GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:56:58

Sequence gi568815597r:38774554_38976098 : 201545 bp : 44.55% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8236   8290   55  0  1   83   83    11 0.581   1.55
 1.02 Term +   9422   9585  164  0  2   46   49   142 0.764   4.20
 1.03 PlyA +  10286  10291    6                               1.05

 2.00 Prom +  23646  23685   40                              -2.76
 2.01 Init +  29483  29589  107  1  2   58   78   100 0.155   3.69
 2.02 Intr +  29640  29795  156  0  0   49   23   170 0.122   5.73
 2.03 Intr +  33239  33373  135  2  0   57   37   138 0.242   5.28
 2.04 Intr +  35544  35727  184  0  1   85   39    24 0.309  -3.01
 2.05 Intr +  37343  37372   30  1  0  111   99    35 0.916   5.23
 2.06 Intr +  41761  42078  318  0  0  117   58   144 0.748  10.45
 2.07 Term +  45295  45459  165  0  0   15   48   106 0.106  -2.78
 2.08 PlyA +  46260  46265    6                               1.05

 3.10 PlyA -  46921  46916    6                               1.05
 3.09 Term -  50925  50825  101  1  2  105   44    67 0.870   2.29
 3.08 Intr -  51136  51082   55  1  1   70  105    44 0.059   2.85
 3.07 Intr -  65151  65096   56  1  2  121   90    55 0.169   7.70
 3.06 Intr -  71534  71386  149  1  2   66   85    94 0.999   6.78
 3.05 Intr -  77204  77062  143  2  2   59  106   117 0.995   9.75
 3.04 Intr -  77935  77821  115  0  1   83   89    45 0.978   4.55
 3.03 Intr -  81354  81155  200  0  2   72   60    93 0.988   3.05
 3.02 Intr -  82529  82326  204  2  0  103   66   160 0.972  14.70
 3.01 Init -  85093  84857  237  1  0   86  105   281 0.789  27.61
 3.00 Prom -  87503  87464   40                              -2.46

 4.06 PlyA -  88445  88440    6                               1.05
 4.05 Term -  90161  90117   45  2  0  118   45    60 0.952   1.91
 4.04 Intr -  92436  92327  110  1  2   -9   94   155 0.497   6.40
 4.03 Intr -  98537  98465   73  2  1  108   84   140 0.959  14.58
 4.02 Intr -  99356  99208  149  0  2   91   48    38 0.843   0.05
 4.01 Init - 101545 100225 1321  1  1   88   86   390 0.353  30.44
 4.00 Prom - 111849 111810   40                              -4.96

 5.10 PlyA - 111904 111899    6                               1.05
 5.09 Term - 112130 111951  180  2  0  107   43    89 0.957   3.91
 5.08 Intr - 113471 113410   62  0  2   85  117    40 0.879   5.05
 5.07 Intr - 118671 118611   61  0  1   63   97    59 0.235   2.61
 5.06 Intr - 121516 121416  101  2  2   94   83     4 0.149   0.33
 5.05 Intr - 136881 136769  113  2  2  111   82    70 0.632   8.72
 5.04 Intr - 144251 144206   46  0  1  131   11    46 0.215  -1.33
 5.03 Intr - 144784 144386  399  2  0   91   98   231 0.185  18.88
 5.02 Intr - 149357 149264   94  2  1   68   75    63 0.113   2.54
 5.01 Intr - 199310 199165  146  0  2   42   50   104 0.282   2.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  51109  51082   28  1  1   79  105    41 0.912   4.66


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:38774554_38976098|GENSCAN_predicted_peptide_1|72_aa
MDSPLNYAEASGDERREGTLCWVSRRDSVFAPPTGLAHVSVHTRASFRKRSHRKGSPSGD
PGQERRILLINY

>gi568815597r:38774554_38976098|GENSCAN_predicted_CDS_1|219_bp
atggacagtcctctaaattacgctgaggcatcaggggacgaaaggagagaggggacactt
tgctgggtcagccgccgtgactcagtgttcgcgcccccgaccgggctggcacacgtgagt
gtgcacacgcgcgcaagcttccggaagcgcagccaccgcaaggggtctccttcgggggat
ccaggccaggagcgcaggatcctgctcattaattattga

>gi568815597r:38774554_38976098|GENSCAN_predicted_peptide_2|364_aa
MRSQGQASAASGLGARRPRPTLPLWPLAPARARAARAAISRAACCPAPRCSRPRATGGNN
EAQRHDRGPRLRRRQQRGRRISISEAFLCFGYSPGLRPDLPALRNNAIHIPPGSLEHISG
LHFSSEHAYSPVRTALWVRGLEYRIQTAPSLCCNIFRAFSSSTQPDPQPLPTCYGASPGL
ESGELSLVFLGPRQGFEQPLVTKQALRSRGGGSSARNRTRCKLLGYPFTRLTPPTQVFPF
PQTASPAANKDGCSRPLRAVKGVLLQRLQRRLVRPELELQAPRESHLPPWAVGGLPATLA
NCMAVWNNYRVFLNVRHKCIKDDQGSYLYQQADFLHLVGLHQTTKETVIDCTVEEIQASR
GGLS

>gi568815597r:38774554_38976098|GENSCAN_predicted_CDS_2|1095_bp
atgcggagtcaggggcaggcctcggcggcgtccgggctgggggcgaggcgcccacgcccc
accctcccgctgtggccgctggcgccggcccgagcgcgcgcagcccgcgcagccatcagc
cgcgccgcgtgctgtcccgcgccccgctgctcgcggccgcgggccaccggcggtaataat
gaggcacagcgccatgaccgcggccctcggctgcgccgccggcagcagcgcgggcgccgc
attagcatctccgaagccttcctgtgtttcggctacagccctggcctgcgtcctgacctg
ccagcccttcgcaacaatgccatccacattcctcctgggtctctggaacacatctctggc
ttgcacttctcctctgagcacgcttattcacctgtcaggactgccctgtgggtccgaggc
ttagaatacaggatccaaactgcaccatccctctgctgcaacatcttcagggctttctca
tcatccacacaaccagatcctcagcctcttccgacctgctatggagcaagccctggactg
gagtctggagagctgagccttgttttcctgggacctcggcaggggtttgagcagccactg
gtgaccaaacaggctctgaggagccgaggcggtggcagcagcgcgaggaacagaacacgc
tgcaaactgcttggctacccctttacaagactgacgccgccgacacaagtttttccattt
ccccaaacagcctctccggctgccaataaagacggctgctctaggcccttgcgtgctgtc
aaaggggtacttctccagcggcttcagaggcggcttgttcgcccagagctggagctgcag
gcccctagagagagccaccttcccccttgggctgttggtgggctccctgcgaccctggcc
aattgcatggctgtgtggaataattaccgggtctttttgaatgtaagacacaaatgtatc
aaggatgatcaaggttcctacctctaccagcaagctgattttttgcatttggtgggcctc
catcagaccaccaaggaaacagtcatagattgtactgtggaggaaattcaggcgtcccgc
ggaggcctaagctga

>gi568815597r:38774554_38976098|GENSCAN_predicted_peptide_3|419_aa
MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS
KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQ
MDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKV
DGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQL
PTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYG
LKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFR
KAIHEVFESFWNRAEEAMSHVLIGRKGERTLALSWPPNLPGSSPSTSIYRISPNGHAGS

>gi568815597r:38774554_38976098|GENSCAN_predicted_CDS_3|1260_bp
atgtccctgcagtacggggcggaggagacgcccctcgccggcagttacggcgcggccgat
tcgtttccaaaggacttcggctacggcgtggaggaggaggaagaggaggcggcggcggcg
ggcggaggggttggggcaggggcaggcggtggctgtggtccggggggcgctgacagctcc
aagccgaggattctgctcatgggactccggcgcagcggcaagtcctccatccagaaggtg
gtgtttcataagatgtcacccaacgagaccctctttttggaaagtaccaacaagatttat
aaggatgacatttccaatagctcctttgtgaatttccagatatgggattttcctgggcaa
atggacttttttgacccaacctttgactatgagatgatcttcaggggaacaggagcattg
atatacgtcattgacgcacaggatgactacatggaggctttaacaagacttcacattact
gtttctaaagcctacaaagttaacccagacatgaattttgaggtttttattcacaaagtt
gatggtctgtctgatgatcacaaaatagaaacacagagggacattcatcaaagggccaat
gatgaccttgcagatgctgggctagaaaaactccatcttagcttttatctgactagtatc
tatgaccattcaatatttgaagcctttagtaaggtggtgcagaaactcattccacaactg
ccgaccttggaaaacctattaaatatctttatatcaaattcaggtattgaaaaagctttt
ctctttgatgttgtcagcaaaatctacattgcaacagacagttcccctgtggatatgcaa
tcttatgaactttgctgtgacatgatcgatgttgtaattgatgtgtcttgtatatatggg
ttaaaggaagatggaagtggaagtgcttatgacaaagaatctatggcaattatcaagctg
aataatacaactgtcctttatttaaaggaggtgactaaatttttggcactggtctgcatt
ctaagggaagaaagctttgaaagaaaaggtttaatagactacaacttccactgtttccga
aaagctattcatgaggtttttgagagcttttggaacagggctgaggaagccatgagtcac
gtcctcattggccgtaaaggtgaacgaaccctagctctgtcttggcctccaaacctaccc
ggttctagcccctccacaagtatctaccgcatcagccccaacgggcatgcagggagctag

>gi568815597r:38774554_38976098|GENSCAN_predicted_peptide_4|565_aa
MGDWNLLGDTLEEVHIHSTMIGKIWLTILFIFRMLVLGVAAEDVWNDEQSGFICNTEQPG
CRNVCYDQAFPISLIRYWVLQVIFVSSPSLVYMGHALYRLRVLEEERQRMKAQLRVELEE
VEFEMPRDRRRLEQELCQLEKRKLNKAPLRGTLLCTYVIHIFTRSVVEVGFMIGQYLLYG
FHLEPLFKCHGHPCPNIIDCFVSRPTEKTIFLLFMQSIATISLFLNILEIFHLGFKKIKR
GLWGKYKLKKEHNEFHANKAKQNVAKYQSTSANSLKRLPSAPDYNLLVEKQTHTAVYPSL
NSSSVFQPNPDNHSVNDEKCILDEQETVLSNEISTLSTSCSHFQHISSNNNKDTHKIFGK
ELNGNQLMEKRETEGKDSKRNYYSRGHRSIPGVAIDGENNMRQSPQTVFSLPANCDWKPR
WLRATWGSSTEHENRGSPPKVPGSKATASSLLLILQRPTSSQPRLKETPKIKAEAKIYDS
KHPPRLLQSTAADSKREQFRRYLEKSGVLDTLTKGAATPENPEIELLRLELAEMKEKYEA
IVEENKKLKAKLAQYEPPQEEKRAE

>gi568815597r:38774554_38976098|GENSCAN_predicted_CDS_4|1698_bp
atgggggactggaatctccttggagatactctggaggaagttcacatccactccaccatg
attggaaagatctggctcaccatcctgttcatatttcgaatgcttgttctgggtgtagca
gctgaagatgtctggaatgatgagcagtctggcttcatctgcaatacagaacaaccaggc
tgcagaaatgtatgctacgaccaggcctttcctatctccctcattagatactgggttctg
caggtgatatttgtgtcttcaccatccctggtctacatgggccatgcattgtaccgactg
agagttcttgaggaagagaggcaaaggatgaaagctcagttaagagtagaactggaggag
gtagagtttgaaatgcctagggatcggaggagattggagcaagagctttgtcagctggag
aaaaggaaactaaataaagctccactcagaggaaccttgctttgcacttatgtgatacac
attttcactcgctctgtggttgaagttggattcatgattggacagtaccttttatatgga
tttcacttagagccgctatttaagtgccatggccacccgtgtccaaatataatcgactgt
tttgtctcaagaccaacagaaaagacaatattcctattatttatgcaatctatagccact
atttcacttttcttaaacattcttgaaattttccacctaggttttaaaaagattaaaaga
gggctttggggaaaatacaagttgaagaaggaacataatgaattccatgcaaacaaggca
aaacaaaatgtagccaaataccagagcacatctgcaaattcactgaagcgactcccttct
gcccctgattataatctgttagtggaaaagcaaacacacactgcagtgtaccctagttta
aattcatcttctgtattccagccaaatcctgacaatcatagtgtaaatgatgagaaatgc
attttggatgaacaggaaactgtactttctaatgagatttccacacttagtactagttgt
agtcattttcaacacatcagttcaaacaataacaaagacactcataaaatatttggaaaa
gaacttaatggtaaccagttaatggaaaaaagagaaactgaaggcaaagacagcaaaagg
aactactactctagaggtcaccgttctattccaggtgttgctatagatggagagaacaac
atgaggcagtcaccccaaacagttttctccttgccagctaactgcgattggaaaccgcgg
tggcttagagctacatggggttcctctacagaacatgaaaaccgggggtcacctcctaaa
gtgcctggctcaaaagctactgcaagctcgttactgctcatcctccagaggcccacatca
agtcagccacgactcaaggagactccaaagataaaagctgaagccaaaatatatgattct
aaacaccctcctcggctactgcaaagcactgccgccgactcgaagcgtgagcagttccgg
aggtacttggagaagtcgggggtgctggacacgctgaccaagggagctgctactccagaa
aatccagaaatagagctgcttcgcctagaactggccgaaatgaaagagaagtatgaagct
attgtagaagaaaataaaaaactgaaagcaaagcttgctcagtatgaaccacctcaggag
gagaagcgtgctgaatag

>gi568815597r:38774554_38976098|GENSCAN_predicted_peptide_5|400_aa
XKCHNVTPVSGLLACECQCIPLEVQMPVCSDTDVLLSMSSPFCASFCALDENFSQQCHPV
LICVCEAFQKRVGSNLLQIRGKALESSRCARQPREERQPEDLGPPAVPWDSCPSGEEGGP
RTMAAVHDLEMESMNLNMGREMKEELEEEEKMREDGGGKDRAKSKKVHRIVSKWMLPEKS
RGTYLERANCFPPPVFIISISLAEVNGERGGHRAAFEAFPILTVTANPGVQHILGNLCMQ
LVLGIPLEMVHKGLRVGLVYLAGVIAGSLASSIFDPLRYLVGASGGVYALMGGYFMNVLV
NFQEMIPAFGIFRLLIIILIIVLDMGFALYRRFFVPEDGSPVSFAAHIAGGFAGMSIGYT
VFSCFDKALLKDPRFWIAIAAYLACVLFAVFFNIFLSPAN

>gi568815597r:38774554_38976098|GENSCAN_predicted_CDS_5|1203_bp
nccaaatgccacaatgttacaccagttagtggcctgctggcatgtgagtgccagtgcatt
cctcttgaagtccagatgcctgtgtgttccgacaccgatgtgctcctctcaatgtccagc
cccttctgtgcctccttctgtgccttggatgagaacttctcgcagcagtgccacccagtt
ttgatctgtgtatgcgaggcctttcaaaaaagagtgggcagcaacttgctgcagataaga
ggaaaggccttggaaagcagtcgttgcgccagacagcccagggaagagcggcagcctgag
gacctagggccacctgctgttccctgggattcatgtccttctggggaggagggaggaccc
aggacaatggctgctgttcatgatctggagatggagagcatgaatctgaatatggggaga
gagatgaaagaagagctggaggaagaggagaaaatgagagaggatgggggaggtaaagat
cgggccaagagtaaaaaggtccacaggattgtctcaaaatggatgctgcccgaaaagtcc
cgaggaacatacttggagagagctaactgcttcccgcctcccgtgttcatcatctccatc
agcctggccgaggtgaatggggagcggggtgggcaccgggctgcctttgaggctttccct
atactcacggtcactgccaacccaggagttcagcacatcttggggaatctttgtatgcag
cttgttttgggtattcccttggaaatggtccacaaaggcctccgtgtggggctggtgtac
ctggcaggagtgattgcagggtcccttgccagctccatctttgacccactcagatatctt
gtgggagcttcaggaggagtctatgctctgatgggaggctattttatgaatgttctggtg
aattttcaagaaatgattcctgcctttggaattttcagactgctgatcatcatcctgata
attgtgttggacatgggatttgctctctatagaaggttctttgttcctgaagatgggtct
ccggtgtcttttgcagctcacattgcaggtggatttgctggaatgtccattggctacacg
gtgtttagctgctttgataaagcactgctgaaagatccaaggttttggatagcaattgct
gcatatttagcttgtgtcttatttgctgtgtttttcaacattttcctatctccagcaaac
tga