Result of FASTA (omim) for pF1KB9835
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9835, 350 aa
  1>>>pF1KB9835 350 - 350 aa - 350 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.6487+/-0.000527; mu= 20.6828+/- 0.033
 mean_var=113.2995+/-29.521, 0's: 0 Z-trim(109.1): 639  B-trim: 1022 in 1/48
 Lambda= 0.120493
 statistics sampled from 16526 (17267) to 16526 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.544), E-opt: 0.2 (0.202), width:  16
 Scan time:  7.030

The best scores are:                                      opt bits E(85289)
NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350) 2328 416.4 4.7e-116
XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 1767 318.9 1.1e-86
XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 1767 318.9 1.1e-86
NP_001548 (OMIM: 146928) C-X-C chemokine receptor  ( 360) 1767 318.9 1.1e-86
XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 1767 318.9 1.1e-86
XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 1767 318.9 1.1e-86
NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360) 1767 318.9 1.1e-86
NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374)  877 164.2 4.1e-40
NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374)  877 164.2 4.1e-40
NP_001495 (OMIM: 300574) C-X-C chemokine receptor  ( 368)  791 149.2 1.3e-35
XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378)  791 149.3 1.3e-35
NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415)  791 149.3 1.4e-35
XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415)  791 149.3 1.4e-35
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360)  775 146.4 8.8e-35
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360)  775 146.4 8.8e-35
NP_001707 (OMIM: 601613) C-X-C chemokine receptor  ( 372)  754 142.8 1.1e-33
NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356)  751 142.3 1.6e-33
NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352)  745 141.2 3.2e-33
NP_116743 (OMIM: 601613) C-X-C chemokine receptor  ( 327)  743 140.8   4e-33
NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357)  737 139.8 8.6e-33
NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357)  737 139.8 8.6e-33
XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369)  737 139.9 8.7e-33
NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369)  737 139.9 8.7e-33
NP_005192 (OMIM: 601834) C-C chemokine receptor ty ( 355)  717 136.4 9.5e-32
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372)  715 136.0 1.2e-31
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372)  715 136.0 1.2e-31
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372)  715 136.0 1.2e-31
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378)  715 136.1 1.3e-31
NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315)  710 135.1 2.1e-31
XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360)  697 132.9 1.1e-30
NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360)  697 132.9 1.1e-30
NP_001287 (OMIM: 602648) atypical chemokine recept ( 384)  696 132.8 1.2e-30
NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374)  695 132.6 1.4e-30
NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352)  668 127.8 3.5e-29
NP_000570 (OMIM: 601373,609532,610379,612522) C-C  ( 352)  668 127.8 3.5e-29
NP_057641 (OMIM: 606065) atypical chemokine recept ( 350)  656 125.7 1.5e-28
NP_848540 (OMIM: 606065) atypical chemokine recept ( 350)  656 125.7 1.5e-28
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355)  652 125.1 2.4e-28
XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355)  647 124.2 4.4e-28
NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355)  647 124.2 4.4e-28
NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355)  647 124.2 4.4e-28
XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355)  647 124.2 4.4e-28
NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373)  647 124.2 4.5e-28
NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376)  647 124.2 4.5e-28
XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410)  647 124.3 4.7e-28
XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410)  647 124.3 4.7e-28
XP_016860005 (OMIM: 610376) PREDICTED: atypical ch ( 362)  612 118.1   3e-26
NP_064707 (OMIM: 610376) atypical chemokine recept ( 362)  612 118.1   3e-26
XP_005246155 (OMIM: 610376) PREDICTED: atypical ch ( 362)  612 118.1   3e-26
XP_005246154 (OMIM: 610376) PREDICTED: atypical ch ( 362)  612 118.1   3e-26


>>NP_000625 (OMIM: 146929,609423) C-X-C chemokine recept  (350 aa)
 initn: 2328 init1: 2328 opt: 2328  Z-score: 2204.5  bits: 416.4 E(85289): 4.7e-116
Smith-Waterman score: 2328; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)

               10        20        30        40        50        60
pF1KB9 MSNITDPQMWDFDDLNFTGMPPADEDYSPCMLETETLNKYVVIIAYALVFLLSLLGNSLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MSNITDPQMWDFDDLNFTGMPPADEDYSPCMLETETLNKYVVIIAYALVFLLSLLGNSLV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 MLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 FYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 NNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 MRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCL
              250       260       270       280       290       300

              310       320       330       340       350
pF1KB9 NPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVNVSSNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVNVSSNL
              310       320       330       340       350

>>XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemokine  (360 aa)
 initn: 1757 init1: 1757 opt: 1767  Z-score: 1677.4  bits: 318.9 E(85289): 1.1e-86
Smith-Waterman score: 1767; 78.0% identity (90.5% similar) in 346 aa overlap (10-350:15-360)

                    10            20        30        40        50 
pF1KB9      MSNITDPQMWDFDDL-NFT---GMPPADEDYSPCMLETETLNKYVVIIAYALVFL
                     :  .:: :..    .::   : .::  :.  .::: :.: ::::::
XP_016 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
               10        20        30        40        50        60

              60        70        80        90       100       110 
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
               70        80        90       100       110       120

             120       130       140       150       160       170 
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPF
       :::::::::::::::::::::::::::::::::::::::.::::.::. ::::. :.:: 
XP_016 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
              130       140       150       160       170       180

             180       190       200       210       220       230 
pF1KB9 FLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFK
       .:::.. . .: ::.::: .::.::.:::.:::::..:::::::..::::::::::::::
XP_016 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
              190       200       210       220       230       240

             240       250       260       270       280       290 
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATE
       ::::::::::::::::::::::::::::::::::::::::::::.:::::.: :::::::
XP_016 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
              250       260       270       280       290       300

             300       310       320       330       340        350
pF1KB9 ILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYT-SSSVNVSSNL
       :::.:::::::.:::::::.::::.:::::.:::.::. : .    :.. ::: ..:..:
XP_016 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
              310       320       330       340       350       360

>>XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemokine  (360 aa)
 initn: 1757 init1: 1757 opt: 1767  Z-score: 1677.4  bits: 318.9 E(85289): 1.1e-86
Smith-Waterman score: 1767; 78.0% identity (90.5% similar) in 346 aa overlap (10-350:15-360)

                    10            20        30        40        50 
pF1KB9      MSNITDPQMWDFDDL-NFT---GMPPADEDYSPCMLETETLNKYVVIIAYALVFL
                     :  .:: :..    .::   : .::  :.  .::: :.: ::::::
XP_005 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
               10        20        30        40        50        60

              60        70        80        90       100       110 
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
               70        80        90       100       110       120

             120       130       140       150       160       170 
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPF
       :::::::::::::::::::::::::::::::::::::::.::::.::. ::::. :.:: 
XP_005 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
              130       140       150       160       170       180

             180       190       200       210       220       230 
pF1KB9 FLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFK
       .:::.. . .: ::.::: .::.::.:::.:::::..:::::::..::::::::::::::
XP_005 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
              190       200       210       220       230       240

             240       250       260       270       280       290 
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATE
       ::::::::::::::::::::::::::::::::::::::::::::.:::::.: :::::::
XP_005 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
              250       260       270       280       290       300

             300       310       320       330       340        350
pF1KB9 ILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYT-SSSVNVSSNL
       :::.:::::::.:::::::.::::.:::::.:::.::. : .    :.. ::: ..:..:
XP_005 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
              310       320       330       340       350       360

>>NP_001548 (OMIM: 146928) C-X-C chemokine receptor type  (360 aa)
 initn: 1757 init1: 1757 opt: 1767  Z-score: 1677.4  bits: 318.9 E(85289): 1.1e-86
Smith-Waterman score: 1767; 78.0% identity (90.5% similar) in 346 aa overlap (10-350:15-360)

                    10            20        30        40        50 
pF1KB9      MSNITDPQMWDFDDL-NFT---GMPPADEDYSPCMLETETLNKYVVIIAYALVFL
                     :  .:: :..    .::   : .::  :.  .::: :.: ::::::
NP_001 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
               10        20        30        40        50        60

              60        70        80        90       100       110 
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
               70        80        90       100       110       120

             120       130       140       150       160       170 
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPF
       :::::::::::::::::::::::::::::::::::::::.::::.::. ::::. :.:: 
NP_001 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
              130       140       150       160       170       180

             180       190       200       210       220       230 
pF1KB9 FLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFK
       .:::.. . .: ::.::: .::.::.:::.:::::..:::::::..::::::::::::::
NP_001 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
              190       200       210       220       230       240

             240       250       260       270       280       290 
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATE
       ::::::::::::::::::::::::::::::::::::::::::::.:::::.: :::::::
NP_001 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
              250       260       270       280       290       300

             300       310       320       330       340        350
pF1KB9 ILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYT-SSSVNVSSNL
       :::.:::::::.:::::::.::::.:::::.:::.::. : .    :.. ::: ..:..:
NP_001 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
              310       320       330       340       350       360

>>XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemokine  (360 aa)
 initn: 1757 init1: 1757 opt: 1767  Z-score: 1677.4  bits: 318.9 E(85289): 1.1e-86
Smith-Waterman score: 1767; 78.0% identity (90.5% similar) in 346 aa overlap (10-350:15-360)

                    10            20        30        40        50 
pF1KB9      MSNITDPQMWDFDDL-NFT---GMPPADEDYSPCMLETETLNKYVVIIAYALVFL
                     :  .:: :..    .::   : .::  :.  .::: :.: ::::::
XP_016 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
               10        20        30        40        50        60

              60        70        80        90       100       110 
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
               70        80        90       100       110       120

             120       130       140       150       160       170 
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPF
       :::::::::::::::::::::::::::::::::::::::.::::.::. ::::. :.:: 
XP_016 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
              130       140       150       160       170       180

             180       190       200       210       220       230 
pF1KB9 FLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFK
       .:::.. . .: ::.::: .::.::.:::.:::::..:::::::..::::::::::::::
XP_016 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
              190       200       210       220       230       240

             240       250       260       270       280       290 
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATE
       ::::::::::::::::::::::::::::::::::::::::::::.:::::.: :::::::
XP_016 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
              250       260       270       280       290       300

             300       310       320       330       340        350
pF1KB9 ILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYT-SSSVNVSSNL
       :::.:::::::.:::::::.::::.:::::.:::.::. : .    :.. ::: ..:..:
XP_016 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
              310       320       330       340       350       360

>>XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemokine  (360 aa)
 initn: 1757 init1: 1757 opt: 1767  Z-score: 1677.4  bits: 318.9 E(85289): 1.1e-86
Smith-Waterman score: 1767; 78.0% identity (90.5% similar) in 346 aa overlap (10-350:15-360)

                    10            20        30        40        50 
pF1KB9      MSNITDPQMWDFDDL-NFT---GMPPADEDYSPCMLETETLNKYVVIIAYALVFL
                     :  .:: :..    .::   : .::  :.  .::: :.: ::::::
XP_016 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
               10        20        30        40        50        60

              60        70        80        90       100       110 
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
               70        80        90       100       110       120

             120       130       140       150       160       170 
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPF
       :::::::::::::::::::::::::::::::::::::::.::::.::. ::::. :.:: 
XP_016 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
              130       140       150       160       170       180

             180       190       200       210       220       230 
pF1KB9 FLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFK
       .:::.. . .: ::.::: .::.::.:::.:::::..:::::::..::::::::::::::
XP_016 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
              190       200       210       220       230       240

             240       250       260       270       280       290 
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATE
       ::::::::::::::::::::::::::::::::::::::::::::.:::::.: :::::::
XP_016 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
              250       260       270       280       290       300

             300       310       320       330       340        350
pF1KB9 ILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYT-SSSVNVSSNL
       :::.:::::::.:::::::.::::.:::::.:::.::. : .    :.. ::: ..:..:
XP_016 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
              310       320       330       340       350       360

>>NP_001161770 (OMIM: 146928) C-X-C chemokine receptor t  (360 aa)
 initn: 1757 init1: 1757 opt: 1767  Z-score: 1677.4  bits: 318.9 E(85289): 1.1e-86
Smith-Waterman score: 1767; 78.0% identity (90.5% similar) in 346 aa overlap (10-350:15-360)

                    10            20        30        40        50 
pF1KB9      MSNITDPQMWDFDDL-NFT---GMPPADEDYSPCMLETETLNKYVVIIAYALVFL
                     :  .:: :..    .::   : .::  :.  .::: :.: ::::::
NP_001 MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFL
               10        20        30        40        50        60

              60        70        80        90       100       110 
pF1KB9 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCK
               70        80        90       100       110       120

             120       130       140       150       160       170 
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPF
       :::::::::::::::::::::::::::::::::::::::.::::.::. ::::. :.:: 
NP_001 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPV
              130       140       150       160       170       180

             180       190       200       210       220       230 
pF1KB9 FLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFK
       .:::.. . .: ::.::: .::.::.:::.:::::..:::::::..::::::::::::::
NP_001 LLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFK
              190       200       210       220       230       240

             240       250       260       270       280       290 
pF1KB9 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATE
       ::::::::::::::::::::::::::::::::::::::::::::.:::::.: :::::::
NP_001 AHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATE
              250       260       270       280       290       300

             300       310       320       330       340        350
pF1KB9 ILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYT-SSSVNVSSNL
       :::.:::::::.:::::::.::::.:::::.:::.::. : .    :.. ::: ..:..:
NP_001 ILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPSFVGSSSGHTSTTL
              310       320       330       340       350       360

>>NP_004358 (OMIM: 601835) C-C chemokine receptor type 6  (374 aa)
 initn: 808 init1: 232 opt: 877  Z-score: 841.1  bits: 164.2 E(85289): 4.1e-40
Smith-Waterman score: 877; 42.5% identity (75.5% similar) in 327 aa overlap (2-320:9-331)

                      10        20        30         40        50  
pF1KB9        MSNITDPQMWDFDDLNFTGMPPADEDYSPCML-ETETLNKYVVIIAYALVFLL
               :.. : .   : ..: :..  .: ..  : : :.. ...  : :::.:. ..
NP_004 MSGESMNFSDVFDSSEDYFVSVN-TSYYSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVF
               10        20         30        40        50         

             60        70        80        90       100        110 
pF1KB9 SLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNG-WIFGTFLCK
       .:::: ::.... . . .::.:::::::.:.::.::.::::.::.:...: :.:..  ::
NP_004 GLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCK
      60        70        80        90       100       110         

             120       130       140       150          160        
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLV---KFVCLGCWGLSMNLS
       ... .  .::  :.:::.:::.:::.:::.::...  . . .   :..::  ::::. .:
NP_004 LLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIIS
     120       130       140       150       160       170         

      170       180          190       200       210       220     
pF1KB9 LPFFLFRQAYHPNNSSPVC---YEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFT
          :.: : :. ...: ::   :... ..  .:....  :   :::..::. :.::: : 
NP_004 SSTFVFNQKYN-TQGSDVCEPKYQTV-SEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFI
     180       190        200        210       220       230       

         230       240       250       260       270       280     
pF1KB9 LRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGR
       ..:: .:. ...:.:.:::.::::.:: : .:.:.:::. :      ...::. .. :: 
NP_004 VKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLV-TAANLGKMNRSCQSEKLIGY
       240       250       260       270        280       290      

         290       300       310       320       330       340     
pF1KB9 ALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVN
       .  .::.:.::: ::::..::::::.::. :::::                         
NP_004 TKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAGRYSENI
        300       310       320       330       340       350      

         350             
pF1KB9 VSSNL             
                         
NP_004 SRQTSETADNDNASSFTM
        360       370    

>>NP_113597 (OMIM: 601835) C-C chemokine receptor type 6  (374 aa)
 initn: 808 init1: 232 opt: 877  Z-score: 841.1  bits: 164.2 E(85289): 4.1e-40
Smith-Waterman score: 877; 42.5% identity (75.5% similar) in 327 aa overlap (2-320:9-331)

                      10        20        30         40        50  
pF1KB9        MSNITDPQMWDFDDLNFTGMPPADEDYSPCML-ETETLNKYVVIIAYALVFLL
               :.. : .   : ..: :..  .: ..  : : :.. ...  : :::.:. ..
NP_113 MSGESMNFSDVFDSSEDYFVSVN-TSYYSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVF
               10        20         30        40        50         

             60        70        80        90       100        110 
pF1KB9 SLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNG-WIFGTFLCK
       .:::: ::.... . . .::.:::::::.:.::.::.::::.::.:...: :.:..  ::
NP_113 GLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCK
      60        70        80        90       100       110         

             120       130       140       150          160        
pF1KB9 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLV---KFVCLGCWGLSMNLS
       ... .  .::  :.:::.:::.:::.:::.::...  . . .   :..::  ::::. .:
NP_113 LLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIIS
     120       130       140       150       160       170         

      170       180          190       200       210       220     
pF1KB9 LPFFLFRQAYHPNNSSPVC---YEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFT
          :.: : :. ...: ::   :... ..  .:....  :   :::..::. :.::: : 
NP_113 SSTFVFNQKYN-TQGSDVCEPKYQTV-SEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFI
     180       190        200        210       220       230       

         230       240       250       260       270       280     
pF1KB9 LRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGR
       ..:: .:. ...:.:.:::.::::.:: : .:.:.:::. :      ...::. .. :: 
NP_113 VKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLV-TAANLGKMNRSCQSEKLIGY
       240       250       260       270        280       290      

         290       300       310       320       330       340     
pF1KB9 ALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVN
       .  .::.:.::: ::::..::::::.::. :::::                         
NP_113 TKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAGRYSENI
        300       310       320       330       340       350      

         350             
pF1KB9 VSSNL             
                         
NP_113 SRQTSETADNDNASSFTM
        360       370    

>>NP_001495 (OMIM: 300574) C-X-C chemokine receptor type  (368 aa)
 initn: 774 init1: 369 opt: 791  Z-score: 760.3  bits: 149.2 E(85289): 1.3e-35
Smith-Waterman score: 791; 40.2% identity (68.0% similar) in 331 aa overlap (21-348:41-361)

                         10        20        30        40        50
pF1KB9           MSNITDPQMWDFDDLNFTGMPPADEDYSPCMLETETLNKYVVIIAYALVF
                                     ::  .:.:       ....  .   :.:.:
NP_001 LNDAEVAALLENFSSSYDYGENESDSCCTSPPCPQDFS------LNFDRAFLPALYSLLF
               20        30        40              50        60    

               60        70        80        90       100       110
pF1KB9 LLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLC
       ::.::::. :  :.:  :.. : ::..::.::.:: :..::::.::.. .  :.::. ::
NP_001 LLGLLGNGAVAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLC
           70        80        90       100       110       120    

              120       130       140       150        160         
pF1KB9 KVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHL-VKFVCLGCWGLSMNLSL
       ::.. : ..:::.: ::::::: :::: :::::.   .     : ..::. ::: . ..:
NP_001 KVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFAL
          130       140       150       160       170       180    

     170       180         190       200       210       220       
pF1KB9 PFFLFRQAYHPN--NSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLR
       : :.: .:.: .  :..   :    :     : .::.:  . ::..::.:: .::.  : 
NP_001 PDFIFLSAHHDERLNATHCQY----NFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILA
          190       200           210       220       230       240

       230       240       250       260       270       280       
pF1KB9 TLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRAL
       .:. ..  .. ::::.. .::. : ::: ::.::.:.: ::   .. ..: :.. .  : 
NP_001 VLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAK
              250       260       270       280       290       300

       290       300       310       320       330       340       
pF1KB9 DATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVNVS
       ..:  ::..: ::::..:::.: .::. .  .:   :  ... : :.  .:  .:: . .
NP_001 SVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSET
              310       320       330       340       350       360

       350     
pF1KB9 SNL     
       :       
NP_001 SEASYSGL
               




350 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 19:36:00 2016 done: Fri Nov  4 19:36:01 2016
 Total Scan time:  7.030 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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