GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:09:37

Sequence gi568815587r:27557824_27758564 : 200741 bp : 40.16% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  23818  24231  414  0  0   53   42   523 0.055  38.48
 1.02 PlyA +  24261  24266    6                               1.05

 2.00 Prom +  42089  42128   40                              -5.35
 2.01 Init +  44100  44202  103  2  1  105   54    92 0.621   7.95
 2.02 Term +  47453  47532   80  0  2  105   54    20 0.285  -2.75
 2.03 PlyA +  47814  47819    6                               1.05

 3.00 Prom +  64021  64060   40                              -5.95
 3.01 Sngl +  66361  66672  312  0  0   56   48   286 0.807  17.08
 3.02 PlyA +  66789  66794    6                              -0.45

 4.00 Prom +  66801  66840   40                              -6.75
 4.01 Init +  73605  73644   40  2  1   68   59    55 0.514   1.01
 4.02 Intr +  74428  74609  182  2  2  -40  109   234 0.560  11.37
 4.03 Term +  79704  79967  264  2  0   47   47   174 0.529   3.72
 4.04 PlyA +  81424  81429    6                               1.05

 5.00 Prom +  84768  84807   40                               0.35
 5.01 Init +  88020  88088   69  2  0   72  105    56 0.884   6.80
 5.02 Term +  88201  88317  117  0  0  111   40    92 0.888   4.26
 5.03 PlyA +  91990  91995    6                               1.05

 6.05 PlyA -  94569  94564    6                               1.05
 6.04 Term - 100762  99998  765  1  0   90   40   610 0.359  48.82
 6.03 Intr - 108387 108190  198  0  0   61   36   153 0.001   6.03
 6.02 Intr - 116401 116237  165  1  0   21  113   117 0.219   6.74
 6.01 Init - 124946 124860   87  2  0   78   87    55 0.469   5.09
 6.00 Prom - 125070 125031   40                              -3.65

 7.05 PlyA - 125830 125825    6                               1.05
 7.04 Term - 129806 129374  433  1  1    1   41   322 0.064  12.58
 7.03 Intr - 141823 141621  203  1  2   69   57   139 0.045   6.06
 7.02 Intr - 143011 142853  159  1  0   97   78    37 0.450   2.86
 7.01 Init - 145070 144945  126  2  0   77   66    92 0.937   6.11
 7.00 Prom - 159609 159570   40                              -4.75

 8.00 Prom + 159778 159817   40                              -4.95
 8.01 Init + 165111 165490  380  2  2   57    0   386 0.248  23.12
 8.02 Intr + 173067 173142   76  0  1   68  115    15 0.222   0.80
 8.03 Intr + 173848 173978  131  0  2  105   39    47 0.087   0.07
 8.04 Intr + 180954 181017   64  0  1   36  121    54 0.029   1.30
 8.05 Intr + 193949 194084  136  1  1   17   97   108 0.090   3.82
 8.06 Term + 197304 197440  137  1  2   31   50   112 0.120  -1.10
 8.07 PlyA + 197489 197494    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 129712 129374  339  1  0   69   41   261 0.924  15.28


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:27557824_27758564|GENSCAN_predicted_peptide_1|137_aa
RGCGVCCCCPSFTMPPKDDKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLV
LFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAKVI
YTRNTKGGDAAAAGEDA

>gi568815587r:27557824_27758564|GENSCAN_predicted_CDS_1|414_bp
cgaggctgcggtgtctgctgctgctgtccgagcttcacaatgccacccaaggatgacaag
aagaaggatgctggaaagtcggccaagaaagacaaagacccagttaacaaatccgggggc
aaggccaaaaagaagaagtggtccaaaggcaaagttcgggacaagctcaataacttagtc
ttgtttgacaaagctacctatgacaaactctgtaaggaagttcccaattataaacttata
accccagctgtggtctctgagagactgaagattcgaggctccctggccagggcagccctt
caggagctccttagtaaaggacttatcaaactggtttcaaagcacagagctaaagtaatt
tacaccagaaataccaagggcggagatgctgcagctgctggtgaagatgcatga

>gi568815587r:27557824_27758564|GENSCAN_predicted_peptide_2|60_aa
MERSMPLEQDLLLTFPKRRGYTTPRRATEKAPGFGFHSESSGEECLREVVGFQDALHLPS

>gi568815587r:27557824_27758564|GENSCAN_predicted_CDS_2|183_bp
atggagaggtcaatgccattggaacaagacttattacttacatttcccaagagaagggga
tatacgacaccacgcagggccacagagaaagcaccaggttttggattccattcagaatcc
tctggagaagagtgtcttagggaagtagtaggatttcaggatgccctgcatctgccttcc
tga

>gi568815587r:27557824_27758564|GENSCAN_predicted_peptide_3|103_aa
MLEGQDRDAKSDVRMEEPTKWAIGDTVEEWSDSSKRVRSRNSAEMHTQPRSYPALNDSEL
AWNGHPKTKIHGRGDTGSTGSGPGHQVGETVGDGGEEGIDDEP

>gi568815587r:27557824_27758564|GENSCAN_predicted_CDS_3|312_bp
atgttggaaggtcaagacagagatgccaaatcagatgtcaggatggaggagccaacaaaa
tgggcaataggggacacagttgaggaatggagtgacagtagcaagagagtgagaagtagg
aactcagcagagatgcacacccagccaagaagttaccctgcattaaatgacagtgagctg
gcctggaatggacaccccaaaaccaagatccatggcagaggggacactggcagtacaggg
tctggccctggacatcaggtgggtgaaactgttggggatggaggagaagaaggcattgat
gatgaaccatga

>gi568815587r:27557824_27758564|GENSCAN_predicted_peptide_4|161_aa
MGAVCEALQQYSLEGDRLAFHCESYPKLCVCDGLGGFRGHRAVSVFSCEAEKIWEGVSQR
ALGQSSRASGSGCQWKQNTHNATDIGHLVQHPTSTWQDSNFFPLVPVVFDLHKVGNGDLH
LGIQWVISGQDEEQSQTRSRAVKLLSGLTECDQIDKESSLS

>gi568815587r:27557824_27758564|GENSCAN_predicted_CDS_4|486_bp
atgggggctgtctgtgaagctttgcagcagtacagcctagaaggggacaggcttgccttc
cactgtgagagttacccgaagctctgcgtctgtgatggtctagggggcttccgaggccat
cgggcagtgtcagtcttcagctgcgaagccgagaagatctgggaaggagtcagtcagaga
gccttgggccagagttccagggcctctgggagtggctgccagtggaagcaaaatacacat
aacgctacagacattggtcaccttgttcagcacccaacatcgacctggcaagactcgaac
tttttcccgttggtccctgttgtctttgatctacacaaagtggggaatggtgacctccat
ctgggaattcaatgggtgatctctgggcaagatgaagagcagtcacaaacccgatccagg
gctgttaaacttctttcaggactcactgaatgtgaccagatagataaggagagttctctg
agttag

>gi568815587r:27557824_27758564|GENSCAN_predicted_peptide_5|61_aa
MGWKAAVIAQARCNEDLNQSSGKGHVLDKGETGCSLAVSDVTTPNFPLDKRRPKIASGPI
G

>gi568815587r:27557824_27758564|GENSCAN_predicted_CDS_5|186_bp
atgggttggaaggctgctgtgatagcccaggcgagatgcaatgaagacctgaaccagagt
agtggaaagggacatgtcctggataagggtgaaactggatgctccttggcagtttcagat
gtcaccacccctaactttccattggataaaagaaggcccaaaatagcctctggtcccata
ggctag

>gi568815587r:27557824_27758564|GENSCAN_predicted_peptide_6|404_aa
MEYYAAIKKDEFMSFAGTWMKLETIILGKNAEFLQKGLQVHTCFGVYPHASVWHDCASQK
KGCAVYLHVSVEFNKLIPENGFIKSGPSAAGLLEFAGGPLQTLFAWVSPAEAAEQQILQN
GKCCSLIVPLEASSQRGTWPYEVSVGPYWEFHQVRRVMTILFLTMVISYFGCMKAAPMKE
ANIRGQGGLAYPGVRTHGTLESVNGPKAGSRGLTSLADTFEHVIEELLDEDQKVRPNEEN
NKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDS
ISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRH
WNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR

>gi568815587r:27557824_27758564|GENSCAN_predicted_CDS_6|1215_bp
atggaatactatgcagccataaaaaaggatgagttcatgtcctttgcagggacatggatg
aagctggaaaccatcattcttggcaagaatgctgagtttctacagaaagggttgcaggtc
cacacatgttttggcgtctacccacacgcttctgtatggcatgactgtgcatcccagaag
aagggctgtgctgtgtacctccacgtttcagtggaatttaacaaactgatccctgaaaat
ggtttcataaagtcaggaccctcagctgcaggtctgttggagtttgctggaggtccactc
cagaccctgtttgcttgggtatcaccagcagaggctgcagaacagcaaatattgcagaac
ggcaaatgttgctccctgattgttcctctggaagcttcgtctcagaggggcacctggccg
tatgaggtgtcagtcggcccctactgggagttccaccaggtgagaagagtgatgaccatc
cttttccttactatggttatttcatactttggttgcatgaaggctgcccccatgaaagaa
gcaaacatccgaggacaaggtggcttggcctacccaggtgtgcggacccatgggactctg
gagagcgtgaatgggcccaaggcaggttcaagaggcttgacatcattggctgacactttc
gaacacgtgatagaagagctgttggatgaggaccagaaagttcggcccaatgaagaaaac
aataaggacgcagacttgtacacgtccagggtgatgctcagtagtcaagtgcctttggag
cctcctcttctctttctgctggaggaatacaaaaattacctagatgctgcaaacatgtcc
atgagggtccggcgccactctgaccctgcccgccgaggggagctgagcgtgtgtgacagt
attagtgagtgggtaacggcggcagacaaaaagactgcagtggacatgtcgggcgggacg
gtcacagtccttgaaaaggtccctgtatcaaaaggccaactgaagcaatacttctacgag
accaagtgcaatcccatgggttacacaaaagaaggctgcaggggcatagacaaaaggcat
tggaactcccagtgccgaactacccagtcgtacgtgcgggcccttaccatggatagcaaa
aagagaattggctggcgattcataaggatagacacttcttgtgtatgtacattgaccatt
aaaaggggaagatag

>gi568815587r:27557824_27758564|GENSCAN_predicted_peptide_7|306_aa
MEAGLFLAGILEFTEVLSLVLHCVNVGKLFPGRGSDSSFIKRRPQPGFLQRARDAGFPGA
EAGAGTPLEAAGVLSKAPQEGAGLAGRCRGALGEEELRLKWTYKSEANVAWKTWEAEFLP
LGTERVCDTLGQAEPTSLPILRPSSEAPSREVKSFDFRGVVGMNSININKKDVHTKTPYK
GRQHQRSNIDKSTRMRKIQHKKAENSKNQNASSPPREHNSLPAREQNWMENEFDELTEVC
FRKWVKTDSSKLKEHALTQCKEAKNLEKRLEELLTRITSLEKNINDLMELKNTARELCEA
YTSFNN

>gi568815587r:27557824_27758564|GENSCAN_predicted_CDS_7|921_bp
atggaagcagggttatttctagcaggaattcttgagttcactgaagtcttgtccctggta
cttcactgtgtgaacgtgggtaaattatttcctggcagaggatcggattcttcttttata
aaacggcgcccacagccggggtttctgcagagggcgcgggacgcggggttccccggggct
gaggctggggctggaacacccctcgaagccgcgggcgtcctgtccaaggcgccccaggag
ggcgcaggactcgcagggcgatgtcgcggggccctaggggaggaggaattgagactgaag
tggacttacaagtccgaagccaatgtagcttggaaaacttgggaggcggaattcctaccg
ctgggaactgaaagggtctgcgacactctcgggcaggccgaacccacatctctacccatc
ctgcgcccctcttctgaagcgccctccagggaagttaagagttttgactttcggggagtg
gttgggatgaatagcatcaacatcaacaaaaaggatgtccacacgaaaaccccgtacaaa
ggtcgccaacatcaaagatcaaacatagataaatccacaaggatgaggaaaatccagcac
aaaaaggctgaaaattccaaaaaccagaatgcctcttctcctccaagggagcacaactct
ttgccagcaagggaacaaaactggatggagaatgagtttgatgaattgacagaagtatgc
ttcagaaagtgggtaaaaacagactcctccaagctaaaggagcatgctctaacccaatgc
aaagaagctaagaaccttgaaaaaaggttggaggaattgctaactagaataactagttta
gagaagaacataaatgacctaatggagctgaaaaacacagcacgagaactctgtgaagca
tacacaagcttcaataactga

>gi568815587r:27557824_27758564|GENSCAN_predicted_peptide_8|307_aa
MWGRLRKSREIGNNSSFGNVPQPREALTQGIFPLKLPFAYPQPSLAQQSRRTRDECRPVV
MEMSVALRSASALGSPQTHFRFRRFGTDTMILLALSSHQGEPTNGVTGPGRGAIDCRDEA
QRCCRRWSCFVLTEKVRCHYEGIGVWTEIWIQERRLVGKDAPYYFKDTSQKLDKLLLLIH
CCPKLSHKAKSSSYIGSPATLNCEEAIVGALLSRGAKVVEKRHQNEQSVIFSATKMLSSE
YNGKTLGYFSRAESLCLEHIFLRQVCPRGIAKIKSGLGGKGGGRKKLLGRRPEVSSIMLP
KTAVKIK

>gi568815587r:27557824_27758564|GENSCAN_predicted_CDS_8|924_bp
atgtggggacgactccggaaatctcgggaaataggcaataactcgagctttggcaacgtc
ccccagcctagggaggcgctaacgcaaggtatctttccactgaagctgccctttgcctac
cctcagccatcgctagcacagcagagcagaagaaccagggatgaatgtagaccagttgtt
atggagatgtccgtcgctctgaggagcgctagtgccctgggaagtccccagacgcatttc
aggtttcgtcgttttggcactgacaccatgattttactcgctctgagttcccaccaaggg
gagcccaccaacggcgtcacaggccctggccgtggcgctattgactgcagggatgaggca
cagcgatgctgcagaagatggtcttgttttgtgctcacggagaaagtaaggtgccattat
gaagggattggggtttggactgagatttggattcaggaaagaagactggttgggaaggat
gcaccctattactttaaggacacttctcagaagttggacaaattgctcttgcttatacat
tgttgcccaaaacttagtcataaggccaaatctagctcctacataggttctccagccact
ttgaactgtgaagaagccattgtaggagccttgctaagtagaggggcaaaggtggtcgaa
aaacgacaccagaatgaacaatcagtcatattttctgccacaaaaatgctgtcctcagag
tataatggaaagacactgggctacttctcgagagcagaatccttatgcttggaacatatc
tttctaagacaggtctgtccacggggaatagccaaaattaaatcaggtcttggtggcaag
ggaggaggacgaaaaaagctgttgggtaggcgaccagaagtgtcttcgataatgttacct
aagactgctgtgaagattaaatga