GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:52:07

Sequence gi568815593r:63860454_64061719 : 201266 bp : 37.07% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -     30     25    6                               1.05
 1.04 Term -   1680   1632   49  2  1  121   42    61 0.236   0.60
 1.03 Intr -   3525   3461   65  0  2   93  116    63 0.243   6.20
 1.02 Intr -  27154  26924  231  1  0   80   93   192 0.440  15.95
 1.01 Init -  36339  36253   87  0  0   11  100    80 0.148   2.19
 1.00 Prom -  42758  42719   40                              -7.35

 2.00 Prom +  47615  47654   40                              -3.55
 2.01 Init +  51755  51773   19  1  1  102   66    26 0.215   2.09
 2.02 Intr +  61073  61186  114  0  0   72   83    67 0.613   4.10
 2.03 Intr +  65381  65521  141  0  0   66   82   108 0.724   7.40
 2.04 Term +  79798  79991  194  2  2   -2   54   232 0.046   7.40
 2.05 PlyA +  80098  80103    6                               1.05

 3.00 Prom +  82073  82112   40                             -10.84
 3.01 Init +  82315  83220  906  0  0   86  -13   236 0.030   7.54
 3.02 Intr +  86398  86519  122  0  2  117  123     8 0.067   5.57
 3.03 Intr +  92066  92219  154  2  1   -2   91    81 0.059  -1.45
 3.04 Intr +  96421  96444   24  0  0  116  110    -1 0.306   2.20
 3.05 Term +  98616  98948  333  2  0   32   41   261 0.410   9.43
 3.06 PlyA +  99468  99473    6                              -0.45

 4.03 PlyA -  99628  99623    6                               1.05
 4.02 Term -  99827  99718  110  0  2  103   42    89 0.783   3.49
 4.01 Init - 101266 100018 1249  1  1   90   84  1291 0.906 121.65
 4.00 Prom - 114949 114910   40                              -4.65

 5.00 Prom + 124841 124880   40                              -5.15
 5.01 Init + 125162 125229   68  1  2   66   73   112 0.943   8.10
 5.02 Intr + 128277 128403  127  0  1   92   49    48 0.254   1.06
 5.03 Intr + 170331 170439  109  2  1   47  111    49 0.014   2.04
 5.04 Intr + 173376 173451   76  1  1   61   62    59 0.222  -1.75
 5.05 Term + 177408 177675  268  0  1   27   45   220 0.285   5.58
 5.06 PlyA + 177906 177911    6                               1.05

 6.02 PlyA - 178770 178765    6                               1.05
 6.01 Term - 191177 191056  122  0  2  101   50   113 0.610   6.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  79782  79991  210  2  0   10   54   265 0.883  10.24
S.002 Term - 158500 158404   97  0  1   88   44    92 0.805   1.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:63860454_64061719|GENSCAN_predicted_peptide_1|143_aa
MIVNACYVQELYLPFTYTVAFTPYHTDNKKGYTRQQFCHESTPNKGDRVIHNLTRTPYCC
VRFPLAGMGLHILYLSQLASNLELFKRGKGRGEQRKEEVTCGMLRKETATITPNFNNHYP
DQQSLISSSFVALKTIRLGTKQM

>gi568815593r:63860454_64061719|GENSCAN_predicted_CDS_1|432_bp
atgattgtgaatgcctgctatgtgcaggaactatacttacccttcacctacactgtcgca
tttactccttaccacactgacaataagaaagggtacactcgtcagcagttttgccacgag
agtacaccaaacaaaggagacagggtcattcataacctgacgcgtacaccctactgctgt
gtccggtttccattggctggaatgggacttcacattctgtatttgtcccagttggctagc
aacttagaactttttaaaagaggcaaaggcagaggagaacaaaggaaggaagaagtaact
tgtggaatgctcagaaaggaaactgccaccatcaccccaaacttcaacaaccactatcct
gatcagcagtcactaatatcaagctcttttgtagccttaaaaaccatcagactcggtacc
aagcagatgtaa

>gi568815593r:63860454_64061719|GENSCAN_predicted_peptide_2|155_aa
MQTIPVLSEVWGTMWRTVWRREGTQCYGGTEISVEPEHRVEGGSDVFRSGMSGVWDTKGQ
VQDLFVKLPFMLQALSPTPSNPSSLEENTRVAETIHYINNTSGPGTANECTLHWWFKKFC
KGDKSLEDEEHSGWPSEVDNDQLTAIIKADPLTTT

>gi568815593r:63860454_64061719|GENSCAN_predicted_CDS_2|468_bp
atgcagaccatccctgtattgtctgaggtgtggggaacaatgtggagaacggtctggaga
agagagggaacacaatgttatggaggaacagaaatttcagtagagccagaacacagagta
gaaggtggaagtgatgttttcagatctggaatgtctggtgtctgggacaccaagggtcag
gtacaagatctctttgtcaaactgccatttatgctgcaggccctgagccctaccccatcc
aacccctcatcactggaggaaaacacaagggtagcagaaacaattcactacatcaacaac
acatccggcccaggaactgctaatgaatgtaccttgcactggtggttcaagaagttttgc
aagggagacaagagccttgaagatgaggagcatagtggctggccatcagaagttgacaat
gaccaattgacagcaatcatcaaagctgatcctcttacaactacatga

>gi568815593r:63860454_64061719|GENSCAN_predicted_peptide_3|512_aa
MAILPKVIYRLNAIPIKLPMTFFTELEKTTLKFIWNQKRARITKSILSQKNKAGGITLPD
FKLCYKATVTKTAWYWYQNRDIDQWNRTEPSEITLHTYNCLIFDKPEKNKKWGKDSLFNK
WFWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDF
MSKTPKAMATKDKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRIY
NELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTTIRYHL
TPVYSRIYQSTAYLKKSLTAENMYEATVTLWCIPSARHLTETRRQGSGGNAGSYNCAAQF
LTGHGQNRFMTQGFGTPDVDYMPEFQGHSNTYDLASKSVGLQQMQRVLGHAKQNYSPIQK
GQERELGGKILHRKDKIALSGFTGGASWSLGHARPGEPFLFAAPACRPFKAFLVSPIPRV
PRHLAPLAKAKTSGVYPRFRAPQSVGGGTQIL

>gi568815593r:63860454_64061719|GENSCAN_predicted_CDS_3|1539_bp
atggccatactgcccaaggtaatttacagactcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cgcatcaccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactttgctacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataacgctgcatacctacaactgt
ctgatctttgacaaacctgagaaaaacaagaaatggggaaaggattccctatttaataaa
tggttctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaatcaattcaagatggattaaagatttaaacgttagacctaaaaccata
aaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttc
atgtccaaaacaccaaaagcaatggcaacaaaagacaaaattgacaaatgggatctaatt
aaactcaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
aaatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaag
gacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaaaaa
tgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaataagataccatctc
acaccagtttactccagaatttaccaatctactgcctacctaaaaaaaagtttaactgca
gaaaacatgtatgaagccactgtgactctttggtgtattcccagtgctagacatttaaca
gaaactcggagacaaggctcaggtggcaatgctggctcatataactgtgcggcccagttt
ctaacaggccatggacagaacagattcatgacccaggggtttgggacccctgatgtagat
tatatgccagagtttcagggtcatagcaatacctacgatttggcctcaaaaagtgttggg
ttacagcaaatgcagcgagtgttgggacacgctaaacagaattattccccgatccaaaaa
ggacaagagcgtgaattaggaggaaaaattctacatcgtaaggataaaattgctctttca
ggttttactgggggagccagctggagccttgggcacgcgcgccctggggaacctttcctc
tttgccgcccctgcgtgtcgcccctttaaagccttcttggtctctccaatcccaagagtt
ccgcggcatcttgcgccactggctaaggcaaaaacctcaggtgtctacccgcgcttcagg
gcgccccagagcgtaggcggaggaacccagatcctgtaa

>gi568815593r:63860454_64061719|GENSCAN_predicted_peptide_4|452_aa
MDVLSPGQGNNTTSPPAPFETGGNTTGISDVTVSYQVITSLLLGTLIFCAVLGNACVVAA
IALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCC
TSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLISIPPMLGWRTPED
RSDPDACTISKDHGYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVKKVEKTGADT
RHGASPAPQPKKSVNGESGSRNWRLGVESKAGGALCANGAVRQGDDGAALEVIEVHRVGN
SKEHLPLPSEAGPTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLP
FFIVALVLPFCESSCHMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKWPFV
QRRPSGGALRAQEIQRVCEKRHWLRLRLYHQF

>gi568815593r:63860454_64061719|GENSCAN_predicted_CDS_4|1359_bp
atggatgtgctcagccctggtcagggcaacaacaccacatcaccaccggctccctttgag
accggcggcaacactactggtatctccgacgtgaccgtcagctaccaagtgatcacctct
ctgctgctgggcacgctcatcttctgcgcggtgctgggcaatgcgtgcgtggtggctgcc
atcgccttggagcgctccctgcagaacgtggccaattatcttattggctctttggcggtc
accgacctcatggtgtcggtgttggtgctgcccatggccgcgctgtatcaggtgctcaac
aagtggacactgggccaggtaacctgcgacctgttcatcgccctcgacgtgctgtgctgc
acctcatccatcttgcacctgtgcgccatcgcgctggacaggtactgggccatcacggac
cccatcgactacgtgaacaagaggacgccccggcgcgccgctgcgctcatctcgctcact
tggcttattggcttcctcatctctatcccgcccatgctgggctggcgcaccccggaagac
cgctcggaccccgacgcatgcaccattagcaaggatcatggctacactatctattccacc
tttggagctttctacatcccgctgctgctcatgctggttctctatgggcgcatattccga
gctgcgcgcttccgcatccgcaagacggtcaaaaaggtggagaagaccggagcggacacc
cgccatggagcatctcccgccccgcagcccaagaagagtgtgaatggagagtcggggagc
aggaactggaggctgggcgtggagagcaaggctgggggtgctctgtgcgccaatggcgcg
gtgaggcaaggtgacgatggcgccgccctggaggtgatcgaggtgcaccgagtgggcaac
tccaaagagcacttgcctctgcccagcgaggctggtcctaccccttgtgcccccgcctct
ttcgagaggaaaaatgagcgcaacgccgaggcgaagcgcaagatggccctggcccgagag
aggaagacagtgaagacgctgggcatcatcatgggcaccttcatcctctgctggctgccc
ttcttcatcgtggctcttgttctgcccttctgcgagagcagctgccacatgcccaccctg
ttgggcgccataatcaattggctgggctactccaactctctgcttaaccccgtcatttac
gcatacttcaacaaggactttcaaaacgcgtttaagaagatcattaagtggccctttgtg
caaaggagacccagcggaggagcgttgagagcccaggaaattcagagagtttgtgagaag
cgacattggctcagacttcgcctgtatcatcagttttga

>gi568815593r:63860454_64061719|GENSCAN_predicted_peptide_5|215_aa
MTAEGKGQQLKTAGELRALALERFPSEVHSFCQHTPDTLEPACPTHGPAGCMQHRMALKR
AQHKCLHKNQSYIQCEDVRCEIQPQPHTGYQARCAKMLIMTGQTWSTPRTDLLDSKGKGM
ASQPNLRSWNSLVGSEEDKKMRESLELPRGLLNGCDQNADSDMDSEVQAEELSDGNEELI
GNWSKGHFCYALAKNLEALCPCPTDLWKFEVESDD

>gi568815593r:63860454_64061719|GENSCAN_predicted_CDS_5|648_bp
atgacagctgaaggaaaaggacagcaactgaagacagctggagagctgagggctctggca
ttagaaaggtttccatctgaggtccattccttttgtcagcatacccctgacactctagaa
ccagcttgtccaacccacggccctgcaggctgcatgcagcacaggatggctttgaaacga
gcccaacacaaatgtttacacaaaaatcagtcttacatacaatgtgaagatgtcagatgt
gagattcagccacagccacatacaggttatcaggcaaggtgtgcaaaaatgctgatcatg
acaggccaaacatggtctacaccgagaactgatcttctggactccaaaggcaagggtatg
gcttcccaaccaaacttaagaagttggaacagtttggttggctcagaagaagacaagaag
atgagggaaagtttagaacttcctagaggtttgttaaatggttgtgaccaaaatgctgat
agtgatatggacagtgaagtccaggctgaggagctctcagatggaaatgaggaactgatt
gggaactggagcaaaggtcacttttgttatgctttagcaaagaacttggaggcattgtgc
ccctgccctacggatctgtggaagtttgaagtagagagtgatgattag

>gi568815593r:63860454_64061719|GENSCAN_predicted_peptide_6|40_aa
XLFIIRPVMQKFFSAALPAGPHCPGPHGPGLSAVQSLTQL

>gi568815593r:63860454_64061719|GENSCAN_predicted_CDS_6|123_bp
nagctgttcattatcagaccagtaatgcagaaatttttcagtgctgctttgccagctgga
ccacactgtccagggcctcatggtccagggctttcagctgtccagagccttactcagctc
tga