GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:56:25

Sequence gi568815597r:110503286_110704782 : 201497 bp : 44.75% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4073   4101   29  1  2   99   94    44 0.412   3.40
 1.02 Intr +   5466   5587  122  0  2   76   52    68 0.274   2.14
 1.03 Term +   6548   6570   23  0  2  110   38    33 0.293  -1.03
 1.04 PlyA +   9731   9736    6                              -0.45

 2.13 PlyA -  10137  10132    6                               1.05
 2.12 Term -  15503  13967 1537  1  1   99   43  1872 0.069 173.75
 2.11 Intr -  27040  26921  120  0  0   76   47    73 0.019   1.61
 2.10 Intr -  30171  30111   61  1  1   85   64    67 0.022   1.79
 2.09 Intr -  45606  45532   75  1  0   26   95   127 0.159   6.69
 2.08 Intr -  46149  46071   79  0  1   45   75    49 0.087  -1.58
 2.07 Intr -  47940  47887   54  0  0   97   75    30 0.004   1.78
 2.06 Intr -  56307  56203  105  0  0   68   53    61 0.002   1.01
 2.05 Intr -  64082  63897  186  2  0   55   47   106 0.075   3.09
 2.04 Intr -  69422  69319  104  0  2    4   75   143 0.063   4.49
 2.03 Intr -  79069  78967  103  1  1   93   81    55 0.604   5.05
 2.02 Intr -  81289  81112  178  0  1   66   75    93 0.800   5.72
 2.01 Init -  81446  81418   29  2  2   78  106     8 0.636   0.70
 2.00 Prom -  90373  90334   40                              -4.86

 3.03 PlyA -  91716  91711    6                               1.05
 3.02 Term - 101437  99998 1440  1  0   87   38  1152 0.562 100.92
 3.01 Init - 103993 103679  315  1  0   94   32   172 0.097   9.55
 3.00 Prom - 107351 107312   40                              -6.46

 4.05 PlyA - 108167 108162    6                               1.05
 4.04 Term - 112459 112321  139  0  1  110   39    70 0.019   1.74
 4.03 Intr - 117255 117176   80  0  2   84   94    16 0.004   0.15
 4.02 Intr - 125376 125239  138  0  0   66   60    44 0.479   0.06
 4.01 Init - 125757 125698   60  0  0   69   83    69 0.923   5.75
 4.00 Prom - 139287 139248   40                              -1.26

 5.02 PlyA - 139307 139302    6                               1.05
 5.01 Sngl - 171524 169797 1728  2  0   61   34  3232 0.998 308.00
 5.00 Prom - 180293 180254   40                              -2.86

 6.00 Prom + 184854 184893   40                               0.44
 6.01 Init + 200326 200434  109  0  1   86   33   174 0.921  12.08
 6.02 Term + 201066 201286  221  1  2   66   44   107 0.474   1.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 124997 124881  117  2  0   49   36    97 0.867  -0.86


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:110503286_110704782|GENSCAN_predicted_peptide_1|57_aa
MALAGFTAFRRAMVTSPDAFWSWQAKCQGHQREGKEDGDLESSLCYCGHPDARMPTA

>gi568815597r:110503286_110704782|GENSCAN_predicted_CDS_1|174_bp
atggctctggcagggttcacagccttcaggagggcaatggtcacaagcccagatgccttc
tggagctggcaggccaagtgtcagggacaccagagggagggcaaagaggatggtgacctg
gagagcagcctctgctattgtggtcatccagatgcacggatgcccacagcgtaa

>gi568815597r:110503286_110704782|GENSCAN_predicted_peptide_2|876_aa
MERNLSKSTNLMELRSFSVLPACQQFPQASHDLLKWSHPIYKTVWGFAYTQQGPRKCDRP
MFFPVLQMQHSFKQGLNVQPSDPHASWTTLAQGEKSGLQGYLEEQLINTDSPCEISAILR
EEETTVNPYYIYKLCTFQSEGQLQVLCSKVQYKVNSCNPKEKVSQNPWSISTTLTQGMRI
SPPQDVKRCQAQKVMDSPEYAEEGQIFPEQEFPKPDADLHSAMRSGVTDPPPSHKIPCRG
EHISGSPVSHIKQTTGGRVKAKAFKGVQNSSSNVTTIGRGQLVLKALTKAVHEKKTRPGY
CQTPAGTDTTVPTSGSSAALASGASRWAEAHRKLFSARQGPVTEETRKAMPDLISQSRKV
SYEQGMDVCGWKEMEVALVNFDNSDEIQEEPGYATDFDSTSPKGRPGGSSFSNGKILISE
STNHETAFSKLPGDYADPPGPEPVVLNEGNQRVIINIAGLRFETQLRTLSQFPETLLGDR
EKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPANVPIDIFADEISFYELGSEA
MDQFREDEGFIKDPETLLPTNDIHRQFWLLFEYPESSSAARAVAVVSVLVVVISITIFCL
ETLPEFREDRELKVVRDPNLNMSKTVLSQTMFTDPFFMVESTCIVWFTFELVLRFVVCPS
KTDFFRNIMNIIDIISIIPYFATLITELVQETEPSAQQNMSLAILRIIRLVRVFRIFKLS
RHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPESHFSSIPDGFWWA
VVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEKQN
IPGEIERILNSVGSRMGSTDSLNKTNGGCSTEKSRK

>gi568815597r:110503286_110704782|GENSCAN_predicted_CDS_2|2631_bp
atggaaaggaacttgtccaagagcacaaacctcatggagctgaggagcttctcagtgcta
cccgcctgccagcagttccctcaagcttcccacgatcttctgaaatggagccatcctatt
tacaaaacggtgtggggattcgcctacacgcagcagggaccccgaaagtgtgatcgcccc
atgttctttccagttctacagatgcagcactcatttaagcaaggattgaatgttcagccc
tcagatcctcatgcttcctggaccaccttagctcaaggggagaagtctggcctccaaggc
taccttgaagagcaactaatcaacactgactcgccctgtgaaatctcagccatcctcaga
gaggaagaaacaactgtgaacccctattacatctacaagctgtgcaccttccagtcagaa
ggacagcttcaggtcctttgcagcaaagtccagtacaaagtgaactcatgcaaccccaaa
gagaaggtctcccagaacccctggtcaatttccactaccctcacccaagggatgagaatt
tctccaccacaagatgttaaaagatgtcaggctcagaaagtcatggattcaccagagtat
gcagaagaaggccagatttttccagaacaagagttccctaaacctgatgcagatctgcac
tcagccatgcgctctggggtgacagatcctccaccctctcacaagatcccctgccgagga
gagcacatctcaggatcacctgtcagccacatcaagcagacaacaggaggcagggtaaag
gctaaggccttcaagggggtccagaacagcagcagcaatgtaacgactatagggagaggg
cagcttgtgctgaaggctcttaccaaggctgtccacgagaagaagacccgtccaggctac
tgtcagaccccagctggaactgacactacagtgcccaccagcggcagctcagctgccctg
gcatctggagccagcaggtgggcggaggcccatcgtaaactcttcagtgccaggcagggg
ccagtcactgaggagaccaggaaagcgatgcctgacttgatcagccagtcacgcaaggtc
tcctatgagcagggaatggatgtgtgtggctggaaagaaatggaggttgcgctggtcaat
tttgataattcagatgaaatccaagaagagccaggctatgccacagacttcgactcaacc
agcccaaaaggccggcctgggggcagctccttctccaacgggaagatcctcatcagcgaa
agcaccaaccatgagacggccttctccaagcttccgggagactatgctgaccccccaggg
cctgagccagtggtcctaaatgaaggaaaccagcgggtgatcatcaacattgctgggctg
agatttgagacccagctcagaacccttagtcagttcccagagactctcctgggagaccgg
gaaaaaaggatgcagttctttgactccatgagaaatgagtatttctttgatcggaaccgg
cccagttttgatggaatcctatattattaccaatctggtgggaaaattcggcgcccagcc
aatgttcccattgatatctttgctgatgaaatctccttctatgagctgggtagtgaggcc
atggaccagttccgggaggatgaaggcttcatcaaagaccctgaaacactgctacccacc
aatgacatccaccgtcagttctggctcctctttgagtaccctgaaagttccagcgctgcc
cgtgctgtggccgtggtctcggtgttggttgtggtcatctccatcaccatcttctgcctg
gagacactgccagagttccgggaggatagggagctaaaggtggtcagagaccccaatctc
aacatgagcaagacagtcctctcccagaccatgttcaccgaccctttcttcatggtggag
tctacctgcatcgtgtggttcaccttcgagctggtgctccggttcgtggtctgccccagc
aagactgacttcttcaggaacatcatgaacatcattgacatcatctccattatcccctac
tttgcaactctcatcacagagctagtccaggagacagagccgagtgcccaacagaacatg
tccctggccatcctgaggatcatccgcctggtgagggtcttccgcatcttcaagctctcg
cgccactccaaggggctgcagatcctcgggcaaacactgaaggcgtccatgcgggagttg
gggttgctcatcttctttctcttcattggagtcatcctcttctccagtgcagtctacttt
gctgaggtggatgagccagagtcccatttctctagcattcctgatggcttctggtgggca
gtggtcaccatgacaactgtaggctatggggacatgtgcccgaccaccccaggggggaag
attgtgggcactctgtgtgccattgcaggggtcctcaccattgccctccctgtgcctgtc
attgtctccaacttcaattacttctaccaccgggagactgagaatgaagaaaagcagaac
atcccaggagaaattgaaagaatcctcaacagtgtaggctcaagaatgggcagcacagac
tctcttaataagaccaatggtggctgttccacagagaagtctaggaaatga

>gi568815597r:110503286_110704782|GENSCAN_predicted_peptide_3|584_aa
MEAPVPIRKGKSVSGRCAARAAFPARLRRPEGLRGTRRRSLQRSRLGLSPRRQALADHCR
LLGRSQTGEIKGNLHPAQEECTEWARDPLGFAWRGAEGTERSWWVDTYDPEADHECCERV
VINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSG
GRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEY
PESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQS
TSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELA
EKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFL
FIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCA
IAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPDLKKSRSASTISK
SDYMEIQEGVNNSNEDFREENLKTANCTLANTNYVNITKMLTDV

>gi568815597r:110503286_110704782|GENSCAN_predicted_CDS_3|1755_bp
atggaggccccggtgcccatccggaagggtaaatccgtgtcggggcgttgcgcggcgcgt
gctgccttccctgcccggctgcggcgcccagaggggctgcggggcacccggcggcgcagc
ctgcagcgcagcaggcttgggctgagtccgcggcggcaagcccttgccgaccactgccgt
ctgctcggcaggtcccagaccggggagatcaaggggaacttgcaccctgctcaagaagag
tgcacagaatgggctcgggaccctctggggtttgcgtggcgcggggcggagggcacggag
aggagctggtgggtggacacctatgacccagaggcagaccacgagtgctgtgagagggtg
gtgatcaacatctcagggctgcggtttgagacccagctaaagaccttagcccagtttcca
gagaccctcttaggggacccaaagaaacgaatgaggtactttgaccccctccgaaatgag
tactttttcgatcggaaccgccctagctttgatgccattttgtactactaccagtcaggg
ggccgattgaggcgacctgtgaatgtgcccttagatatattctctgaagaaattcggttt
tatgagctgggagaagaagcgatggagatgtttcgggaagatgaaggctacatcaaggag
gaagagcgtcctctgcctgaaaatgagtttcagagacaagtgtggcttctctttgaatac
ccagagagctcagggcctgccaggattatagctattgtgtctgtcatggtgattctgatc
tcaattgtcagcttctgtctggaaacattgcccatcttccgggatgagaatgaagacatg
catggtagtggggtgaccttccacacctattccaacagcaccatcgggtaccagcagtcc
acttccttcacagaccctttcttcattgtagagacactctgcatcatctggttctccttt
gaattcttggtgaggttctttgcctgtcccagcaaagccggcttcttcaccaacatcatg
aacatcattgacattgtggccatcatcccctacttcatcaccctggggacagagttggct
gagaagccagaggacgctcagcaaggccagcaggccatgtcactggccatcctccgtgtc
atccggttggtaagagtctttaggattttcaagttgtccagacactccaaaggtctccag
attctaggtcagaccctcaaagccagcatgagagaattgggcctcctgatattctttctc
ttcataggggtcatccttttctctagtgctgtgtattttgcagaggccgatgagcgagag
tcccagttccccagcatcccagatgccttctggtgggcagtcgtctccatgacaactgta
ggctatggagacatggttccgactaccattgggggaaagatagtgggttccctatgtgcg
attgcaggtgtgttaactattgccttaccggtccctgtcattgtgtccaatttcaactac
ttctaccaccgggagacagagggagaggaacaggcccaatacttgcaagtgacaagctgt
ccaaagatcccatcctcccctgacctaaagaaaagtagaagtgcctctaccattagtaag
tctgattacatggagatccaggagggtgtaaataacagtaatgaggactttagagaggaa
aacttgaaaacagccaactgtaccttggctaacacaaactatgtgaatattaccaaaatg
ttaactgatgtctga

>gi568815597r:110503286_110704782|GENSCAN_predicted_peptide_4|138_aa
MNDIKCKFEENTSGLAAKKERRLNQQIFMGHLFKSGTRCRTLDKAPIRQYRDGHNGSLLS
RSSQSGPSSLAFCQVGFLTAQPSPPRRRNGKDRYTLVLQHQECQDDLATSSLVYLSLPCF
KDLGRSKHQSITVADTNK

>gi568815597r:110503286_110704782|GENSCAN_predicted_CDS_4|417_bp
atgaatgatatcaaatgcaaatttgaggagaacacatcaggtcttgctgccaagaaagag
agacgcctcaaccaacaaatatttatggggcacctgtttaagtcaggcaccagatgccgg
acactggacaaggcccccatcaggcagtacagagatggacacaatgggtctctgctctca
aggagttcccagtctgggccctcctctctggccttctgccaagtggggttcttaacagca
cagccttcacctccgagaaggcgcaatgggaaagacagatacacgttggttctgcaacac
caggaatgccaggatgatttagccacctcctcacttgtctacctttccctcccctgcttc
aaagacttgggtcgatcgaagcaccaaagcatcactgttgctgacactaacaagtag

>gi568815597r:110503286_110704782|GENSCAN_predicted_peptide_5|575_aa
MDERLSLLRSPPPPSARHRAHPPQRPASSGGAHTLVNHGYAEPAAGRELPPDMTVVPGDH
LLEPEVADGGGAPPQGGCGGGGCDRYEPLPPSLPAAGEQDCCGERVVINISGLRFETQLK
TLCQFPETLLGDPKRRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRIRRPVNVPIDIF
SEEIRFYQLGEEAMEKFREDEGFLREEERPLPRRDFQRQVWLLFEYPESSGPARGIAIVS
VLVILISIVIFCLETLPEFRDEKDYPASTSQDSFEAAGNSTSGSRAGASSFSDPFFVVET
LCIIWFSFELLVRFFACPSKATFSRNIMNLIDIVAIIPYFITLGTELAERQGNGQQAMSL
AILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE
ADDPTSGFSSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPVIV
SNFNYFYHRETEGEEQSQYMHVGSCQHLSSSAEELRKARSNSTLSKSEYMVIEEGGMNHS
AFPQTPFKTGNSTATCTTNNNPNSCVNIKKIFTDV

>gi568815597r:110503286_110704782|GENSCAN_predicted_CDS_5|1728_bp
atggacgagcgcctcagccttctgcgctcgccgccgccgccctcagcccgccaccgcgcc
caccctcctcagcgcccagcgagcagcggcggtgcccacacgctggtgaaccacggctac
gcggagcccgccgcaggccgcgagctgccgcccgacatgaccgtggtgcccggggaccac
ctgctggagccggaggtggccgatggtggaggggccccgcctcaaggcggctgtggcggc
ggcggctgcgaccgctacgagccgctgccgccctcactgccggccgcgggcgagcaggac
tgctgcggggagcgcgtggtcatcaacatctccgggctgcgcttcgagacgcagctgaag
accctttgccagttccccgagacgctgctgggcgaccccaagcggcgcatgaggtacttc
gacccgctccgcaacgagtacttcttcgaccgcaaccggcccagcttcgacgccatcctc
tactactatcagtccgggggccgcatccgccggccggtcaacgtgcccatcgacattttc
tccgaggagatccgcttctaccagctgggcgaggaggccatggagaagttccgcgaggac
gagggcttcctgcgggaggaggagcggcccttgccccgccgcgacttccagcgccaggtg
tggctgctcttcgagtaccccgagagctccgggccggcccggggcatcgccatcgtgtcc
gtgctggtcatcctcatctccattgtcatcttctgcctggagacgctgccggagttccgc
gacgagaaggactaccccgcctcgacgtcgcaggactcattcgaagcagccggcaacagc
acgtcggggtcccgcgcaggagcctccagcttctccgatcccttcttcgtggtggagacg
ctgtgcatcatctggttctccttcgaactgctggtgcggttcttcgcttgtcctagcaaa
gccaccttctcgcgaaacatcatgaacctgatcgacattgtggccatcattccttatttt
atcactctgggtaccgagctggccgaacgacagggcaatggacagcaggccatgtctctg
gccatcctgagggtcatccgcctggtaagggtcttccgcatcttcaagctgtcgcgccac
tccaaggggctgcagatcctcgggcaaacgctgaaggcgtccatgcgggagctgggattg
ctcatcttcttcctctttattggggtcatccttttctccagcgcggtctactttgccgag
gcagacgaccccacttcaggtttcagcagcatcccggatgccttctggtgggcagtggta
accatgacaacagtgggttacggcgatatgcacccagtgaccatagggggcaagattgtg
ggatctctctgtgccatcgccggtgtcttgaccatcgcattgccagttcccgtgattgtt
tccaacttcaattacttctaccaccgggagacagaaggggaagagcaatcccagtacatg
cacgtgggaagttgccagcacctctcctcttcagccgaggagctccgaaaagcaaggagt
aactcgactctgagtaagtcggagtatatggtgatcgaagaggggggtatgaaccatagc
gctttcccccagacccctttcaaaacgggcaattccactgccacctgcaccacgaacaat
aatcccaactcttgtgtcaacatcaaaaagatattcaccgatgtttaa

>gi568815597r:110503286_110704782|GENSCAN_predicted_peptide_6|109_aa
MVEGKEEHVLSYMNGSRQRENEKAVKVETPDKTINSCAQCKLSVDLPFWSLEDGGPLLTA
PLGGAPVGTLCGGSDPTFPFHTVLAEVLYERPTPAANFCLGIQVFPYIF

>gi568815597r:110503286_110704782|GENSCAN_predicted_CDS_6|330_bp
atggtggaaggcaaggaggagcacgtcctgtcttacatgaatggcagcaggcaaagagag
aatgagaaagctgtaaaagtggaaacacctgataaaaccatcaactcttgtgcacagtgc
aagctgtctgtggatctaccattctggagtctggaggacggtggccctcttctcacagct
ccactaggtggtgccccagtagggactctgtgtgggggctctgaccccacatttcccttc
cacactgtcctagcagaggttctgtatgagaggcccacccctgcagcaaacttctgcctg
ggcatccaggtgtttccttacatcttctga