GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:03:28

Sequence gi568815575r:103153629_103353979 : 200351 bp : 39.37% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3144   3252  109  2  1   46  100    83 0.535   5.73
 1.02 Intr +   7056   7189  134  1  2   58   96   122 0.959   9.44
 1.03 Intr +  28410  28433   24  2  0  108   88     7 0.339   0.00
 1.04 Intr +  29256  29327   72  2  0   59   89    58 0.511   1.68
 1.05 Term +  52858  53127  270  0  0   -2   38   233 0.047   3.80
 1.06 PlyA +  54869  54874    6                               1.05

 2.00 Prom +  55109  55148   40                              -6.05
 2.01 Init +  61714  61887  174  0  0   83   37   270 0.745  18.79
 2.02 Intr +  62061  62136   76  2  1   38   67    69 0.722  -2.03
 2.03 Intr +  62521  62770  250  2  1  102   76   309 0.524  26.67
 2.04 Term +  67638  67803  166  0  1   66   49   254 0.748  15.71
 2.05 PlyA +  68524  68529    6                               1.05

 3.07 PlyA -  72908  72903    6                               1.05
 3.06 Term -  88287  87971  317  1  2   68   42   191 0.883   6.62
 3.05 Intr -  89620  89508  113  0  2   11   90    59 0.113  -2.50
 3.04 Intr -  96458  96307  152  2  2   22   42   170 0.123   3.84
 3.03 Intr -  97036  96907  130  0  1   62  103    75 0.711   6.18
 3.02 Intr - 101049 100936  114  2  0   97   39    98 0.197   4.44
 3.01 Init - 110929 110874   56  1  2   74   95    48 0.319   4.91
 3.00 Prom - 113110 113071   40                              -3.45

 4.07 PlyA - 114437 114432    6                               1.05
 4.06 Term - 120962 120315  648  2  0  123   35   548 0.729  46.09
 4.05 Intr - 121353 121291   63  0  0   77   69    72 0.811   2.20
 4.04 Intr - 121531 121476   56  2  2  106   81    30 0.989   1.88
 4.03 Intr - 121714 121609  106  1  1  143   -4   141 0.590   9.27
 4.02 Intr - 123141 122851  291  0  0   13   45   290 0.224  13.61
 4.01 Init - 127403 127077  327  2  0   65   68   121 0.267   5.17
 4.00 Prom - 127457 127418   40                              -1.35

 5.00 Prom + 131319 131358   40                              -6.15
 5.01 Sngl + 131780 132301  522  1  0   42   40   266 0.471  13.00
 5.02 PlyA + 132379 132384    6                              -0.45

 6.00 Prom + 132601 132640   40                             -11.44
 6.01 Init + 132957 134362 1406  2  2   68   53   343 0.133  19.03
 6.02 Intr + 139591 139705  115  1  1   83   22    68 0.073  -0.77
 6.03 Term + 140153 140332  180  1  0   55   47   115 0.370   0.73
 6.04 PlyA + 142513 142518    6                               1.05

 7.00 Prom + 152119 152158   40                              -3.65
 7.01 Init + 152243 152366  124  1  1   78  105    59 0.696   6.98
 7.02 Intr + 152826 152855   30  1  0  105  115     1 0.523   1.68
 7.03 Term + 153992 154020   29  0  2   66   48    43 0.326  -4.64
 7.04 PlyA + 155560 155565    6                               1.05

 8.04 PlyA - 155739 155734    6                               1.05
 8.03 Term - 156353 155962  392  0  2   84   41   397 0.876  28.76
 8.02 Intr - 156805 156730   76  1  1  109   82    15 0.677   1.17
 8.01 Init - 157394 157089  306  2  0   63   30   279 0.548  16.94
 8.00 Prom - 171781 171742   40                              -5.35

 9.03 PlyA - 171929 171924    6                               1.05
 9.02 Term - 177578 177432  147  2  0  122   42   100 0.132   5.72
 9.01 Intr - 186286 186000  287  2  2   71   76   117 0.265   4.94

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:103153629_103353979|GENSCAN_predicted_peptide_1|202_aa
MFPSVIHAPLHQNHQKVLVKTADSRPILDVINQNKEGVYMTWGSGALLELQKEVTDGECA
GRDTGGRVKNCSWDPVPEPSRMKEMKSWEVSRTKGQDFISIIIIITTTKRGCRSLVVSLG
IDNHQKTWFLEGCLDLVSEVSRSEVARNRSGYTGSSKLQHSLLASIPRGYDTDISRVFTG
NNGMNCHQKLLPGPSQGKVMAY

>gi568815575r:103153629_103353979|GENSCAN_predicted_CDS_1|609_bp
atgtttccaagtgtgattcatgcaccacttcatcaaaatcatcagaaagtacttgtaaaa
actgcagattctaggcctatcctggatgtgataaaccaaaacaaggaaggtgtgtacatg
acctggggctctggggccttattggagcttcagaaagaggttactgatggtgagtgtgca
gggagggacactggaggaagagttaagaattgttcctgggacccagtccctgaaccatcc
aggatgaaggaaatgaagagctgggaggtctctcggaccaaagggcaggatttcatttct
atcatcatcattatcactaccaccaagaggggttgtagaagcctggtggtcagccttggg
attgataaccaccagaagacatggttcctggaaggctgcttggatctggttagtgaagtt
tccaggagtgaagtggccagaaataggagtggctacactggcagcagcaaacttcagcat
agcctgctggccagtattcctagaggatatgacactgacatcagcagggttttcactggc
aacaatggcatgaactgccaccagaagcttctcccaggtccttctcaaggaaaagtgatg
gcatactga

>gi568815575r:103153629_103353979|GENSCAN_predicted_peptide_2|221_aa
MQPPGPAAGPRAFLERRGARPGGSRRSWGYDPSETPAYAISASFSDTPAPHFLVQKMVVC
GAKCRGGAPRVKNPEEETARIGPGVMESKEELAANNLNGENAQQENEGGEQAPTQNEEES
RHLGGGEGQKPGGNIRRGRVRRLVPNFRWAIPNRHIEHNEARDDVESRAVNASRCCEGPH
RGQQHNTHQYPVAADECAPYYAVAADATATYEQGWIPLLPP

>gi568815575r:103153629_103353979|GENSCAN_predicted_CDS_2|666_bp
atgcagcccccgggccccgcggcgggcccgcgagccttccttgagcggagaggtgcccgg
cccggagggagccggcggtcctggggctacgacccttcggaaacacctgcctacgccatc
agcgcaagcttttccgacacccctgccccgcacttcttggtgcagaaaatggtggtctgc
ggggctaagtgtcgcggcggcgcacctcgcgtcaagaatccggaggaggagactgcaagg
ataggcccaggagtaatggagtccaaagaggaactagcggcaaacaatctcaacggggaa
aatgcccaacaagaaaacgaaggaggggagcaggcccccacgcagaatgaagaagaatcc
cgccatttgggagggggtgaaggccagaagcctggaggaaatatcaggcgggggcgagtt
aggcgacttgtccctaattttcgatgggccatacctaataggcatattgagcacaatgaa
gcgagagatgatgtagaaagccgcgctgtcaatgctagccgctgctgcgaaggcccgcac
agaggccagcaacacaacacccatcagtaccctgtcgcagcagatgagtgtgcaccctac
tatgctgtagctgcagatgctactgccacatacgaacaaggatggatcccactgctaccg
ccctag

>gi568815575r:103153629_103353979|GENSCAN_predicted_peptide_3|293_aa
MIIYAENPKEFLKESRTLRIFGFLGATQIEVREERGKSPESLQVSFCKGAIASGLFGLPE
GPRCALACLVGSARTLALCLPGAEHLMPEPAQALKHRRPQPPDIRLLGQTENVLSTTIIA
VNSIIIIIIIIIIIIKGWCSVNIQWILVGDREGQTLTFIGDAICGPSRLAKTRVTGWCAL
RHCSQRGGGVIAVKEEKGKTTFDMENSHQENEESVHNVEEELHLEEMEGQEARGNNLQEQ
APPTQEDGDGLPHRHVNNNEGRGRKRMRRRKEMGRRRKRRRKRRRRKVSRRDF

>gi568815575r:103153629_103353979|GENSCAN_predicted_CDS_3|882_bp
atgattatctatgcagaaaatcctaaagaattcttgaaagagtctagaactcttaggata
tttggttttttgggcgcgacacaaatcgaggtgagggaagagagaggaaaatcccctgaa
tccctgcaggtcagtttttgtaaaggtgcaattgcttcaggtctcttcggactcccagaa
gggcctcgatgtgccctggcctgtttggttggttctgcaaggactttagctctgtgtctt
cctggtgcagagcatctgatgcctgagccagcccaggccctgaagcacaggagaccccag
cccccagacataagactcttaggtcaaacagaaaatgtcctctctaccaccatcattgct
gtcaacagcatcatcatcatcatcatcatcatcatcatcatcatcaagggatggtgttca
gtgaatattcaatggattctggttggggacagagaagggcaaacactaaccttcatcggt
gatgccatttgtggcccctcaagattggcgaagaccagagtgacagggtggtgtgcactg
aggcactgttcacagaggggtggaggagtaattgcagtcaaagaggaaaagggaaaaaca
actttcgacatggaaaattcccaccaggaaaatgaagaaagtgttcataacgtagaggaa
gagctacatttggaagaaatggaaggccaggaagctagaggaaataatctccaggaacaa
gcaccacctacccaggaagatggagatggcttgccccataggcatgtcaataacaatgaa
gggagagggaggaagaggatgaggaggaggaaggagatggggaggaggagaaagaggagg
agaaagaggaggagaagaaaagtgtccagaagagatttttaa

>gi568815575r:103153629_103353979|GENSCAN_predicted_peptide_4|496_aa
MGTGVMTKTPKAIASRAKIDKRDLIKHRSLCMAKETINRINRQPTEWEKILANYASDKGL
ISSKYKGLKQICKRKNNPIKKWAKDMNRHFKRRHTCKLNITVESSVSIPKSLSSRYQIPV
SVEEGRLQTEGQRRQLPYSPAGRYKPGTPEVGMVMHIGYRGSDLLSRYRPVPPPFILAQK
FFCVGQEVWVPAFISLEKCRLLAEGNVFKSVVVGTNPDKKRKDLQYRCRSVGEGYCTRTL
GISGYMTAVKTLRGYGDLWLFYKSYNCMQGEKEENCPGFLQERQRREHLNMEKLYKENEG
KPENERNLESEGKPEDEGSTEDEGKSDEEEKPDMEGKTECEGKREDEGEPGDEGQLEDEG
NQEKQGKSEGEDKPQSEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKD
SQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRGVRGV
RGGGRGQKDLEDVPYV

>gi568815575r:103153629_103353979|GENSCAN_predicted_CDS_4|1491_bp
atgggcacaggtgtcatgacaaagacaccaaaagcaattgcatcaagagcaaaaattgac
aaacgagatttaattaaacataggagcttgtgtatggcaaaagaaactatcaacagaata
aacagacaacctacagaatgggagaaaatattagcaaactatgcatctgacaaaggtcta
atatcgagcaagtataagggacttaaacaaatttgcaagaggaaaaacaaccccattaaa
aagtgggcaaaggacatgaacagacacttcaaaagaagacatacatgcaagctcaatatc
actgtggaaagcagtgtgtcgattcccaagtccctctcctccaggtaccagatccctgtt
tccgtggaggaaggcagacttcagactgaaggacagagaaggcaactgccctacagccct
gcaggtcggtacaagccggggacccctgaggtagggatggtaatgcacataggctacaga
ggatcggatctgctttctagataccgccctgttccacccccattcattttggcgcagaaa
tttttttgtgttgggcaagaggtatgggtaccagcttttatttccctggagaagtgcagg
cttctggcagaaggaaatgtcttcaagtctgtggttgtgggcactaacccagacaagaaa
aggaaagacctgcagtatcggtgcaggtcagtgggagagggctactgcaccaggaccctt
gggatttcgggatacatgactgctgtcaagaccctaaggggatatggtgatctatggctg
ttttataagtcttacaactgcatgcaaggggaaaaagaagaaaactgcccaggatttctg
caggaaaggcaaagaagggaacatctcaacatggaaaagctctacaaagaaaatgaagga
aagccagagaatgaaagaaacctagaaagtgagggaaagccagaggatgagggaagtaca
gaagatgaaggaaagtcagacgaggaagaaaagccggacatggaggggaagacagaatgc
gagggaaagcgagaggatgagggagagccaggtgatgagggacaactggaagatgaggga
aaccaggaaaagcagggcaagtctgaaggtgaggacaagccacaaagtgagggcaagcca
gcctcccaggccaagccagagagccagccgcgggccgccgaaaagcgcccggctgaagat
tatgtgccccggaaagcaaaaagaaaaaccgacagggggacggacgattcccccaaggac
tctcaggaggacttacaagaaaggcatctgagcagtgaggagatgatgagagaatgtgga
gatgtgtcaagggctcaggaggagctaaggaaaaaacagaaaatgggtggttttcattgg
atgcaaagagatgtacaggatccattcgccccaaggggccaacggggtgtgaggggagtg
aggggcggaggtaggggccagaaagacttagaagatgtcccatatgtttaa

>gi568815575r:103153629_103353979|GENSCAN_predicted_peptide_5|173_aa
MKAEIKMFFETNENKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELE
KQEQTHSKASRRQEITKIRAEQKEIETQKTLQKINESRSWFFEKINKIDRPLARLMKKRE
KNQIDAIKNDKGDITTNPTEIQTTIREYYKHLYANKLENLEEMDKFLDTLSQD

>gi568815575r:103153629_103353979|GENSCAN_predicted_CDS_5|522_bp
atgaaagcagaaataaagatgttctttgaaaccaatgagaacaaagacacaacataccag
aatctctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccac
aagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaactagag
aagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaagatcagagca
gaacagaaggaaatagagacacaaaaaacccttcaaaaaatcaatgaatccaggagctgg
ttttttgaaaagatcaacaaaattgatagaccgctagcaagattaatgaagaaaagagag
aagaatcaaatagatgcaataaaaaatgataaaggggatatcaccaccaatcccacagaa
atacaaactaccatcagagaatactataaacacctctatgcaaataaactagaaaatctg
gaagaaatggataaattcctcgacacactctcccaagactaa

>gi568815575r:103153629_103353979|GENSCAN_predicted_peptide_6|566_aa
MPSLTTPIQHSVGSSGQGNQAGERNKRYSIRKEEVKLSLFADDMIVYLENPIVSAQNLLK
LISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDL
FKENYKPLLNEIKEDTNKWKNIPCSWVGRINIMKMAILPKVIYRFNAIPIKLPMTFFTEL
EKTTLKFIWNQKRARIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNKDIDQWN
RTEPSEIMSHIYNYPIFDKPDKNKKWGNNSLFNKWCWENWLAICRKLKLDPFLTPYTKIN
SRWIKDLHVRPKTIKTLEENLSNTIQDIGMGKDFMSKTPKAMATKAKIDQWDLIKLKSFC
TAKETTIRVNRQPTEWEKIFATHSSDKGLLSRIYNELKQIYKKKTDNPINKWAKDMNRHF
SKEDIYAAKRHMKKCSSSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNRWNISEDPGLAL
SCIKEASITVPSLRCAVSIIQGILSNWEDVINVMPWLYSWRKLGADKILSIKIVHNDKAI
EIPHEKLNKGVSYLFEREGKLQLRGY

>gi568815575r:103153629_103353979|GENSCAN_predicted_CDS_6|1701_bp
atgccctctctcaccactcctattcaacatagtgttggaagttctggccagggcaatcag
gcaggagaaagaaataaaaggtattcgattaggaaagaggaagtcaaattgtccctgttt
gcagatgacatgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaag
ctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagca
ttcttatacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcaca
attgcttcaaagagaataaaatacctaggaattcaacttacaagggacgtgaaggacctc
ttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaag
aacattccatgctcatgggtaggaagaatcaatatcatgaaaatggccatactgcccaag
gtaatttacagattcaatgccatccccatcaagctaccaatgactttcttcacagaattg
gaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcatcgccaagtcaatc
ctaagccaaaagaacaaagctggaggcatcacgctacctgacttcaaactatactacaag
gctacagtaaccaaaacagcatggtactggtaccaaaacaaagatatagaccaatggaac
agaacagagccctcagaaataatgtcacatatctacaactatccgatctttgacaaacct
gacaaaaacaagaaatggggaaacaattccctatttaataaatggtgctgggaaaactgg
ctagccatatgtagaaagctgaaactagatcccttccttacaccttatactaaaattaat
tcaagatggattaaagacttacatgttagacctaaaaccataaaaaccctagaagaaaac
ctaagcaataccattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaa
gcaatggcaacaaaagccaaaattgaccaatgggatctaattaaactaaagagcttctgc
acagcaaaggaaactaccatcagagtgaacaggcaacctacagaatgggagaaaattttt
gcaacccactcatctgacaaagggctactgtccagaatctacaatgaactcaaacaaatt
tacaagaaaaaaacagacaaccccatcaacaagtgggcgaaggacatgaacagacacttc
tcaaaagaagacatttatgcagccaaaagacacatgaaaaaatgctcatcatcactggcc
atcagagaaatgcaaatcaaaaccacaatgagataccatctcacaccagttagaatggca
atcattaaaaagtcaggaaacaacaggtggaatatatcagaggacccaggtttggctctg
tcctgtatcaaggaggcctccatcactgtgccaagcttgcgatgtgctgtgtccattatc
cagggcatattgagcaactgggaagatgttatcaatgtaatgccatggctgtattcctgg
agaaagctgggtgcagataagatcttgtccataaaaattgtgcacaatgacaaagctatt
gagatacctcatgagaagcttaataaaggtgtatcatatctctttgaaagggaaggcaaa
ctgcagctgagaggctactga

>gi568815575r:103153629_103353979|GENSCAN_predicted_peptide_7|60_aa
MEYYAAIKKDEFMSFAGTWMKLETIILSKLSQEQKTTWTHGDNFALHSLIDAGANTDNQE

>gi568815575r:103153629_103353979|GENSCAN_predicted_CDS_7|183_bp
atggaatactatgcagccataaaaaaggatgagttcatgtcctttgcagggacatggatg
aagctggaaaccatcattctcagcaaactatcacaagaacagaaaaccacatggacacat
ggagataactttgccctccactctctgatagatgctggtgctaacactgacaatcaagag
taa

>gi568815575r:103153629_103353979|GENSCAN_predicted_peptide_8|257_aa
MTTATRDRPTLSLTSLWRQNRRRSLPSRQWYLFPVSLRTCGPGTAPKVGSGGGAGKGPGG
GPWGWCGGAAPACGCPIPGQQRGDAAGPRCSPGAPPRDREPCVCGAKCCGDAPHVENREE
ETARIGPGVMESKEERALNNLIVENVNQENDEKDEKEQVANKGEPLALPLNVSEYCVPRG
NRRRFRVRQPILQYRWDIMHRLGEPQARMREENMERIGEEVRQLMEKLREKQLSHSLRAV
STDPPHHDHHDEFCLMP

>gi568815575r:103153629_103353979|GENSCAN_predicted_CDS_8|774_bp
atgacaacagccacacgtgatcggccaacactgagtcttacctcgttgtggcgtcagaac
cgccgtcgctcgctcccttctcggcagtggtacctgttcccggtgtccctgaggacgtgc
gggccaggtacggccccgaaagtaggaagcggagggggagcaggtaagggacccggaggg
ggtccctggggttggtgtgggggagcagccccggcctgcggatgccccatccccgggcag
cagcgcggagacgcagccggtccacgatgcagccccggggccccgccgcgggaccgcgag
ccttgtgtttgcggggccaagtgttgcggcgacgcacctcacgtcgagaatcgggaggag
gagactgcaaggataggcccaggagtaatggagtccaaagaggaacgagcgttaaacaat
ctcatcgtggaaaatgtcaaccaggaaaatgatgaaaaagatgaaaaggagcaagttgct
aataaaggggagcccttggccctacctttgaatgttagtgaatactgtgtgcctagagga
aaccgtaggcggttccgcgttaggcagcccatcctgcagtatagatgggacataatgcat
aggcttggagagccacaggcaaggatgagagaggagaatatggaaaggattggggaggag
gtgagacagctgatggaaaagctgagggaaaagcagttgagtcatagtttgcgggcagtc
agcactgatccccctcaccatgaccatcacgatgagttttgccttatgccctga

>gi568815575r:103153629_103353979|GENSCAN_predicted_peptide_9|144_aa
XLKWKLSWTLSTLSHLTCGAQSAEPFTPEFHISRALGGAYPCCSVPACQSISLGAPQPGL
GQCLRSSHLLTTLINLDQAFSTGDVCGPLEIASKLPEPTVSPADKANGLSNRQERRSRKG
DGLRSRKFRLAFAPSRLLSSEISV

>gi568815575r:103153629_103353979|GENSCAN_predicted_CDS_9|435_bp
ntgctcaagtggaagctgtcttggaccctgtctactttatcccacctgacttgcggagca
cagtctgctgagcctttcacccctgaattccacatctctagagccctaggaggtgcctat
ccttgctgcagtgttcctgcctgccagtccatctccctgggggcccctcagccaggctta
ggtcagtgtttaagaagctctcacctgctgaccacattgattaacctagatcaggcgttc
tcaactggagatgtttgtggaccacttgagattgcatcaaagttacctgaacccaccgtt
tccccagcagacaaagctaatggcctctccaataggcaggagaggcggagcagaaaagga
gatggactgcgaagccgcaaatttcgcctagcttttgccccttcccgactcctatcctca
gagatctcagtctaa