GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:38:09

Sequence gi568815596r:206076183_206277247 : 201065 bp : 43.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   8481   8606  126  2  0   84   74    10 0.376   0.08
 1.02 Term +   9212   9625  414  1  0   82   47   133 0.600   3.86
 1.03 PlyA +  10649  10654    6                               1.05

 2.16 PlyA -  10885  10880    6                               1.05
 2.15 Term -  40097  39988  110  0  2   82   36   100 0.723   2.87
 2.14 Intr -  50429  50357   73  2  1   89   91    58 0.910   5.18
 2.13 Intr -  50662  50528  135  1  0   29   87   119 0.977   6.66
 2.12 Intr -  51790  51678  113  2  2   86   64    54 0.471   2.90
 2.11 Intr -  54060  53906  155  2  2   72  115    20 0.957   2.82
 2.10 Intr -  56923  56763  161  1  2   84   58    51 0.911   0.49
 2.09 Intr -  62432  62303  130  1  1   74   47    87 0.949   3.90
 2.08 Intr -  65887  65759  129  0  0   51   73    57 0.550   0.31
 2.07 Intr -  66649  66504  146  1  2   84   72   105 0.618   7.58
 2.06 Intr -  67950  67836  115  2  1   77   53    45 0.895   0.35
 2.05 Intr -  68844  68710  135  2  0   50   76   121 0.986   6.78
 2.04 Intr -  70906  70721  186  0  0  109   65    85 0.983   7.10
 2.03 Intr -  71479  71349  131  1  2   46   93    99 0.985   5.69
 2.02 Intr -  73743  73636  108  0  0  108   75    67 0.966   7.88
 2.01 Init -  74037  73972   66  0  0   69   67    30 0.904   0.07
 2.00 Prom -  78388  78349   40                              -6.66

 3.00 Prom +  81442  81481   40                              -6.66
 3.01 Init +  82664  82716   53  1  2   53   49    73 0.715   0.53
 3.02 Intr +  83731  83877  147  1  0  106   72   231 0.884  22.65
 3.03 Intr +  84406  84528  123  1  0   89   98    84 0.998   9.20
 3.04 Intr +  85164  85290  127  0  1  -13   64   195 0.952   7.68
 3.05 Intr +  85856  85922   67  1  1   88   56    69 0.999   2.18
 3.06 Intr +  86307  86432  126  1  0   78   84    53 0.907   4.55
 3.07 Term +  86547  86701  155  1  2   66   38   187 0.894   9.58
 3.08 PlyA +  86727  86732    6                               1.05

 4.02 PlyA -  88165  88160    6                               1.05
 4.01 Sngl - 101065  99998 1068  1  0   59   38   494 0.917  38.65
 4.00 Prom - 104760 104721   40                              -5.06

 5.00 Prom + 108013 108052   40                              -4.66
 5.01 Init + 111177 111215   39  2  0   81   91    25 0.163   2.32
 5.02 Intr + 164261 164406  146  1  2  119   92    78 0.699  10.38
 5.03 Term + 177327 177411   85  0  1   48   36   124 0.196   0.33
 5.04 PlyA + 178459 178464    6                               1.05

 6.02 PlyA - 180241 180236    6                               1.05
 6.01 Sngl - 199016 198444  573  2  0   77   48   286 0.909  17.70

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:206076183_206277247|GENSCAN_predicted_peptide_1|179_aa
SPRCSLHLPLRRSCPEGGFWTQRNRDERGWVLKLKITPPVGGALTPLSRQPGPAAPRESL
RAGAGFGPAAPPSHPETPGDSRGRAEARGAGAGRGCRGAYRPEAYRRPPLPPHTPTWPAQ
AAPLAPLRLRLDPCPPAVAARGRPGGPQAPGLHHPGAGPTHPFILRPGPGVGRRIPGLT

>gi568815596r:206076183_206277247|GENSCAN_predicted_CDS_1|540_bp
tctcctcgctgctccctacatcttcctctccgccggagctgtccagaagggggattttgg
acccaaaggaatcgggatgaaagggggtgggtactcaagctgaaaataacacccccagtt
ggtggggccctgacgcccctgtcccggcagcccgggcctgccgccccgcgggaaagcctc
cgggccggcgcgggattcggcccagcagcgccgccgtcccacccggagaccccgggggac
tcgagggggcgcgcggaggcccggggtgcgggggcagggcgcggctgccgtggggcctac
cggcccgaggcctaccggcgcccccccctcccgccgcacacccccacctggcccgcgcag
gccgctccgctcgccccactccggctccggctggacccctgcccgcccgccgtcgccgcc
cgcgggcgccccggaggccctcaggcccccggcctccaccacccgggcgccggccccact
caccctttcattctccgcccggggcctggcgtgggccggcgaatccccggcctcacgtaa

>gi568815596r:206076183_206277247|GENSCAN_predicted_peptide_2|630_aa
MDVGSQVFSTVEGYFIQFLPHKACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKDQ
SMMFGNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGN
DMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTARPWETRKTESIDVMDAVGSNIV
VSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTEPMVRNEKGLLTYTSWEDA
LSRVAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNRVDSDTLCTEEVFPTAGAGTDLR
SNYLLNTTIAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPVDLTYTY
DHLGDSPKILQDIASGSHPFSQVLKEAKKPMVVLGSSALQRNDGAAILAAVSSIAQKIRM
TSGVTGDWKVMNILHRIASQVAALDLGYKPGVEAIRKNPPKVLFLLGADGGCITRQDLPK
DCFIIYQGHHGDVGAPIADVILPGAAYTEKSATYVNTEGRAQQTKIAGMTLPYDTLDQVR
NRLEEVSPNLVRYDDIEGANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTGEVTEI
NEALAENPGLVNKSRYEDGWLIKMTLSNPS

>gi568815596r:206076183_206277247|GENSCAN_predicted_CDS_2|1893_bp
atggatgtgggaagtcaagtcttcagcacagtggaaggatactttatccagtttcttcca
cataaggcttgtgagaaggttggcatgcagatccctcgattctgttatcatgaaaggttg
tctgttgctggaaactgcaggatgtgccttgttgaaattgagaaagcccctaaggaccag
tccatgatgtttggaaatgataggagccgatttttagaggggaagcgtgctgtggaagac
aagaacattgggccattggtaaagaccatcatgacaagatgtatacagtgtactcgctgc
atcaggtttgcaagtgagattgcaggagtagatgatttgggaacaacaggcagaggaaat
gatatgcaagttggcacatacattgaaaagatgttcatgtctgaactgtctgggaatatc
attgatatctgccctgtaggtgccctaacctctaagccctatgcctttactgcccggcct
tgggaaacaagaaagacagaatccattgatgtaatggatgcggttggaagtaatattgtg
gttagcacaagaactggagaagtgatgaggattttgccacgtatgcatgaggacatcaat
gaagagtggatctctgataaaaccagatttgcctatgatgggctaaaacgtcaaagactt
accgagccaatggtcagaaatgaaaaagggcttttaacctatacttcttgggaggatgcg
ctctctcgcgtagctggaatgttgcagagttttcaaggcaaagatgtggcagcaattgca
ggtggcttggtggatgctgaagccctggtagctctcaaagatttgcttaatagagtggac
tctgacaccttatgcactgaagaggtcttccccactgcaggagctggcacagatttgcgt
tccaattatcttcttaatactacaattgctggtgtggaagaggcagatgttgttcttctg
gttggtacaaacccacgttttgaggcaccactgtttaatgctagaattcgaaagagctgg
ctgcataatgacttaaaagtggcccttataggcagtccagtggacctcacttacacatat
gaccacctgggagactcccccaaaattcttcaagacattgcttcgggaagccatccattt
agccaggtcctaaaggaagctaaaaaaccaatggtggttttaggcagttctgcactccaa
agaaatgatggagcagcaattcttgcagctgtttctagcattgcacaaaagattcggatg
actagtggtgttactggtgattggaaagttatgaatatccttcataggattgcaagtcaa
gtagctgctttggaccttggctataagcctggggtggaagcaattcggaagaaccctccc
aaggtgctgtttctcctgggagcagatggaggttgtatcacacgacaggatttgccaaag
gattgtttcattatttatcaaggacatcatggtgatgttggggctcccatagctgatgtt
attctcccaggagctgcttacacagagaagtctgctacatatgtcaacactgagggtaga
gctcagcagactaagattgctggaatgactcttccatatgatactctggatcaagtaagg
aacagattggaagaagtctctcctaatcttgttcgatatgatgatattgaaggggctaat
tacttccagcaagcaaatgagctctcaaagctagtgaaccagcagcttcttgctgaccca
cttgttccacctcagctaactataaaagacttctacatgacaggagaagtaaccgaaatt
aatgaagctcttgcagaaaatccaggacttgtaaacaaatctcgttatgaagatggttgg
ctgatcaagatgacactgagtaacccttcataa

>gi568815596r:206076183_206277247|GENSCAN_predicted_peptide_3|265_aa
MLSNVVNGPNKQGQQTEAVGRPQFARSLSAAPQLSDTADTMGFGDLKSPAGLQVLNDYLA
DKSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIKSYEKEKASLPGVKKALGKYG
PADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKS
SILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGT
DMLEEQITAFEDYVQSMDVAAFNKI

>gi568815596r:206076183_206277247|GENSCAN_predicted_CDS_3|798_bp
atgctgtccaacgtggtcaatggaccaaacaaacaaggacaacaaacagaagccgtgggg
cgcccacaatttgcgcgctctctttctgctgctccccagctctcggatacagccgacacc
atgggtttcggagacctgaaaagccctgccggcctccaggtgctcaacgattacctggcg
gacaagagctacatcgaggggtatgtgccatcacaagcagatgtggcagtatttgaagcc
gtgtccagcccaccgcctgccgacttgtgtcatgccctacgttggtataatcacatcaag
tcttacgaaaaggaaaaggccagcctgccaggagtgaagaaagctttgggcaaatatggt
cctgccgatgtggaagacactacaggaagtggagctacagatagtaaagatgatgatgac
attgacctctttggatctgatgatgaggaggaaagtgaagaagcaaagaggctaagggaa
gaacgtcttgcacaatatgaatcaaagaaagccaaaaaacctgcacttgttgccaagtct
tccatcttactagatgtgaaaccttgggatgatgagacagatatggcgaaattagaggag
tgcgtcagaagcattcaagcagacggcttagtctggggctcatctaaactagttccagtg
ggatacggaattaagaaacttcaaatacagtgtgtagttgaagatgataaagttggaaca
gatatgctggaggagcagatcactgcttttgaggactatgtgcagtccatggatgtggct
gctttcaacaagatctaa

>gi568815596r:206076183_206277247|GENSCAN_predicted_peptide_4|355_aa
MEDLEETLFEEFENYSYDLDYYSLESDLEEKVQLGVVHWVSLVLYCLAFVLGIPGNAIVI
WFTGFKWKKTVTTLWFLNLAIADFIFLLFLPLYISYVAMNFHWPFGIWLCKANSFTAQLN
MFASVFFLTVISLDHYIHLIHPVLSHRHRTLKNSLIVIIFIWLLASLIGGPALYFRDTVE
FNNHTLCYNNFQKHDPDLTLIRHHVLTWVKFIIGYLFPLLTMSICYLCLIFKVKKRSILI
SSRHFWTILVVVVAFVVCWTPYHLFSIWELTIHHNSYSHHVMQAGIPLSTGLAFLNSCLN
PILYVLISKKFQARFRSSVAEILKYTLWEVSCSGTVSEQLRNSETKNLCLLETAQ

>gi568815596r:206076183_206277247|GENSCAN_predicted_CDS_4|1068_bp
atggaagatttggaggaaacattatttgaagaatttgaaaactattcctatgacctagac
tattactctctggagtctgatttggaggagaaagtccagctgggagttgttcactgggtc
tccctggtgttatattgtttggcttttgttctgggaattccaggaaatgccatcgtcatt
tggttcacggggttcaagtggaagaagacagtcaccactctgtggttcctcaatctagcc
attgcggatttcatttttcttctctttctgcccctgtacatctcctatgtggccatgaat
ttccactggccctttggcatctggctgtgcaaagccaattccttcactgcccagttgaac
atgtttgccagtgtttttttcctgacagtgatcagcctggaccactatatccacttgatc
catcctgtcttatctcatcggcatcgaaccctcaagaactctctgattgtcattatattc
atctggcttttggcttctctaattggcggtcctgccctgtacttccgggacactgtggag
ttcaataatcatactctttgctataacaattttcagaagcatgatcctgacctcactttg
atcaggcaccatgttctgacttgggtgaaatttatcattggctatctcttccctttgcta
acaatgagtatttgctacttgtgtctcatcttcaaggtgaagaagcgaagcatcctgatc
tccagtaggcatttctggacaattctggttgtggttgtggcctttgtggtttgctggact
ccttatcacctgtttagcatttgggagctcaccattcaccacaatagctattcccaccat
gtgatgcaggctggaatccccctctccactggtttggcattcctcaatagttgcttgaac
cccatcctttatgtcctaattagtaagaagttccaagctcgcttccggtcctcagttgct
gagatactcaagtacacactgtgggaagtcagctgttctggcacagtgagtgaacagctc
aggaactcagaaaccaagaatctgtgtctcctggaaacagctcaataa

>gi568815596r:206076183_206277247|GENSCAN_predicted_peptide_5|89_aa
MVERNFGAEHSLQDQFSLRRLFIDSCKQISGGNCSKAFQMCTGMDESEQKWTDVAQMEGS
AITLLHVIPPAALYTTWSRLRYRMQHSPR

>gi568815596r:206076183_206277247|GENSCAN_predicted_CDS_5|270_bp
atggttgagcgcaactttggggcagagcacagcttacaggatcaattttctctcaggagg
ctcttcattgactcatgcaaacagatttctggcgggaactgctccaaggccttccagatg
tgcacaggcatggatgaatcagagcagaagtggacagatgtagctcaaatggagggttct
gctatcactctattgcatgtaataccgccggcggcactctacacgacttggagccgcctg
cgctaccgtatgcagcactctccacggtag

>gi568815596r:206076183_206277247|GENSCAN_predicted_peptide_6|190_aa
MQPAPHLLPSPRHLDPGPEPPTPLTQQGQKGTRGGGKPRTCEAAAGAQRAVLASLGKKAP
RAPGEQAPPAGVAPAAPRPRRGTHLRGGCPDSFRAAVETEDRAGRSPFLFRFRGGARIPD
RPSATAPLPAEPEIGDFGPCGPEARSGAGARLSGRGPRVATPLTQASKATWRCNPDGGLT
SGKVRKPDPF

>gi568815596r:206076183_206277247|GENSCAN_predicted_CDS_6|573_bp
atgcagcctgcgccccacctccttccctcgccccgccacctcgatcccggcccggagccg
ccgacacctctcacgcagcaggggcagaaagggacgcggggtggggggaagccgaggacc
tgcgaggcggccgcgggagcccagcgagcggtcctggcgtccctcgggaagaaggcgccc
cgggcgcccggcgagcaggccccgcccgcgggcgtcgccccggccgcgccccgcccccgc
cgcggcactcacctccgcggaggctgcccggattccttccgggccgcggtggagaccgag
gaccgagccgggcgctctcccttcttattccggttccgcggcggcgcccgaatcccagac
cgtccgagcgccacggccccgctgcccgcggagccagaaataggcgacttcggcccctgc
ggtccggaggcgagaagcggcgcgggagcgcgtctctcaggacgcgggccccgagtcgcg
actccactcacgcaggcatccaaggcaacgtggcgttgcaaccctgatggaggtttgacg
tcagggaaggtgcgaaaaccagaccccttctga