GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:38:52

Sequence gi568815596f:69987744_70188811 : 201068 bp : 45.58% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  14952  15128  177  2  0   93   48   110 0.647   5.19
 1.02 PlyA +  17877  17882    6                               1.05

 2.00 Prom +  18495  18534   40                              -1.16
 2.01 Init +  60744  60888  145  2  1   77   95    98 0.616   9.68
 2.02 Intr +  90768  90928  161  1  2  -27   46   176 0.019   1.61
 2.03 Term +  97781  97843   63  1  0   43   43    76 0.020  -3.51
 2.04 PlyA +  98005  98010    6                               1.05

 3.00 Prom +  98271  98310   40                              -3.56
 3.01 Sngl + 100001 101071 1071  1  0   92   42  1235 0.927 116.44
 3.02 PlyA + 101356 101361    6                               1.05

 4.00 Prom + 104516 104555   40                              -4.16
 4.01 Init + 114832 115070  239  0  2   72   76   105 0.179   5.29
 4.02 Intr + 124625 124703   79  2  1   72   46    52 0.015  -1.05
 4.03 Term + 154914 155072  159  2  0   55   53   149 0.635   6.04
 4.04 PlyA + 156591 156596    6                               1.05

 5.00 Prom + 158036 158075   40                              -6.26
 5.01 Sngl + 160829 161116  288  1  0   97   48   153 0.678   6.90
 5.02 PlyA + 161688 161693    6                               1.05

 6.09 PlyA - 162170 162165    6                               1.05
 6.08 Term - 162821 162613  209  0  2   91   42   249 0.951  18.10
 6.07 Intr - 173044 172882  163  1  1   84  111   127 0.963  14.15
 6.06 Intr - 177449 177349  101  0  2   41   78    17 0.819  -4.17
 6.05 Intr - 177892 177785  108  2  0  109   92    27 0.943   5.46
 6.04 Intr - 181918 181814  105  2  0   60  115    56 0.940   5.69
 6.03 Intr - 188034 187930  105  1  0   70  110    27 0.892   3.29
 6.02 Intr - 191899 191789  111  2  0  102   99    13 0.916   4.15
 6.01 Init - 194242 193420  823  1  1   59   78   641 0.998  55.08

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:69987744_70188811|GENSCAN_predicted_peptide_1|58_aa
CKVGFDPREHFPSIYNFTSLLLEASSEKVPPFLNWGADQNSPMSLVFKVSFTSSPSSF

>gi568815596f:69987744_70188811|GENSCAN_predicted_CDS_1|177_bp
tgcaaagttggctttgatccaagggagcacttcccctccatctacaacttcacatctttg
ctgttggaggcctcttctgagaaagtacctcctttcttaaactggggggctgatcagaat
agccctatgtccctggtgtttaaagtcagcttcaccagctccccctcgtccttctga

>gi568815596f:69987744_70188811|GENSCAN_predicted_peptide_2|122_aa
MAMVKVETQQQQQQEVWNLCTASTVGAYRDLKVFDFSGPQFPLSENEDVTVEQKPEGDKG
EGHTDIWKNDVPGRKSNYKGPKAWHAGATAKETIVATAQGEVKNLENVLTSKEIWRSIPD
IV

>gi568815596f:69987744_70188811|GENSCAN_predicted_CDS_2|369_bp
atggccatggtaaaggtggagacccaacaacagcaacagcaggaggtatggaatctatgc
acagccagcacagtaggggcctacagagatctcaaagtatttgacttctctgggcctcag
tttcctttatctgaaaatgaagatgtgacagttgagcagaaacctgaaggagataaggga
gaaggccatactgacatctggaaaaatgatgttcctggcagaaaaagcaactacaaaggc
cccaaggcctggcatgctggagcaactgcaaaggagaccattgtggctacagcacaaggg
gaagtgaaaaacctggaaaatgtgctcaccagtaaggaaatctggaggtccatccccgac
attgtgtga

>gi568815596f:69987744_70188811|GENSCAN_predicted_peptide_3|356_aa
MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT
LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI
KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT
IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ
VARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGA
NINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEKGMGCS

>gi568815596f:69987744_70188811|GENSCAN_predicted_CDS_3|1071_bp
atggatgccggtgtgactgaaagtggactaaatgtgactctcaccattcggcttcttatg
cacggaaaggaagtaggaagcatcattgggaagaaaggggagtcggttaagaggatccgc
gaggagagtggcgcgcggatcaacatctcggaggggaattgtccggagagaatcatcact
ctgaccggccccaccaatgccatctttaaggctttcgctatgatcatcgacaagctggag
gaagatatcaacagctccatgaccaacagtaccgcggccagcaggcccccggtcaccctg
aggctggtggtgccggccacccagtgcggctccctgattgggaaaggcgggtgtaagatc
aaagagatccgcgagagtacgggggcgcaggtccaggtggcgggggatatgctgcccaac
tccaccgagcgggccatcaccatcgctggcgtgccgcagtctgtcaccgagtgtgtcaag
cagatttgcctggtcatgctggagacgctctcccagtctccgcaagggagagtcatgacc
attccgtaccagcccatgccggccagctccccagtcatctgcgcgggcggccaagatcgg
tgcagcgacgctgcgggctacccccatgccacccatgacctggagggaccacctctagat
gcctactcgattcaaggacaacacaccatttctccgctcgatctggccaagctgaaccag
gtggcaagacaacagtctcactttgccatgatgcacggcgggaccggattcgccggaatt
gactccagctctccagaggtgaaaggctattgggcaagtttggatgcatctactcaaacc
acccatgaactcaccattccaaataacttaattggctgcataatcgggcgccaaggcgcc
aacattaatgagatccgccagatgtccggggcccagatcaaaattgccaacccagtggaa
ggctcctctggtaggcaggttactatcactggctctgctgccagtattagtctggcccag
tatctaatcaatgccaggctttcctctgagaagggcatggggtgcagctag

>gi568815596f:69987744_70188811|GENSCAN_predicted_peptide_4|158_aa
MVNPMLYLSRHTVKPRALSTFLFGSLRGAAPVAVEPGAEVRSLLSPGLLPHLLPALGFKN
KTVLKKRCKDCYLVKRRGQCLGNQILEKLRSLYLEGTKIALQSLLLRATYLAPPLRATQG
TPVTSPPSGALIPALSRKDAKVVTCPVRQGGCAGGIGN

>gi568815596f:69987744_70188811|GENSCAN_predicted_CDS_4|477_bp
atggtgaaccctatgctatatctcagtcgtcacacagtgaagcctcgagccctctccaca
tttctatttggatcccttcgaggtgcagcccccgtggctgtggaacccggggcagaagtg
cgctcacttctctcacccggcctcctgccccacctgctgcccgcgctggggttcaaaaac
aagactgtccttaagaagcgctgcaaggactgttacctggtgaagaggcggggtcagtgc
ctggggaatcagatcttggagaaacttcgatctctttatctggaaggcacaaagatagca
ttgcaaagcctgctgctgcgcgccacgtacctggccccgcccctgcgagccacgcaggga
accccggtgacgtcaccaccctccggcgctctcattcccgcgctctccagaaaagacgcg
aaggtggtgacgtgtcccgtgcgccagggcggctgcgcaggaggcattggcaactga

>gi568815596f:69987744_70188811|GENSCAN_predicted_peptide_5|95_aa
MPEPSTHSMGSCAARASLTSTTPCSTVPSPIDHPRAEECERMAQDWQAAPPAAPVWDPLG
EASWAPESGGECGVFISSSGIVNTPISTLCLAQGL

>gi568815596f:69987744_70188811|GENSCAN_predicted_CDS_5|288_bp
atgcctgagccttccacccactccatgggctcctgtgcggcccgagcctccctgacgagc
accaccccctgctccacagtgcccagtcccatcgaccacccaagggctgaggaatgtgag
cgcatggcgcaggactggcaggcagctccacctgcagccccagtgtgggatccactgggt
gaagccagctgggctcctgagtctgggggggaatgtggagtctttatatctagctcaggg
attgtaaatacaccaatcagcaccctgtgtttagctcaaggtttgtga

>gi568815596f:69987744_70188811|GENSCAN_predicted_peptide_6|574_aa
MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPS
VEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSC
LKAATQGVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPL
VQRITKNILVVKCKASQKHSLGYLHTSFVQKVSGKSLPERRFFCSCQTLKSHKSNASKDE
TAQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTAS
KSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLS
FQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFV
RKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVES
IAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFE
YGHHRNGHVAEYQDQRPPLDQPLELAPLTTITFP

>gi568815596f:69987744_70188811|GENSCAN_predicted_CDS_6|1725_bp
atggaaccaaattctctgaggactaaagtcccagctttcttatctgatttggggaaggcc
acattgaggggaatcagaaagtgtccccgatgtggcacatacaatggaacccggggactg
agctgtaagaacaagacatgtggaaccatattccgctacggtgcacgcaagcagcctagt
gttgaagctgtcaaaatcattacaggctctgatcttcaggtctactcagtgcggcaaaga
gaccggggccctgattaccgatgctttgtggagctcggggtttcagagacaacaatccag
acagtggatgggacgatcatcactcagctgagctctggacggtgttatgtcccctcatgc
ctgaaagctgccactcaaggcgttgtggaaaaccagtgccagcacatcaagctggcggtg
aactgccaggcagaggccacccctctgaccctgaagagctcggtcctgaatgcaatgcag
gcctccccggaaaccaaacagaccatctggcagttggccacggaacccacaggtcctctg
gtgcagagaattactaaaaacatcttggtggtgaaatgcaaggcaagccagaagcacagt
ttggggtatttgcatacatcttttgtgcagaaagtcagtggcaaaagcttgcctgagcgc
cgcttcttctgctcctgtcagactctgaaatcgcacaagtcaaatgcctccaaggatgag
acagcccagagatgcattcatttctttgcttgcatctgtgcctttgccagtgatgagaca
ctggctcaggaattctcagacttcctaaattttgattccagcggtcttaaagagattatt
gtaccccagttaggttgccattcagaatcaacagtatctgcttgtgagtctactgcctct
aagtcaaagaagaggagaaaggatgaagtatctggtgcacagatgaacagttcactactg
cctcaagatgcagtgagcagtaatctaaggaaaagtggcctgaaaaagcctgtggttgct
tcctcgttaaaaaggcaggcctgtggtcagctgttagatgaggcacaagtgactttatcc
ttccaagactggctggccagtgtcacagaacgcatccatcaaaccatgcactatcagttt
gatggcaaaccagaaccattggtgttccacattcctcagtcattttttgatgccctgcaa
caaagaatatctataggaagtgcaaaaaaacggctccccaactccaccacagcttttgtt
cggaaagatgccttgccactgggaaccttttccaagtatacttggcatatcactaatatc
ctgcaagttaaacaaatcttagataccccagagatgcccttggaaatcacccgtagcttt
atccagaaccgagatgggacttatgagctatttaaatgccctaaagtggaagtagaaagc
atagcagaaacctacggtcgtatagaaaaacaaccagtgctgcgacccttggaactaaaa
acttttctcaaagttggcaacacttccccagatcaaaaggagccaacacctttcatcatc
gagtggatcccagatatccttccccaatctaagattggcgagctgcggatcaagtttgag
tatggccaccaccggaatgggcatgtggcggagtaccaagaccagcggccccccttggac
cagcccttggaactggcccctctgaccactattactttcccttaa