GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:34:45

Sequence gi568815581r:50762983_50964017 : 201035 bp : 49.03% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -    638    415  224  0  2   44  116   100 0.420   6.25
 1.05 Intr -   1266   1183   84  1  0  100   40    57 0.582   1.89
 1.04 Intr -   5503   5406   98  0  2  127   42    34 0.013   2.35
 1.03 Intr -  18539  18245  295  0  1    8   53   295 0.010  14.07
 1.02 Intr -  30263  30127  137  1  2   62   94    75 0.337   5.71
 1.01 Init -  34646  34351  296  2  2   84   39   191 0.298  10.46
 1.00 Prom -  36389  36350   40                             -11.04

 2.00 Prom +  37773  37812   40                              -5.16
 2.01 Init +  37841  37944  104  1  2   78  -14    80 0.426  -3.49
 2.02 Term +  38016  38268  253  0  1   45   42   296 0.552  15.81
 2.03 PlyA +  40005  40010    6                              -0.45

 3.05 PlyA -  40206  40201    6                               1.05
 3.04 Term -  40543  40358  186  1  0   71   46   143 0.263   5.89
 3.03 Intr -  55251  55137  115  2  1   86  115    31 0.779   6.05
 3.02 Intr -  57578  57528   51  1  0   82   63    57 0.398   0.62
 3.01 Init -  69399  69392    8  0  2  108   77     0 0.229   1.42
 3.00 Prom -  70700  70661   40                              -7.56

 4.00 Prom +  72671  72710   40                              -6.26
 4.01 Init +  72956  73165  210  1  0   77  109   309 0.927  28.69
 4.02 Intr +  73327  73422   96  0  0  -12  109   118 0.391   4.11
 4.03 Intr +  73438  73578  141  0  0  -63  109   137 0.552   1.25
 4.04 Intr +  73594  73695  102  0  0  -87  109   151 0.489   0.07
 4.05 Intr +  73711  73812  102  0  0  -87  109   151 0.487   0.07
 4.06 Term +  76517  78037 1521  1  0  111   48  2285 0.977 217.31
 4.07 PlyA +  83966  83971    6                               1.05

 5.02 PlyA -  88125  88120    6                               1.05
 5.01 Sngl - 101035  99998 1038  1  0   74   42   623 0.980  53.43
 5.00 Prom - 101654 101615   40                              -3.66

 6.00 Prom + 101789 101828   40                              -9.65
 6.01 Init + 102059 102061    3  1  0   53   91     0 0.778  -3.20
 6.02 Term + 102298 103203  906  0  0  -39   55   419 0.499  18.20
 6.03 PlyA + 104311 104316    6                               1.05

 7.00 Prom + 106003 106042   40                              -3.66
 7.01 Init + 116068 116129   62  0  2   74  115    18 0.093   3.82
 7.02 Intr + 137249 137398  150  2  0   92   82   160 0.579  15.08
 7.03 Intr + 155096 155214  119  2  2   93  110    41 0.065   6.91
 7.04 Intr + 160778 160839   62  0  2   70   75    57 0.024   1.05
 7.05 Intr + 174323 174463  141  1  0  114  -33   105 0.010   1.55
 7.06 Intr + 179529 179704  176  2  2   98   82    11 0.005   0.24
 7.07 Intr + 187466 187533   68  2  2  119   49    91 0.909   6.85
 7.08 Intr + 187929 188003   75  1  0  153   32    57 0.896   6.09
 7.09 Term + 194301 194584  284  1  2   27   38   208 0.396   5.29
 7.10 PlyA + 195600 195605    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  18539  18241  299  0  2    8   54   308 0.957  14.83
S.002 Init -  21882  21840   43  0  1   76   44    60 0.823   0.98
S.003 Init +  25301  25373   73  1  1  104   75    79 0.960   9.43
S.004 Term +  26285  26304   20  0  2  134   49     0 0.886  -0.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:50762983_50964017|GENSCAN_predicted_peptide_1|378_aa
METVLFTFHRFAGDKGYLMKEGLKVLMGKEFLGFLENQKDPLAADITMKDMDQCQDSTLN
FQNLFSLTAGLTTVDNNYFVVPMKQKGTKQAELSNYSALIDTQHTSGSSGGVQIGQAQDN
ILFREGKNRRCKAGSDDSDDAIWPERRRESPSGNHPETQKIEFATALRGRHTRRDRPGLK
TRHGSQRGLTMGTSRSVVALLLRLGGRAPSGGFLVTHTQPGRQEDRRLPGTATLDTQKPG
DFQKTHQHAGKTASAWQPGDPGPVPGLCLAGHVTSGEYKQEGTNPHLPTTDPSDNKKPSD
TCLGILFPLQTVFEFMGDLELVFKVRIQNPKENDFIEIELKRQELSYQNLLNVSCCELGI
KPERVEKIRKLPNTLLRK

>gi568815581r:50762983_50964017|GENSCAN_predicted_CDS_1|1134_bp
atggaaaccgtgttgtttacgtttcacagatttgccggggataaaggctacttaatgaag
gagggcctgaaagtactcatgggaaaggagttccttggatttttggagaatcaaaaagac
cctctggctgcagacataacaatgaaggacatggaccagtgccaagacagcacactgaac
ttccagaacttgttttcactcactgcggggctcaccactgtggacaacaactattttgta
gtacctatgaagcagaagggaacgaagcaggcagaactaagcaattactcagcccttata
gacacacaacacacttccggatccagtggtggggtgcagatagggcaagcacaggacaac
atcctcttcagagaagggaagaacagaagatgcaaagcaggctctgatgacagcgatgat
gccatttggccagagagacggcgcgagagccccagtgggaaccacccggagacccagaag
atcgaattcgccactgcgctgcgcggccgccacactcgccgggatcggccgggtttgaag
acgcgccatggaagccagaggggtctgacgatggggacctctcggagcgtcgtcgccctg
ctactgcgccttggcggccgcgctccatctggaggcttcctcgtgacgcatacgcagcct
ggccgccaagaagaccgtcgcctgcctgggacagccaccctggacacccagaagccagga
gatttccaaaagacacaccagcatgctgggaagacagcatcggcctggcagccaggtgac
ccaggtccagtgccaggcctgtgcctggctggccacgtgactagtggtgaatataaacaa
gaaggcacaaatccacacttgccaacaacggacccaagtgataacaagaaacccagtgac
acctgtctaggtattttgtttcctttacaaactgtatttgaatttatgggtgatttagag
cttgtgtttaaagtcagaattcagaaccccaaagaaaatgacttcattgaaattgaactg
aagagacaagaactgagttaccaaaacctactaaacgtgagttgctgtgaactggggatt
aaaccagaacgagtggagaagatcagaaagctaccaaacacactgctcagaaag

>gi568815581r:50762983_50964017|GENSCAN_predicted_peptide_2|118_aa
MGLSVASDAAKKSSDARTECIIGFGDWEVASVSAASYEGWGAAFLEEEEEEEEEEKEEEE
EEEEGEELLLIKFPWALLAEQELQLAAALGPFTLDGSLSESLPPGSKVLHCSSKEPPL

>gi568815581r:50762983_50964017|GENSCAN_predicted_CDS_2|357_bp
atgggattgtcagtagcatcagatgcagccaagaagtcaagtgatgcaagaactgaatgt
atcattggctttggtgattgggaggtggcctccgtgagtgcagccagttatgaaggctgg
ggagcagccttcttagaggaggaggaggaagaggaggaagaggagaaggaggaagaggag
gaggaggaggagggggaagagctgctcctgatcaagttcccttgggcattgctggctgag
caggagcttcagcttgcagctgctttgggaccattcaccctggatggaagcctgagtgaa
tcattacccccagggtctaaggtgctgcattgtagcagcaaagagcccccattataa

>gi568815581r:50762983_50964017|GENSCAN_predicted_peptide_3|119_aa
MGSVSISKAEEPMTVRIWAKIVTALCFLTSCPRGIFLLILLVSTEKSPLPGDSPNSSQVQ
GAGLEGGGLELLKPTGAGSLTVACEVFRDTPVAAILSFLVSFQSGPVVWFGFDSFEYTS

>gi568815581r:50762983_50964017|GENSCAN_predicted_CDS_3|360_bp
atggggagcgtttccatatcaaaagcagaagaacccatgactgtccgcatttgggccaaa
attgtcactgctctctgctttctgacttcctgtccccggggaattttcctgctcatcctg
ctagtctccactgagaaatcacctcttcctggtgattccccaaattcgagccaggtgcag
ggggcaggactggaaggaggtggcctggagctgctgaagcccacaggggctgggtctcta
acggtggcctgtgaggtcttcagagacaccccagttgctgccattctcagcttcctggtg
tccttccaatcggggcctgttgtttggtttggttttgactcgtttgagtatacttcctag

>gi568815581r:50762983_50964017|GENSCAN_predicted_peptide_4|723_aa
MWAPRCRRFWSRWEQVAALLLLLLLLGVPPRSLALPPIRYSHAGICPNDMNPNLWVDAQS
TCRRECETDQECEMDQVSGIQKPQCEADQVNGVQKPQCEMDQKWECEVDQVSGVQKPVCE
ADQVSGVQKPQCEMDQVSGIQKLECEADQKWEYEVDQVSGVQKPQCEMDQVSGIQKLECE
ADQKWEYEVDQVSGVQKPQCEMDQVSGIQKLECEADQECETYEKCCPNVCGTKSCVAARY
MDVKGKKGPVGMPKEATCDHFMCLQQGSECDIWDGQPVCKCKDRCEKEPSFTCASDGLTY
YNRCYMDAEACSKGITLAVVTCRYHFTWPNTSPPPPETTMHPTTASPETPELDMAAPALL
NNPVHQSVTMGETVSFLCDVVGRPRPEITWEKQLEDRENVVMRPNHVRGNVVVTNIAQLV
IYNAQLQDAGIYTCTARNVAGVLRADFPLSVVRGHQAAATSESSPNGTAFPAAECLKPPD
SEDCGEEQTRWHFDAQANNCLTFTFGHCHRNLNHFETYEACMLACMSGPLAACSLPALQG
PCKAYAPRWAYNSQTGQCQSFVYGGCEGNGNNFESREACEESCPFPRGNQRCRACKPRQK
LVTSFCRSDFVILGRVSELTEEPDSGRALVTVDEVLKDEKMGLKFLGQEPLEVTLLHVDW
ACPCPNVTVSEMPLIIMGEVDGGMAMLRPDSFVGASSARRVRKLREVMHKKTCDVLKEFL
GLH

>gi568815581r:50762983_50964017|GENSCAN_predicted_CDS_4|2172_bp
atgtgggccccaaggtgtcgccggttctggtctcgctgggagcaggtggcagcgctgctg
ctgctgctgctactgctcggggtgcccccgcgaagcctggcgctgccgcccatccgctat
tcccacgccggcatctgccccaacgacatgaatcccaacctctgggtggacgcacagagc
acctgcaggcgggagtgtgagacggaccaggagtgtgagatggaccaggtgagtgggatc
cagaagccacagtgtgaggcagaccaggtgaatggggtccagaagccgcaatgtgagatg
gaccagaagtgggagtgtgaggttgaccaggtgagtggggtccagaagccggtgtgtgag
gcggaccaggtgagtggggtccagaagccacagtgtgagatggaccaggtgagtgggatc
cagaagctggagtgtgaggcggaccagaagtgggagtatgaggtggaccaggtgagtggg
gtccagaagccacagtgtgagatggaccaggtgagtgggatccagaagctggagtgtgag
gcggaccagaagtgggagtatgaggtggaccaggtgagtggggtccagaagccacagtgt
gagatggaccaggtgagtgggatccagaagctggagtgtgaggcggaccaggagtgtgag
acctatgagaagtgctgccccaacgtatgtgggaccaagagctgcgtggcggcccgctac
atggacgtgaaagggaagaagggcccagtgggcatgcccaaggaggccacatgtgaccac
ttcatgtgtctgcagcagggctctgagtgtgacatctgggatggccagcccgtgtgtaag
tgcaaagaccgctgtgagaaggagcccagctttacctgcgcctcggacggcctcacctac
tataaccgctgctacatggatgccgaggcctgctccaaaggcatcacactggccgttgta
acctgccgctatcacttcacctggcccaacaccagccccccaccacctgagaccaccatg
caccccaccacagcctccccagagacccctgagctggacatggcggcccctgcgctgctc
aacaaccctgtgcaccagtcggtcaccatgggtgagacagtgagcttcctctgtgatgtg
gtgggccggccccggcctgagatcacctgggagaagcagttggaggatcgggagaatgtg
gtcatgcggcccaaccatgtgcgtggcaacgtggtggtcaccaacattgcccagctggtc
atctataacgcccagctgcaggatgctgggatctacacctgcacggcccggaacgtggct
ggggtcctgagggctgatttcccgctgtcggtggtcaggggtcatcaggctgcagccacc
tcagagagcagccccaatggcacggctttcccggcggccgagtgcctgaagcccccagac
agtgaggactgtggcgaagagcagacccgctggcacttcgatgcccaggccaacaactgc
ctgaccttcaccttcggccactgccaccgtaacctcaaccactttgagacctatgaggcc
tgcatgctggcctgcatgagcgggccgctggccgcgtgcagcctgcccgccctgcagggg
ccctgcaaagcctacgcgcctcgctgggcttacaacagccagacgggccagtgccagtcc
tttgtctatggtggctgcgagggcaatggcaacaactttgagagccgtgaggcctgtgag
gagtcgtgccccttccccagggggaaccagcgctgtcgggcctgcaagcctcggcagaag
ctcgttaccagcttctgtcgcagcgactttgtcatcctgggccgagtctctgagctgacc
gaggagcctgactcgggccgcgccctggtgactgtggatgaggtcctaaaggatgagaaa
atgggcctcaagttcctgggccaggagccattggaggtcactctgcttcacgtggactgg
gcatgcccctgccccaacgtgaccgtgagcgagatgccgctcatcatcatgggggaggtg
gacggcggcatggccatgctgcgccccgatagctttgtgggcgcatcgagtgcccgccgg
gtcaggaagcttcgtgaggtcatgcacaagaagacctgtgacgtcctcaaggagtttctt
ggcttgcactga

>gi568815581r:50762983_50964017|GENSCAN_predicted_peptide_5|345_aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHI
GEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
GCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTA
TFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLGSQQQP
QQQQQPAQPPPPPPPPQQQQQQKTSALSPNAKEFIFPNMQGQGSSTNGMFPGDSPLNLSP
LQYSNAFDVFAAYGGLNEKSFVDGLNFSLNNMQYSNQQFQPVMAN

>gi568815581r:50762983_50964017|GENSCAN_predicted_CDS_5|1038_bp
atgcagcttgaaatccaagtagcactaaattttattatttcgtatttgtacaataagctt
cccaggagacgtgtcaacatttttggtgaagaacttgaaagacttcttaagaagaaatat
gaagggcactggtatcctgaaaagccatacaaaggatcggggtttagatgtatacacata
ggggagaaagtggacccagtgattgaacaagcatccaaagagagtggtttggacattgat
gatgttcgtggcaatctgccacaggatcttagtgtttggatcgacccatttgaggtttct
taccaaattggtgaaaagggaccagtgaaggtgctttacgtggatgataataatgaaaat
ggatgtgagttggataaggagatcaaaaacagctttaacccagaggcccaggtttttatg
cccataagtgacccagcctcatcagtgtccagctctccatcgcctccttttggtcactct
gctgctgtaagccctaccttcatgccccggtccactcagcctttaacctttaccactgcc
acttttgctgccaccaagttcggctctaccaaaatgaagaatagtggccgtagcaacaag
gttgcacgtacttctcccatcaacctcggcttgaatgtgaatgacctcttgaagcagaaa
gccatctcttcctcaatgcactctctgtatgggcttggcttgggtagccagcagcagcca
cagcaacagcagcagccagcccagccgccaccgccaccaccaccaccacagcagcaacaa
cagcagaaaacctctgctctttctcctaatgccaaggaatttatttttcctaatatgcag
ggtcaaggtagtagtaccaatggaatgttcccaggtgacagcccccttaacctcagtcct
ctccagtacagtaatgcctttgatgtgtttgcagcctatggaggcctcaatgagaaatct
tttgtagatggcttgaattttagcttaaataacatgcagtattctaaccagcaattccag
cctgttatggctaactaa

>gi568815581r:50762983_50964017|GENSCAN_predicted_peptide_6|302_aa
MPECRQRQLIKPNCLKVQPSEIQARWKVVTKQRLKTGRSVKNYINSQLDLIRFLLTALGA
QALQQQQQQEEVEVEEEESTSLLGEGGGRPGKWKSNLSRLGTQHRAGRGAGSAAPLPRRN
PTRCSPPRGPRPGLLGAGQSLGEHRFLGTIFSLAATGPSNPSVPPRARRSSGHPNPPIPV
SSPRAARPRPTAQDEPDAPAAPRSRSPRVLALPPRRPGPRPRRPRAPEGPGLDAAAAPPP
PPGPGAPVSSPTPPGAPRYLRAASGRLGPQTRGWAGSSAAGRGRGRVGSGELAECKTLPL
RG

>gi568815581r:50762983_50964017|GENSCAN_predicted_CDS_6|909_bp
atgcctgagtgccggcagaggcagctgattaagcccaattgcttgaaggtgcagccgagc
gaaattcaggctcggtggaaggtagttacaaagcaacgccttaagacaggcaggagtgtg
aagaattacataaacagccagttagatctcattagatttctgctcacagccctcggagcc
caagcgctacagcagcagcaacagcaagaggaggtggaggtggaggaggaagagagtacg
agcctcctcggagaaggaggaggaaggcccgggaaatggaagagcaacctctcccggctg
ggcacccagcaccgagcaggtcggggcgccgggtcagccgctcccctcccccgccgtaac
ccgacccgctgctccccgccccgtggcccccgccccgggctcctgggagccggccagagc
ctgggggagcaccggttcctcggcaccattttcagcctcgcggccaccggcccctcgaac
cccagcgttccaccgcgagctcgtcgctcctccgggcaccccaaccccccaattcccgtc
agctcgccccgggccgcccgtccccggccaactgcccaggacgagcccgacgcgccggcg
gcccctcggagccgctcccctcgggtcctggcgctgccccctcggcgcccagggccgcga
ccccgccgtccccgagctcccgagggcccagggctcgacgccgctgcagcccctcctccg
ccgcctgggcccggggctcccgtctcctcgccgaccccgcccggcgccccgagatactta
cgggctgcttcggggcggcttggaccacagacccgcggctgggcggggagcagcgcggca
gggcgggggcgcgggagggtcgggagcggcgagctcgccgagtgcaagacgttgccgctg
cggggctga

>gi568815581r:50762983_50964017|GENSCAN_predicted_peptide_7|378_aa
MEKNWFKIYLQKRHKAKVVLRKKKEWTGSAESGGCVEAARASERSSQCRSTIWDTGGIQG
PSQDIQGMWTRAPRWVALPPQDTGLGPPLQNRFEAKQWHVTVQLSRRPQQGTSGSEILAT
VQGIEVLPENKDPIQDLTFYVVVIVLPPEAPLGCDHFSDFYFDENILMTLTVLRSPGLPS
SYLIVMHCVTAIQTAHFEFPCAACLDGGLSLCPESRLHGKSSGSQFGCLWVRSSCGGSAL
PQAPPGRLHQVCAPAVTPSGHPCITLLDTRSLSPASLTSSTMLLGFIPMPRDKLVRQTKQ
FVPSGAGYMILSIKDLSTFVTIGIWLGMKAASPHNPSCNGRDGPPSKDVTLNIALQGIQA
KSVLVPKDNYNWGLREMR

>gi568815581r:50762983_50964017|GENSCAN_predicted_CDS_7|1137_bp
atggaaaaaaactggtttaagatctacctccaaaaaagacacaaagccaaggtggtttta
cgaaagaaaaaggaatggacagggtcagcagaatctggaggctgcgttgaagctgcccgt
gcttctgaacgaagcagccagtgccgctcgaccatctgggacaccggtggaattcagggc
ccctctcaggacattcagggcatgtggacaagggcaccccgatgggtggctctgccaccc
caggacactggactggggccacccttacagaaccggttcgaagccaaacaatggcacgtc
acagtccagctgagccggaggcctcagcagggcaccagtggatctgagattttggcaaca
gtccagggcattgaggttttgccagaaaataaggatcccatccaggatctcacattctac
gtcgttgtcattgtcttgcctcctgaggctcctcttggctgtgaccacttctcggacttt
tattttgatgaaaatattttgatgaccctgacagttttgagaagtcctggtttgccctct
tcttacttgattgtgatgcattgtgttactgccatccagactgcccatttcgagttcccg
tgtgcagcctgcctggacggaggccttagcctctgccctgagtcccggttgcatgggaag
tcctctgggtctcagtttggatgtttgtgggtgaggagcagctgcggtgggtcggccttg
ccgcaggcaccccctggacggctgcaccaggtctgcgcgccagcggtgacccccagtggt
cacccttgcattactctcctggacactcgtagcctctcacctgcgtcactgacatcctca
acgatgctgctggggttcatcccgatgcctcgggacaaactggtgcgtcaaacaaagcag
tttgtaccaagtggtgcaggctacatgattctctccattaaggatctgagcacgtttgtg
actattgggatctggctgggcatgaaggctgctagtccacacaacccaagttgcaatgga
agagacggcccaccctcaaaggatgtcaccttgaacatagccttacagggcatccaagcc
aagtccgtgcttgtccccaaggacaactacaactggggactcagagagatgagatga