAN_predicted_CDS_3|1140_bp
atgctgctggcccaaggatcatactttgagtcacaggacatgagcccatcaccaacatcc
agtgactcaacatccatatcagctgtccactggctggcagaagtagctgcagttagccag
cagcggggtgaccatgacctgagaggaaaaggaaagaggaaaagaccaagtcataaagcc
tgctgccaccatgactgtgagcctctggagggcaggggggccttatccaacagggattct
gcaggccaaacacagcctggcacgaagcatatatttgatatacacctgctgaatgactgt
ttacaaggtctgaaaggaataccagatttggggatcagaaaaccaggcagagatgaacag
agcccagtggggacgcccaaactaagggctcccagcgctctgcgtgttctgacccaggca
acgtcaccttttggaaagacaggcttgcaccctgctccgcaaaatgaggaaggggagcca
gaggactctctgaccctgaaagaggcggccacagcccctgctgaggggaagagggaagag
catgtgaatgcaaagaggactgcagagcctgctgcagctgtagccactcgctcggagtgg
gaagtccaggccacccgagggcagcagcttgtcctcctctgccctcagaggctgtggtca
ttgaatgagtctggatcttctccctgggttgggggaaggaatccaggctgcagtgactgc
accatggatatgagagtgaatgcttgtcaggccatcagttggtgttttccccacatcgca
tgtgtgcacaggtacatacctgtgaggcacatggccagggaggccacctgtgcttcttcc
ccagagagagaccttcagaccaccctccatctgagcggaggactggctgagctgatgagt
ggtataaatcaacaaggtggcaaatcggtgagttctgctgctcctttgcccccaaggaac
cacttgttaaagctcctgagcagcatccacctccctgaagcacctgtcatgcaggctgcg
ggggccttactgcctgccatcatctgccactgcaaacaacctgttcagcagtgtgcagct
gtgagcacatcctctgagagaaggcatctgctacccgaagataccttcaggtatgcctga

>gi568815586f:4944148_5145986|GENSCAN_predicted_peptide_4|190_aa
MLELQGPRECIKKGKWEPEPQPVLALVLELRLGPLPGLGLAWLEEHLLVPPVWPSCGERK
PGRTMAVMFTPLTVKYVYCDTERIGVDLIVKTCFSPNRVIGLSGDLQQVGGASARIRDAL
SRVLQYAEDVLSGKVSVGRFLVNLVNQVPKIVPDDFEIMLNGNINDLLMVTYLANLTQSQ
IALSEKLVNL

>gi568815586f:4944148_5145986|GENSCAN_predicted_CDS_4|573_bp
atgctggaactccagggccccagggaatgcatcaagaagggaaagtgggaaccagagccg
cagccggtgctggcattggtgctggaactgaggctgggaccgctgccggggctggggctg
gcgtggctggaggagcacttgctggtaccgccggtgtggccatcttgtggagaaagaaag
cctgggaggaccatggcagtgatgttcacacctctgacagtgaaatatgtatactgtgac
actgaacgcattggagttgacctgatcgtgaagacctgctttagccccaacagagtgatt
ggactctcaggtgacttgcagcaagtaggaggggcatccgctcgcatccgggatgccttg
agcagagtgttgcaatatgcagaggatgtactctctggaaaggtgtcggttggccgcttc
ctggtgaacctggttaaccaagtacccaaaatagttcccgatgacttcgagatcatgctc
aacggtaacatcaacgacctgttgatggtgacctacctggccaacctcacacagtcacag
attgccctcagtgaaaaacttgtaaacctgtga

>gi568815586f:4944148_5145986|GENSCAN_predicted_peptide_5|613_aa
MEIALVPLENGGAMTVRGGDEARAGCGQATGGELQCPPTAGLSDGPKEPAPKGRGAQRDA
DSGVRPLPPLPDPGVRPLPPLPEELPRPRRPPPEDEEEEGDPGLGTVEDQALGTASLHHQ
RVHINISGLRFETQLGTLAQFPNTLLGDPAKRLRYFDPLRNEYFFDRNRPSFDGILYYYQ
SGGRLRRPVNVSLDVFADEIRFYQLGDEAMERFREDEGFIKEEEKPLPRNEFQRQVWLIF
EYPESSGSARAIAIVSVLVILISIITFCLETLPEFRDERELLRHPPAPHQPPAPAPGANG
SGVMAPPSGPTVAPLLPRTLADPFFIVETTCVIWFTFELLVRFFACPSKAGFSRNIMNII
DVVAIFPYFITLGTELAEQQPGGGGGGQNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGL
QILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADNQGTHFSSIPDAFWWAVVTMTT
VGYGDMRPITVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDHEEPAVLKEEQG
TQSQGPGLDRGVQRKVSGSRGSFCKAGGTLENADSARRGSCPLEKCNVKAKSNVDLRRSL
YALCLDTSRETDL

>gi568815586f:4944148_5145986|GENSCAN_predicted_CDS_5|1842_bp
atggagatcgccctggtgcccctggagaacggcggtgccatgaccgtcagaggaggcgat
gaggcccgggcaggctgcggccaggccacagggggagagctccagtgtcccccgacggct
gggctcagcgatgggcccaaggagccggcgccaaaggggcgcggcgcgcagagagacgcg
gactcgggagtgcggcccttgcctccgctgccggacccgggagtgcggcccttgcctccg
ctgccagaggagctgccacggcctcgacggccgcctcccgaggacgaggaggaagaaggc
gatcccggcctgggcacggtggaggaccaggctctgggcacggcgtccctgcaccaccag
cgcgtccacatcaacatctccgggctgcgctttgagacgcagctgggcaccctggcgcag
ttccccaacacactcctgggggaccccgccaagcgcctgcgctacttcgaccccctgagg
aacgagtacttcttcgaccgcaaccggcccagcttcgacggtatcctctactactaccag
tccgggggccgcctgcggaggccggtcaacgtctccctggacgtgttcgcggacgagata
cgcttctaccagctgggggacgaggccatggagcgcttccgcgaggatgagggcttcatt
aaagaagaggagaagcccctgccccgcaacgagttccagcgccaggtgtggcttatcttc
gagtatccggagagctctgggtccgcgcgggccatcgccatcgtctcggtcttggttatc
ctcatctccatcatcaccttctgcttggagaccctgcctgagttcagggatgaacgtgag
ctgctccgccaccctccggcgccccaccagcctcccgcgcccgcccctggggccaacggc
agcggggtcatggccccgccctctggccctacggtggcaccgctcctgcccaggaccctg
gccgaccccttcttcatcgtggagaccacgtgcgtcatctggttcaccttcgagctgctc
gtgcgcttcttcgcctgccccagcaaggcagggttctcccggaacatcatgaacatcatc
gatgtggtggccatcttcccctacttcatcaccctgggcaccgaactggcagagcagcag
ccagggggtggaggaggcggccagaatgggcagcaggccatgtccctggccatcctccga
gtcatccgcctggtccgggtgttccgcatcttcaagctctcccgccactccaaggggctg
cagatcctgggcaagaccttgcaggcctccatgagggagctggggctgctcatcttcttc
ctcttcatcggggtcatcctcttctccagtgccgtctacttcgcagaggctgacaaccag
ggaacccatttctctagcatccctgacgccttctggtgggcagtggtcaccatgaccact
gtgggctacggggacatgaggcccatcactgttgggggcaagatcgtgggctcgctgtgt
gccatcgccggggtcctcaccattgccctgcctgtgcccgtcatcgtctccaacttcaac
tacttctaccaccgggaaacggatcacgaggagccggcagtccttaaggaagagcagggc
actcagagccaggggccggggctggacagaggagtccagcggaaggtcagcgggagcagg
ggatccttctgcaaggctggggggaccctggagaatgcagacagtgcccgaaggggcagc
tgccccctagagaagtgtaacgtcaaggccaagagcaacgtggacttgcggaggtccctt
tatgccctctgcctggacaccagccgggaaacagatttgtga

>gi568815586f:4944148_5145986|GENSCAN_predicted_peptide_6|56_aa
MCEKALKGMSMVPESDGLPSQFPIGWRSARMDSDRLVTQQGGGKLWMRILGFPEDA

>gi568815586f:4944148_5145986|GENSCAN_predicted_CDS_6|171_bp
atgtgtgaaaaagcactgaaggggatgtctatggtgcctgaaagtgatggtttaccttct
cagttccccattggctggcggagtgctcggatggacagtgaccgtctggtgacccagcag
ggcggagggaagctttggatgagaatcctcggcttccctgaggacgcctga

>gi568815586f:4944148_5145986|GENSCAN_predicted_peptide_7|260_aa
MGHLILFSIGPALGTGTQTFTSLCVMCIADALRSPPLSPPCAEQYCEVQPGICRADPTSV
VDSGQLDAIWRFTTLVQKRGFETLRPTLLAASTTSVHGAGRWGTNIPAGPWRMVGKGPVD
FLPQSTFTPQRGRQESRLKENVHLLPPCFVALNMRLESMTRPAFAAAAGSQGKADWVLCP
ATSKGGIWMVLEDGRVTLCGSLRPGPVDQEARHCQPQDGDAWSPGDGHWLSLPRQATSQI
QPQVCGGGTHLNEGTTLLCK

>gi568815586f:4944148_5145986|GENSCAN_predicted_CDS_7|783_bp
atggggcatctcatcctcttctccatcggaccagccttaggaacaggaactcagactttc
acatctttgtgtgtgatgtgcatcgccgatgcacttcgcagccctccgctgtcgccccct
tgtgcggagcaatactgcgaggtgcagccaggaatctgcagagcagaccctaccagtgta
gtggacagtggacagctggatgccatctggaggttcaccaccctggtgcagaagcgcggc
tttgagacactgcgccccaccctgctagcagccagtaccacgtcagtccacggggctggg
aggtggggcacaaacatccctgcgggcccctggaggatggttggaaaaggccctgtggac
ttcctgcctcagagcacgttcactccgcagagaggcagacaagaaagccgtttaaaagaa
aatgtgcatctcctgcctccttgtttcgtggccttgaacatgcgtttggaaagcatgacg
aggccggcgtttgcagccgctgcgggaagtcaaggaaaggctgactgggtgctctgccca
gccacttccaagggtggaatctggatggttttggaggatgggagagttaccctgtgtggc
tcactcaggcctggtcctgtggaccaggaggccaggcactgccagccgcaggatggggac
gcttggagccccggcgacggccactggctctccctgccacgtcaggccacatcacagatc
cagccacaggtgtgtggaggagggactcacctgaacgagggaacaactctcctgtgcaag
tga

>gi568815586f:4944148_5145986|GENSCAN_predicted_peptide_8|914_aa
MEGEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQD
IIQENFPNLARQANVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKDRS
TRQKVNKDTQELNSALHQADLIDIYRTLHLKSTEYTFFSAPHHTYSKIDHILGSKALLSK
CKRTEIITNYLSDHSAIKLELRIKNLTQNRSTTWKLNNLLLNDYWVHNKMKAEIKMFFET
NENKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQEQTHSKASR
RQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKNLIDAIKND
KGDITTDPTEIQTTIREYYKHLYTNKLENLEEMDKFLDTYTLPRLNEEEVESLNRPITGA
EIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSCYEASIIL
IPKPGRDTTKKENFRPISLMNIDAKILNKILAKRIQQHIKKLIHHDQVGFIPGMQGWFNI
RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLELEETTVKFIWNQKRA
HIAKSILSQKNKAGGITLRDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITLHIYNY
LIFDKPEKNKQWGTDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTI
KTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPT
KWEKIFTTYSSDKGLISRIYNELKQIYKKKTNNPIKKWAKDMNRHFSEEDIYAAKKHMKK
CSSSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNRHAPFSIHTHIMFGSLYLQIQKDLSI
LGFWYPRGILEPIY

>gi568815586f:4944148_5145986|GENSCAN_predicted_CDS_8|2745_bp
atggaaggtgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgatggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaata
cagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaagacagatca
acgagacagaaagtcaacaaggatacccaggaattgaactcagctctgcaccaagcggac
ctaatagacatctacagaactctccacctcaaatcaacagaatatacatttttttcagca
ccacaccacacttattccaaaattgaccacatacttggaagtaaagctctcctcagcaaa
tgtaaaagaacagaaattataacaaactatctctcagaccacagtgcaatcaaactggaa
ctcaggattaagaatctcactcaaaaccgctcaactacatggaaactgaacaacctgctc
ctgaatgactactgggtacataacaaaatgaaggcagaaataaaaatgttctttgaaacc
aacgagaacaaagacacaacataccagaatctctgggacacattcaaagcagtgtgtaga
gggaaatttatagcactaaatgcccacaagagaaagcaggaaagatccaaaattgacacc
ctaacatcacaattaaaagaactagaaaagcaagagcaaacacattcaaaagctagcaga
aggcaagaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaaccctt
caaaaaattaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagaccg
ctagcaagactaataaagaaaaaaagagagaagaatctaatagacgcaataaaaaatgat
aaaggggatatcaccaccgatcccacagaaatacaaactaccatcagagaatactacaaa
cacctctacacaaataaactagaaaatctagaagaaatggataaattcctcgacacatac
actctcccaagactaaacgaggaagaagttgaatctctgaatagaccaataacaggagct
gaaattgtggcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattc
acagctgaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattc
caatcaatagaaaaagagggaatcctccctaactcatgttatgaggccagcatcattctg
ataccaaagccaggcagagacacaacaaaaaaagagaattttagaccaatatccttgatg
aacattgatgcaaaaatcctcaataaaatactggcaaaacgaatccagcagcacatcaaa
aagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaatata
cgcaaatcaataaatgtaatccagcatataaacagagccaaagacaaaaaccacatgatt
atctcaatagatgcagaaaaagcctttgacaaaattcaacaacccttcatgctaaaaact
ctcaataaattagaattggaagaaactactgtaaagttcatatggaaccaaaaaagagcc
cacatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacgtgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataacgctgcatatctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaacggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaatcaattcaagatggattaaagacttaaacgttagacctaaaaccata
aaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
aaatgggagaaaattttcacaacctactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcaaag
gacatgaacagacacttctcagaagaagacatttatgcagccaaaaaacacatgaaaaaa
tgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctc
acaccagttagaatggcaatcattaaaaagtcaggaaacaacaggcatgcacccttttcc
atacacacccacattatgttcggctctctatatctacagatacagaaggacttgagcatc
cttggattttggtatccacggggcatcctggaaccaatctactga