GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:50:27

Sequence gi568815582f:29563729_29764928 : 201200 bp : 48.61% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -   1778   1623  156  0  0   87  110   128 0.979  14.88
 1.02 Intr -   2521   2358  164  0  2   88   38    74 0.666   2.02
 1.01 Init -  10051  10044    8  1  2  106   68    23 0.411   1.15
 1.00 Prom -  18043  18004   40                              -5.66

 2.00 Prom +  21781  21820   40                              -7.36
 2.01 Init +  31257  31412  156  2  0   94   78   310 0.865  30.11
 2.02 Term +  36973  37203  231  0  0   58   44   148 0.489   3.87
 2.03 PlyA +  39909  39914    6                               1.05

 3.00 Prom +  40850  40889   40                              -5.36
 3.01 Init +  42044  42143  100  1  1   72   46   152 0.943   7.82
 3.02 Term +  43468  43697  230  2  2   39   46   206 0.533   8.29
 3.03 PlyA +  43943  43948    6                               1.05

 4.02 PlyA -  45227  45222    6                               1.05
 4.01 Sngl -  49912  49247  666  1  0   82   44  1286 0.928 119.78
 4.00 Prom -  54528  54489   40                              -5.56

 5.10 PlyA -  54964  54959    6                              -1.75
 5.09 Term -  55200  55057  144  0  0   85   44   158 0.993   9.01
 5.08 Intr -  59145  58990  156  0  0  108   63   195 0.418  19.21
 5.07 Intr -  65201  65032  170  0  2   73   -8   178 0.641   6.37
 5.06 Intr -  65700  65606   95  2  2   71   52    44 0.373  -1.29
 5.05 Intr -  68420  68098  323  2  2   35   46   144 0.303  -0.44
 5.04 Intr -  69677  69615   63  2  0   97  121    79 0.762  11.01
 5.03 Intr -  72600  72482  119  1  2  102   68    96 0.992   9.18
 5.02 Intr -  72802  72663  140  0  2   59   92   102 0.814   7.81
 5.01 Init -  78514  78507    8  1  2  114   91     0 0.860   3.40
 5.00 Prom -  87096  87057   40                              -6.76

 6.00 Prom +  96876  96915   40                              -5.56
 6.01 Sngl + 100001 101203 1203  1  0   73   42   968 0.996  84.55
 6.02 PlyA + 101765 101770    6                               1.05

 7.00 Prom + 108459 108498   40                              -7.16
 7.01 Init + 115470 115482   13  2  1  109   98     9 0.147   3.97
 7.02 Intr + 130936 131471  536  2  2  129   48   743 0.926  67.04
 7.03 Intr + 133217 133399  183  1  0   74   94   203 0.646  19.48
 7.04 Term + 133471 133683  213  0  0  111   37   310 0.936  25.43
 7.05 PlyA + 133893 133898    6                               1.05

 8.08 PlyA - 138908 138903    6                               1.05
 8.07 Term - 144496 144378  119  2  2   84   48    86 0.812   2.90
 8.06 Intr - 149027 148949   79  2  1   51   99    36 0.045   0.12
 8.05 Intr - 180210 180068  143  1  2   68   46    87 0.157   2.57
 8.04 Intr - 180819 180726   94  0  1   69   93    12 0.186  -0.66
 8.03 Intr - 181223 180885  339  2  0  109   80   234 0.083  20.37
 8.02 Intr - 185506 185303  204  1  0    4   71   165 0.272   5.80
 8.01 Init - 185549 185529   21  2  0   60  113    56 0.294   3.71

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 197383 197483  101  2  2   83   54    95 0.915   3.89


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:29563729_29764928|GENSCAN_predicted_peptide_1|110_aa
MRRTDSASADPGNLKYSSSRDRGGSSSYGLQPSNSAVVSRQRHDDTRVHADIQNDEKGGY
SVNGGSGENTYGRKSLGQELRVNNVTSPEFTSVQHGSRALATKDMRKSQX

>gi568815582f:29563729_29764928|GENSCAN_predicted_CDS_1|330_bp
atgcgcagaactgatagtgcatcagctgacccaggtaatttaaaatattcttcatccaga
gatagaggtggttcttcctcttacggactgcaaccttcaaattcagctgtggtgtctcgg
caaaggcacgatgataccagagtccacgctgacatacagaatgacgaaaagggtggctac
agtgtcaatggaggatctggggaaaatacttatggtcggaagtcgttggggcaagagctg
agggttaacaatgtgaccagccctgagttcaccagtgttcagcatggcagtcgtgcttta
gccaccaaagacatgaggaaatcacaggnn

>gi568815582f:29563729_29764928|GENSCAN_predicted_peptide_2|128_aa
MAKRRRPEKRESPPEPAAADTPLRPGAEEEAEEEEEKEEEEEEEEEAAAEGGTAPTISTD
RQPPPSPPTDSPRHLHRQTAPTISTGRQPPPSPLTDSPHLLHRQTAPTIFTDRQPPPSPP
IDSAHLLH

>gi568815582f:29563729_29764928|GENSCAN_predicted_CDS_2|387_bp
atggccaagcgccgccgcccagagaagcgcgagtcgccgcccgaaccggccgctgccgac
accccgctccggcccggggctgaggaggaagccgaggaggaggaagagaaggaggaggag
gaggaggaggaggaggaggcggcggcggagggcgggacagcccccaccatctccaccgac
agacagcccccaccttctccaccgacagacagcccccgccatcttcaccgacagacagcc
cccaccatctccaccggcagacagcccccaccatctccactgacagacagcccccacctt
ctccaccgacagacagcccccaccatcttcaccgacagacagcccccaccatctccacca
atagacagcgcccaccttctccactga

>gi568815582f:29563729_29764928|GENSCAN_predicted_peptide_3|109_aa
MCPTLDTPLQGVALTLAWALGGLRSPLFCVKAAAGSHASPNCDRETGGGYFCFQGMEELS
AGHFPNTYALGELTETEPGYLLHDAVSPSGPSSESTSLEVEAPEAHSIF

>gi568815582f:29563729_29764928|GENSCAN_predicted_CDS_3|330_bp
atgtgccctaccttggacacccctctacagggggtggctctcaccctggcctgggccctc
gggggtctgcgcagcccactcttctgtgtgaaggcggctgcaggctcccatgcttcaccc
aactgcgacagggaaacaggagggggctacttctgctttcaaggcatggaggagctgtct
gcaggccacttcccgaacacctatgcgcttggggaactgactgagactgagccggggtat
cttctccacgatgcggtgagcccatcaggcccttcttctgagagcacctccctggaggtg
gaagcccctgaggcccacagcatcttctga

>gi568815582f:29563729_29764928|GENSCAN_predicted_peptide_4|221_aa
MAGAGPKRRALAAPVAEEKEEAREKMLASKRADGAAPAGEGEGVTLQRNITLLNGVAIIV
GAIIGSGIFVTPTGVLKEAGSPGLALVMWAACGVFSIVGALCYAELGTTISKSGGDYAYM
LDVYGSLPAFLKLWIELLVIRPSSQYIVALVFATYLLKPLFPSCPVPEEAAKLMACHCVR
EYGARAGGWEVVVPGSLHPCITTPLAPTSLHFCVPGPSRQF

>gi568815582f:29563729_29764928|GENSCAN_predicted_CDS_4|666_bp
atggcgggtgcgggcccgaagcggcgggcgctagcggccccggtggccgaggagaaggaa
gaggcgcgggagaagatgctggcctccaagcgcgcggacggcgcggcgccggcaggcgag
ggcgagggcgtgaccctgcagcggaacatcacgctactcaacggcgtggccatcatcgtg
ggcgccatcatcggctcgggcatcttcgtgacgcccacgggcgtgcttaaggaggcaggc
tcgccggggctggcgctggtgatgtgggccgcgtgcggcgtcttctccatcgtgggcgcg
ctctgctacgcggagctgggcaccaccatctccaaatcgggcggcgactacgcctacatg
ctggacgtctacggctcgctgcccgccttcctcaagctctggatcgagctgctcgtcatc
cggccttcatcgcagtacatcgtggccctggtcttcgccacctacctgctcaagccgctc
ttccccagctgcccggtgcccgaggaggcagccaagctcatggcctgccactgcgtgcgt
gagtacggggcgcgggccgggggttgggaggtcgtggtccctgggtccctgcatccttgc
atcactacgcccctggctcccacatctctacatttttgcgttcctggaccgtcccggcag
ttctag

>gi568815582f:29563729_29764928|GENSCAN_predicted_peptide_5|405_aa
MPRRWAGGGQSEWDRQSPPFTEPTFGLSLQPYSNPLRVNSYNPNVDNASGISGGPLENHY
RLKQFHFHWGAVNEGGSEHTVDGHVYPAELGAHHQMLQRLVDVLLEVKHKLSTRFPASSA
QLSIRFPASSTARKDGGDKSVAFLQDQLRKGFEGEGEIPKKCSLFIQQQTKEFQGRRSQR
KPQMCGRMRLQPVLTMVRAGPDGAGASPSSRFKEPFDLVTKHCSCGILFTTPARSTCPGS
GQGDIAPHLGPYQCRPVTMHSAPSTQAQPQCGPGDPGQTLPEWRPRGFAFDPLTIARSFG
KNCPQRDARAAMRPFDPSALLPTCWDYWTYVGSLTTPPLTESVTWIIQKEPVEVAPSQLS
AFRTLLFSALGEEKKMTVNNYRPLQPLMNWKVWASFQATNEGTRS

>gi568815582f:29563729_29764928|GENSCAN_predicted_CDS_5|1218_bp
atgcccaggcgctgggctggcggggggcagagtgaatgggacagacagagcccacctttc
acggagcccacctttggcttgtcacttcaaccatacagcaaccccttgcgagtgaactca
tataaccctaatgtagacaatgcctcaggaattagtggcgggcccttggaaaaccactac
agactgaagcaatttcacttccactggggagcagtgaacgaggggggctcagagcacaca
gtggacggccacgtgtaccccgcagagctcggggcccatcatcagatgctgcagaggctg
gtggacgtcttgctggaagtaaaacataagctctccacacgcttccctgcatccagcgcc
cagctctccatacgcttccctgcatccagcacagctcgaaaagatggcggggacaagagt
gtcgcctttctccaagatcagctgagaaaaggctttgagggagaaggagaaattccaaag
aaatgtagtttatttattcagcagcaaacaaaagaattccagggcagaaggagtcaacgc
aagcctcagatgtgcggacggatgaggcttcaacctgtgttaacaatggtgcgggctggt
ccagatggagctggggcgagcccttcctcgcggttcaaggagccgtttgatctagtcaca
aagcactgctcctgcggcatcctgttcaccactcccgccaggagcacctgcccaggctca
gggcaaggggacatcgccccacacctcggcccctaccagtgccgacctgtcactatgcac
tcagctcccagcacgcaggcccagccccagtgtggccccggtgaccctgggcagacactc
ccagaatggagacctcgaggcttcgcctttgaccctctcaccatagccagaagttttggc
aaaaactgcccacagagggacgcgcgggcggccatgcgccccttcgacccctccgctctg
ctgcccacctgctgggattactggacctatgtgggctcgctcaccaccccgccgctgacc
gagtcggtcacctggatcatccagaaggagcccgttgaagtggccccaagccaactctct
gcatttcgtactctcctgttttctgcacttggtgaagagaagaagatgacggtgaacaac
tatcgtccacttcaacccctgatgaactggaaggtctgggcgtccttccaggccactaat
gagggcacaagatcctag

>gi568815582f:29563729_29764928|GENSCAN_predicted_peptide_6|400_aa
MATLLLLLGVLVVSPDALGSTTAVQTPTSGEPLVSTSEPLSSKMYTTSITSDPKADSTGD
QTSALPPSTSINEGSPLWTSIGASTGSPLPEPTTYQEVSIKMSSVPQETPHATSHPAVPI
TANSLGSHTVTGGTITTNSPETSSRTSGAPVTTAASSLETSRGTSGPPLTMATVSLETSK
GTSGPPVTMATDSLETSTGTTGPPVTMTTGSLEPSSGASGPQVSSVKLSTMMSPTTSTNA
STVPFRNPDENSRGMLPVAVLVALLAVIVLVALLLLWRRRQKRRTGALVLSRGGKRNGVV
DAWAGPAQVPEEGAVTVTVGGSGGDKGSGFPDGEGSSRRPTLTTFFGRRKSRQGSLAMEE
LKSGSGPSLKGEEEPLVASEDGAVDAPAPDEPEGGDGAAP

>gi568815582f:29563729_29764928|GENSCAN_predicted_CDS_6|1203_bp
atggccacgcttctccttctccttggggtgctggtggtaagcccagacgctctggggagc
acaacagcagtgcagacacccacctccggagagcctttggtctctactagcgagcccctg
agctcaaagatgtacaccacttcaataacaagtgaccctaaggccgacagcactggggac
cagacctcagccctacctccctcaacttccatcaatgagggatcccctctttggacttcc
attggtgccagcactggttcccctttacctgagccaacaacctaccaggaagtttccatc
aagatgtcatcagtgccccaggaaacccctcatgcaaccagtcatcctgctgttcccata
acagcaaactctctaggatcccacaccgtgacaggtggaaccataacaacgaactctcca
gaaacctccagtaggaccagtggagcccctgttaccacggcagctagctctctggagacc
tccagaggcacctctggaccccctcttaccatggcaactgtctctctggagacttccaaa
ggcacctctggaccccctgttaccatggcaactgactctctggagacctccactgggacc
actggaccccctgttaccatgacaactggctctctggagccctccagcggggccagtgga
ccccaggtctctagcgtaaaactatctacaatgatgtctccaacgacctccaccaacgca
agcactgtgcccttccggaacccagatgagaactcacgaggcatgctgccagtggctgtg
cttgtggccctgctggcggtcatagtcctcgtggctctgctcctgctgtggcgccggcgg
cagaagcggcggactggggccctcgtgctgagcagaggcggcaagcgtaacggggtggtg
gacgcctgggctgggccagcccaggtccctgaggagggggccgtgacagtgaccgtggga
gggtccgggggcgacaagggctctgggttccccgatggggaggggtctagccgtcggccc
acgctcaccactttctttggcagacggaagtctcgccagggctccctggcgatggaggag
ctgaagtctgggtcaggccccagcctcaaaggggaggaggagccactggtggccagtgag
gatggggctgtggacgccccagctcctgatgagcccgaagggggagacggggctgcccct
taa

>gi568815582f:29563729_29764928|GENSCAN_predicted_peptide_7|314_aa
MDAEGLALLLPPVTLAALVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFF
DAIFTQLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAA
AVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGG
VEKCQVLGPVLTLVLPAAQQAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDN
FKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSL
KLFAKEVAPVPKIH

>gi568815582f:29563729_29764928|GENSCAN_predicted_CDS_7|945_bp
atggacgctgaaggcctggcgctgctgctgccgcccgtcaccctggcagccctggtggac
agctggctccgagaggactgcccagggctcaactacgcagccttggtcagcggggcaggc
ccctcgcaggcggcgctgtgggccaaatcccctggggtactggcagggcagcctttcttc
gatgccatatttacccaactcaactgccaagtctcctggttcctccccgagggatcgaag
ctggtgccggtggccagagtggccgaggtccggggccctgcccactgcctgctgctgggg
gaacgggtggccctcaacacgctggcccgctgcagtggcattgccagtgctgccgccgct
gcagtggaggccgccaggggggccggctggactgggcacgtggcaggcacgaggaagacc
acgccaggcttccggctggtggagaagtatgggctcctggtgggcggggccgcctcgcac
cgctacgacctgggagggctggtgatggtgaaggataaccatgtggtggccgccggtggc
gtggagaagtgccaggtgctgggcccagtcctcacccttgtcctcccggctgcccagcag
gcggtgcgggcggccagacaggcggctgacttcactctgaaggtggaagtggaatgcagc
agcctgcaggaggccgtgcaggcagctgaggctggtgccgaccttgtcctgctggacaac
ttcaagccagaggagctgcaccccacggccaccgtgctgaaggcccagttcccgagtgtg
gctgtggaagccagtgggggcatcaccctggacaacctcccccagttctgcgggccgcac
atagacgtcatctccatggggatgctgacccaggcggccccagcccttgatttctccctc
aagctgtttgccaaagaggtggctccagtgcccaaaatccactag

>gi568815582f:29563729_29764928|GENSCAN_predicted_peptide_8|332_aa
MKLRTLTAACPEFVPSDVRTCSEFLPSGGFVVSLASGVKLQTFTMLQLIKAVQTQDKQQQ
DLLERSKEQSFLCGRMPLTPEPPSGRVEGPPAWEAAPWPSLPCGPCIPIMLVLATLAALF
ILTTAVLAERLFRRALRPDPSHRAPTLVWRPGGELWIEPMGTARERSEDWYGSAVPLLTD
RAPEPPTQQLGPPDRTGGPSPEHLLGAPALGGEAPRHRPVFTEATNTKENGSCGAEQPRC
GDDSWQEMTGIQFPRATNPVLLGHSPTKFTENINNDPYYPFYRFAQGEAKSPSGIHPREI
ENVCPHQNQYMNFHSSIIHNSQNVETTHMSIN

>gi568815582f:29563729_29764928|GENSCAN_predicted_CDS_8|999_bp
atgaagctgcggaccctcacggcggcatgtccggagtttgttccttctgatgttcggacg
tgttccgagtttcttccttctggtgggttcgtggtctcgctggcctctggcgtgaagctg
cagaccttcacgatgttacagctcataaaggcagtgcagacccaggataagcagcagcaa
gatttattggaaagatcaaaagaacaaagcttcctatgtggaaggatgccgttgactcca
gagccgccctctgggcgcgtggaggggccccccgcatgggaagcagccccatggccctca
ctgccctgtgggccctgcatccccatcatgctggtcctggccaccctggctgcgctcttc
atcctcaccaccgctgtgttggctgaacgcctgttccgccgtgctctccgcccagacccc
agccaccgtgcacccaccctggtgtggcgcccaggaggagagctgtggattgagcccatg
ggcaccgcccgagagcgctctgaggactggtatggctctgcggtccccctgctgacagat
cgggcccctgagcctcccacccagcaacttgggcccccagaccgtactggaggtcccagc
ccggagcaccttctgggggccccagccctgggaggggaggccccccgccacaggcctgtg
tttaccgaagccaccaataccaaagagaacgggtcctgcggtgctgaacagcctcggtgt
ggcgatgacagctggcaggagatgacaggaatccagtttcccagagccacaaatcctgtt
ctccttggccactcacccactaaatttacagagaatataaacaatgatccttattatccc
ttttaccggtttgcacagggagaagccaaaagcccatctggtatacacccaagagaaatt
gaaaacgtgtgcccacaccaaaaccagtacatgaattttcatagcagcataattcataat
agccaaaacgtagaaacaacccacatgtccatcaactga