GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:51:29

Sequence gi568815586r:90853525_91054742 : 201218 bp : 35.88% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  11651  11714   64  1  1   81   50    54 0.101   2.26
 1.02 Intr +  21248  21282   35  0  2   57  113    35 0.143  -0.08
 1.03 Intr +  23347  23617  271  0  1   19  119   179 0.856  10.29
 1.04 Intr +  24108  24413  306  1  0   56   71   134 0.557   4.00
 1.05 Intr +  24813  24905   93  1  0   46  108    61 0.866   2.92
 1.06 Intr +  25481  25988  508  0  1   24   39   328 0.606  12.60
 1.07 Intr +  26247  26439  193  0  1   58   72    93 0.406   3.27
 1.08 Intr +  33247  33288   42  0  0   54  115    57 0.227   2.52
 1.09 Term +  60175  60531  357  0  0   68   49   161 0.055   3.73
 1.10 PlyA +  61969  61974    6                               1.05

 2.04 PlyA -  64037  64032    6                               1.05
 2.03 Term -  79641  79023  619  2  1   19   37   257 0.591   6.62
 2.02 Intr -  82552  82402  151  2  1   78   88   112 0.554   8.50
 2.01 Init -  85592  85568   25  2  1   97   94     5 0.578   1.74
 2.00 Prom -  93821  93782   40                              -4.85

 3.02 PlyA -  94740  94735    6                               1.05
 3.01 Sngl - 101218  99998 1221  1  0   83   42  1193 0.955 109.75
 3.00 Prom - 101689 101650   40                              -4.75

 4.14 PlyA - 102151 102146    6                               1.05
 4.13 Term - 110802 110632  171  0  0   90   28   118 0.776   2.84
 4.12 Intr - 116615 116520   96  2  0   52   91    58 0.762   1.79
 4.11 Intr - 118478 118276  203  0  2   96  106   165 0.999  17.18
 4.10 Intr - 119456 119298  159  0  0  106   16    88 0.842   2.44
 4.09 Intr - 124286 124191   96  0  0   24   45   128 0.461   1.16
 4.08 Intr - 124738 124564  175  1  1  100   77   187 0.580  17.39
 4.07 Intr - 125835 125663  173  1  2   21   -2   153 0.323  -1.66
 4.06 Intr - 130024 129867  158  0  2   68   49    71 0.366  -0.07
 4.05 Intr - 130792 130688  105  0  0    8   77   144 0.494   3.71
 4.04 Intr - 131682 131583  100  1  1   75   72   117 0.499   7.05
 4.03 Intr - 134809 134685  125  0  2   87   27    85 0.117   1.61
 4.02 Intr - 144897 144818   80  0  2   58  100     1 0.160  -4.27
 4.01 Init - 149041 148877  165  1  0   65   74   207 0.902  16.68
 4.00 Prom - 157264 157225   40                              -3.65

 5.02 PlyA - 157560 157555    6                               1.05
 5.01 Term - 197994 197822  173  1  2   93   41   136 0.685   6.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:90853525_91054742|GENSCAN_predicted_peptide_1|622_aa
MGKKNNPYEDMLRFNAYEILRTCRQSIVGPCDHGKGNDQAFLGLLDTGSELTLTPGEPKC
HCGPPVKVGAYGGQVINGVLAQVKLTASPVCPQTHPVISPVPECIIGIDILSSWQNPHIG
SLTGSTLVHYIDDIVLIGSSEQEVANTLDLLLRHLRVRGWEINLTKIHRTSISVKFLGVQ
WCGACQDIPSKVKDRLMHLAPSTTKKEAQHLVGLFDFQRQHIPHLASHKVGRAQKHFIIK
WKWYVHDRAQGGPEGTTTPVLAQWTHKQSSHGGRDGGYAWAQQHGFPVTKADLVTATAEC
PICLQQSPTLTPRYGTNPCGDQTATWWQVDYIGPLPSWKGQRFFLTGIDIYSGYGFAYHA
RNASAKTTILVLMECLIHYHVIPHSIASDQGTYFMAKEVQQGAHAHGINWSYHVPHYLEA
AGLIERGLSSGGRNAAARRNNNDSIKLKVKIDTWTLGLLLPLSEQAKKGVTVLAGVIDPK
MKSVYYSIMEDPVDDSKDVRNDRKDMLMLEMGSHGLGQLCCYDFEGYSPPPGFFHGLALS
FCSFSRCMVQAVIKSTTQRSGGWWPFSHSSTSQCSSVDSVWRLHSNCTFPFHIALAEVVH
EDSTPAANFCLTSRCFHTSSEI

>gi568815586r:90853525_91054742|GENSCAN_predicted_CDS_1|1869_bp
atggggaagaaaaataatccatatgaagatatgttgcgtttcaatgcctatgagatacta
agaacttgcagacagtctattgtgggaccttgtgatcacggaaagggaaatgatcaggca
tttctgggactactagacactggctctgagctgaccttgactccaggggaaccaaaatgt
cactgtggtcctccagttaaagtaggggcttatggaggtcaggtaattaatggggtttta
gctcaggtcaaacttacagcgagtccagtgtgtccccagactcatcctgttatttcccca
gtgccggaatgcataattggcatagacatacttagcagctggcagaacccccacattggc
tccctgactggtagcacactggtccattacattgatgacattgtgttgattggatccagt
gagcaggaagtagcaaacacactggacttattgctgagacatttgcgtgtcagaggatgg
gaaataaatctgactaaaattcatagaacttctatctcagtaaaatttctaggagttcag
tggtgtggggcctgtcaagatattccttctaaggtgaaggataggttgatgcatttggcc
ccttctacaaccaagaaagaggcacaacatctagtgggcctatttgattttcagagacaa
cacattcctcatttggctagccataaagtgggtcgtgcacagaaacatttcatcatcaaa
tggaagtggtatgtacatgacagggctcaaggaggtcctgaaggcacaaccaccccagtc
cttgcccaatggacccataaacaaagtagccatggtggcagggatggaggttatgcatgg
gctcagcaacatggttttccagtcaccaaagctgacctggttactgccactgctgagtgc
ccaatttgcctgcagcagagcccaacactgacccctcgatatggcaccaatccttgtggt
gatcagacagctacctggtggcaggttgattatattggacctcttccatcatggaaagga
cagagatttttcctcactggaatagacatttactctggatatgggtttgcctaccatgca
cgcaatgcgtctgccaagactaccatccttgtactcatggaatgccttatccactatcat
gttattccacacagcattgcctctgaccaaggcacttactttatggctaaagaagtgcag
cagggggctcatgctcatggaattaactggtcttaccatgttccccattatctggaagca
gctggattgatagaaagaggtcttagttctggaggaaggaatgctgccgccaggagaaac
aacaatgattccattaaactgaaagttaagattgacacctggacacttgggctcctccta
cctttaagtgaacaggctaagaagggagttacagtgttggctggggtgatcgacccaaag
atgaaatcagtctactactccataatggaagatccagtagatgattccaaagatgtacgg
aatgacagaaaggacatgctgatgctagagatgggttcccatggtcttgggcagctctgc
tgctatgactttgaagggtacagcccccctcctggcttctttcatgggctggcattgagt
ttctgcagcttttccaggtgcatggtacaagctgtcattaaatctaccactcagaggtct
ggaggatggtggcctttttctcacagctccactagtcagtgctccagtgtggactctgtg
tggaggctccactccaattgcacatttcccttccacattgccctagcagaagttgtccat
gaggactccacccctgcagcaaacttctgcttgacatcaaggtgtttccacacatcctct
gaaatctag

>gi568815586r:90853525_91054742|GENSCAN_predicted_peptide_2|264_aa
MGSSGHWAEPTQMKRNQKTKPGNMTKQSFLTPPKNHTSSPAMDPNQEEIPDLPEKEFRRC
RKSILKAQHPFMIKTLSKIDKQGTYLNIIKTICDKPIVNTILNGENLKAFSLRTGTRQGC
PLSLLLFNILLEVLARAIRQEKEIKGIQISNEEVKLSLFADDMIIYLENPKDSSRKLLEL
KKEFSKVSGYKINVHKLVALLYTNSDQKENQIKNSTPFTIAAEKIKYLGICLMKELKDLY
KENYKTLLKEIIDNTNKCKHIPCS

>gi568815586r:90853525_91054742|GENSCAN_predicted_CDS_2|795_bp
atgggtagcagtggtcactgggcagagcctacccaaatgaaaaggaaccagaaaaccaag
cctggtaatatgacaaaacaaagcttcttgacaccccccaaaaatcacactagttcacca
gcaatggatccaaaccaagaagaaatccctgatttacctgaaaaagaattcaggagatgc
agaaaaagcattctaaaagcacagcatccctttatgattaaaactcttagcaaaatcgac
aaacaagggacataccttaatataataaaaaccatctgtgacaaacccatagtcaacaca
atactgaatggggaaaacttgaaagcattctctctgagaactggaacaagacaagggtgc
ccactctcactactcctcttcaacatactactggaagtcctagccagagcaatcagacaa
gagaaagaaataaaaggcatccaaatcagcaacgaggaagtcaaactatcactgtttgct
gatgatatgatcatttaccttgaaaaccctaaggactcctccagaaagctcctagaactg
aaaaaagaattcagcaaagtttctggatacaagattaatgtacacaaactagtagctctt
ctatacaccaacagtgaccaaaaagagaatcaaatcaagaactcaaccccttttacaata
gctgcagaaaaaataaaatatttaggaatatgcctaatgaaggagttgaaagacctctac
aaggaaaactacaaaacactgctgaaagaaatcatagacaacacaaacaaatgtaaacac
atcccatgctcatag

>gi568815586r:90853525_91054742|GENSCAN_predicted_peptide_3|406_aa
MTQTLDTREDPLNLGGGGGGGCGCGWAHSASLSSWSSCHRRRPGAPAYNRPHRYSPKTEY
GPPRKQPKQQHGPGFWFQPPVCSNWGCWGGPWRPPPPGFWKFPCPVQVFRVYGLHPLCFC
CCSCWSGSWNPGWVKPPGRKKRWGRRGRGLRHHPRHSYPRSPPADVSTLPRPVKLYEWRE
PGMRAPPNTTQFIMNQIYEDMRQQEKVERQQEALRAQKATVSGEASPARSSGNDAPPGGS
KETWGLQETLYGFVQNPSLAFSPNPEENQSLAPLLVEEEEEKKNDDEEEYDQEVCDAKEA
SEEEEEVEDEEEEVEDEEEEEVEEAEYVEEGEEELEEEELEEEEEVLEENEQRGEEFHLP
LEMPLSIFVEAEEKRENFISCTFLNPEQIIPKVPQESLFMAQDFNC

>gi568815586r:90853525_91054742|GENSCAN_predicted_CDS_3|1221_bp
atgactcagaccctcgacacaagggaagaccctctgaacctgggcggcggtggcggcggc
ggctgtggctgtggctgggcacactcggcctccttgagctcctggtcgtcctgccatcga
aggcgcccgggtgctccagcgtacaatagaccgcaccgatatagccccaagaccgagtat
gggcccccaaggaagcagccgaagcaacagcacggcccgggcttttggttccaaccaccc
gtgtgctctaactgggggtgctggggagggccctggcgcccaccccctccaggattctgg
aaattcccctgcccggtgcaagtgtttcgggtgtatggcctgcaccctctctgcttttgc
tgctgctcctgctggagcgggtcctggaaccctggctgggtgaagcccccaggcaggaag
aagcgctggggccgcagaggccgcggcctgcgccaccaccctcgccactcctacccgcgg
agcccgccagcggatgtgagcacgctgccgcggccggtcaagctgtatgagtggagagag
cctggcatgcgagcgccgcccaacaccacccaattcatcatgaaccagatctacgaggac
atgaggcagcaggagaaggtggagcgtcagcaggaggcgctgcgggcgcagaaggccacg
gtgagcggcgaggcctccccagccagatcctccggaaacgacgcgccccctggcggcagc
aaggaaacctggggactgcaggaaactctgtatggctttgtgcagaatccctctctagca
ttcagtcccaacccagaggaaaaccagtctcttgccccgctgctggtggaagaagaggag
gagaagaaaaatgatgatgaggaggagtatgaccaggaggtgtgtgatgcaaaggaggcg
agcgaggaggaagaagaggtcgaagatgaggaggaagaggtcgaagatgaggaggaagaa
gaggtcgaagaggctgaatatgtggaggagggagaggaggagctggaagaggaggagctg
gaagaggaagaggaggtcctggaggagaacgagcagagaggggaagaatttcacttgcct
ctggaaatgcctttatcaatcttcgtagaggctgaagaaaagagagagaactttataagc
tgcacttttttaaacccagagcagataattcccaaagtgccacaggaatccctgttcatg
gcacaggactttaactgttag

>gi568815586r:90853525_91054742|GENSCAN_predicted_peptide_4|601_aa
MKTLAGLVLGLVIFDAAVTAPTLESINYDSETYDATLEDLDNLYNYENIPVDKVENIYDP
LFSILEASFRPNNAIRVLYITHYIVITNQLESRIKKLLLMASEESFPLIGHFKYHFSMMR
TSEIFLEHRSADVYDSSPHDLGRGPSGDPYWGQLADQTHNGPWTLLIGIVALTNAAAETP
VFLLDHKEDQGSSARKYKKSRSWFQANQRSQLRRVRVVKEPFPRKPDTHVFSLAAALVAF
NWPTANKEGWKKAKGHIGVVKGKSGISGDTTRTLGHKKWVLDVAIPIAWSKFSAQAYETV
REIEIATVMPSGNRELLTPPPQPEKAQEEEEEEESTPRLIDGSSPQEPEFTGVLGPHTNE
EQRVIDEQDKIFASEIRPQQFKGIRDDEDEDDDFPTCLLCTCISTTVYCDDHELDAIPPL
PKNTAYFYSRFNRIKKINKNDFASLSDLKRIDLTSNLISEIDEDAFRKLPQLRELVLRDN
KIRQLPELPTTLTFIDISNNRLGRKGIKQEAFKDMYDLHHLYLTDNNLDHIPLPLPENLR
ALHLQNNNILEMHEDTFCNVKNLTYIRKALEDIRLDGNPINLSKTPQAYMCLPRLPVGSL
V

>gi568815586r:90853525_91054742|GENSCAN_predicted_CDS_4|1806_bp
atgaagacattagcaggacttgttctgggacttgtcatctttgatgctgctgtgactgcc
ccaactctagagtccatcaactatgactcagaaacctatgatgccaccttagaagacctg
gataatttgtacaactatgaaaacatacctgttgataaagttgagaatatctatgatcca
ttgttttctatattagaagcaagttttagacccaacaatgccatcagagtgctatatatt
acccactatatcgtcatcactaatcagctagagtcaagaataaagaagctgctcctaatg
gcttcagaagaatcatttcctctcattgggcattttaaatatcacttttccatgatgaga
acaagtgaaatctttttagaacacaggtcagcagatgtttatgactccagtccccatgat
ctgggtcgaggtcccagtggggatccatactggggacagcttgctgaccaaacacacaat
ggtccctggaccctgctgatcggaatagttgcactcaccaatgcagcagcagaaacacca
gttttcctcttagaccacaaagaggaccaaggaagctcagcccggaagtataagaaaagc
agaagctggtttcaagcaaaccaacgctctcaactccgaagagtcagggttgttaaagag
ccctttcccagaaagcctgacacccatgtctttagtctggcagccgcactagttgctttt
aactggccaacagcaaataaagaagggtggaaaaaagcaaaaggccatattggtgtggtt
aagggaaagtctgggatttctggggataccacaaggacactgggccacaaaaagtgggtc
ctggatgtcgccatcccaattgcctggagcaaattttcagcccaagcttacgagaccgtc
agagaaattgaaatagccacagtgatgccttcagggaacagagagctcctcactccaccc
ccacagcctgagaaggcccaggaagaggaagaggaggaggaatctactcccaggctgatt
gatggctcttctccccaggagcctgaattcacaggggttctggggccacacacaaatgaa
gaacagagagtaattgatgagcaggataaaatctttgcctctgagattaggccacagcag
ttcaaggggataagagatgatgaggatgaagatgatgactttccaacctgtcttttgtgt
acttgtataagtaccaccgtgtactgtgatgaccatgaacttgatgctattcctccgctg
ccaaagaacaccgcttatttctattcccgctttaacagaattaaaaagatcaacaaaaat
gactttgcaagcctaagtgatttaaaaaggattgatctgacatcaaatttaatatctgag
attgatgaagatgcattccgaaaactgcctcaacttcgagagcttgtcctgcgtgacaac
aaaataaggcagctcccagaattgccaaccactttgacatttattgatattagcaacaat
agacttggaaggaaagggataaagcaagaagcatttaaagacatgtatgatctccatcat
ctgtacctcactgataacaacttggaccacatccctctgccactcccagaaaatctacga
gcccttcacctccagaataacaacattctggaaatgcacgaagatacgttctgcaatgtt
aaaaatttgacttatattcgtaaggcactagaggacattcgattggatggaaaccctatt
aatctcagcaaaactcctcaagcatacatgtgtctacctcgtctgcctgttgggagcctt
gtctaa

>gi568815586r:90853525_91054742|GENSCAN_predicted_peptide_5|57_aa
XVNVSVICPSPSMLPAERDSFSYGPHLRYLRLDGNEIKPPIPMALMTCFRLLQAVII

>gi568815586r:90853525_91054742|GENSCAN_predicted_CDS_5|174_bp
ngtgtgaatgtctctgtaatatgtcccagcccatccatgctgcctgcagaacgagattcc
ttcagttatggacctcatcttcgctacctccgtctggatggaaatgaaatcaaaccacca
attccaatggctttaatgacctgcttcagacttctgcaggctgtcattatttaa