GENSCAN 1.0	Date run:  4-Nov-116	Time: 18:28:14

Sequence gi568815596r:236065917_236267971 : 202055 bp : 48.11% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  16153  16159    7  0  1   80  116     0 0.063   3.09
 1.02 Intr +  20572  20625   54  2  0  109   92    -3 0.004   1.15
 1.03 Intr +  35657  35906  250  0  1   61   21   205 0.138   7.60
 1.04 Intr +  43673  43803  131  2  2   -6   31   162 0.056   1.44
 1.05 Intr +  47775  47949  175  1  1   12   88   122 0.380   3.60
 1.06 Intr +  54276  54531  256  0  1  110   69   541 0.894  51.85
 1.07 Term +  58003  58206  204  0  0   96   55   407 0.992  35.57
 1.08 PlyA +  59075  59080    6                               1.05

 2.00 Prom +  62986  63025   40                              -6.16
 2.01 Init +  67528  67611   84  0  0   97  100    14 0.720   4.11
 2.02 Intr +  68152  68309  158  0  2   28   45   119 0.593   0.41
 2.03 Intr +  70728  70933  206  0  2   78   72    95 0.415   5.74
 2.04 Intr +  76876  77004  129  2  0   59   58    94 0.265   4.17
 2.05 Term +  78533  78618   86  0  2   63   42    93 0.433   0.02
 2.06 PlyA +  78995  79000    6                               1.05

 3.05 PlyA -  81342  81337    6                               1.05
 3.04 Term -  91164  90967  198  0  0   79   42   100 0.272   1.90
 3.03 Intr -  93806  93775   32  0  2   90   90    46 0.781   2.85
 3.02 Intr -  94280  94191   90  0  0   98    0    80 0.383   0.17
 3.01 Init -  98970  98349  622  0  1   31  105   219 0.593  13.41
 3.00 Prom -  99775  99736   40                              -6.46

 4.03 PlyA -  99910  99905    6                              -3.64
 4.02 Term - 100521  99998  524  1  2   94   55   808 0.934  72.54
 4.01 Init - 102055 101533  523  1  1   37  109   962 0.991  86.22
 4.00 Prom - 115093 115054   40                              -4.86

 5.11 PlyA - 116051 116046    6                               1.05
 5.10 Term - 129141 128956  186  0  0  102   47   164 0.900  11.19
 5.09 Intr - 129492 129282  211  2  1   59   74    86 0.174   3.22
 5.08 Intr - 144708 144582  127  1  1   72   76    57 0.131   2.64
 5.07 Intr - 145775 145571  205  2  1  102    3   162 0.246   7.87
 5.06 Intr - 148950 148446  505  2  1   91  116   788 0.999  74.88
 5.05 Intr - 172040 171773  268  0  1  146   90   449 0.864  47.49
 5.04 Intr - 175631 175364  268  2  1   52   80   293 0.481  22.01
 5.03 Intr - 191860 191779   82  0  1   64   85    65 0.115   3.44
 5.02 Intr - 196484 196433   52  0  1   77   95    51 0.608   2.67
 5.01 Init - 198429 198225  205  0  1   68   59   229 0.964  17.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 149682 149549  134  0  2   68   96    79 0.959   6.35


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:236065917_236267971|GENSCAN_predicted_peptide_1|358_aa
MKETKRNTAHLKSLDSNLIAGRRCTYSEGLHPLYGIRSGGKGPFLFPYLFMMRYVPKPIT
SAAVMVNGIHCDGGCTSRAAVGFMPRYAESRTASPRWLGLPLTGHGNVLVGSSVGVLDRQ
PWERPSRRQRRCSGPAAVETFWIRASQGQVRQSPSGSNARVSVSELADPEKSRGFTAPAT
YPVIPMSCAQCLAVPVDGFLSWPREREEKERWIRAKYEQKLFLAPLPCTELSLGQHLLRA
TADEDLRTAILLLAHGSRDEVNETCGEGDGRTALHLACRKGNVVLAQLLIWYGVDVTARD
AHGNTALAYARQASSQECIDVLLQYGCPDERFVLMATPNLSRRNNNRNNSSGRVPTII

>gi568815596r:236065917_236267971|GENSCAN_predicted_CDS_1|1077_bp
atgaaagaaactaaaagaaatactgcccatttaaagtctttggacagcaatttgattgca
gggcgtcggtgcacgtacagcgagggcttacatccactttacgggatccggagcggagga
aaagggccatttctcttcccttatctgtttatgatgcgatatgttccaaagccgatcaca
tcagccgctgttatggtgaacggaattcactgtgatggcggctgcaccagcagagccgcc
gtgggcttcatgccacgttacgcggagtctaggacggcctcaccccgctggctcgggctc
cctctcactggccatgggaatgtcctagtcggcagcagtgtcggtgttctagaccggcag
ccgtgggaacgtcctagtcggcggcagcgtcggtgctctggaccggcagccgtggaaacg
ttctggatccgagcatcccagggtcaggtgcggcaaagcccgtcaggcagcaatgctaga
gtgtctgtctccgagctggcagaccccgaaaaatccagagggttcacggctcctgcaacc
tacccagtgattcctatgtcctgtgctcagtgcctggctgtccctgtggatggcttcctg
tcatggcccagagagagggaagagaaggaacggtggatccgtgccaagtacgagcagaag
ctcttcctggccccgctgccctgcacggagctgtccctgggccagcacctgctgcgggcc
accgccgacgaggacctgcggacggccatcctgctgctggcacacggctcccgggacgag
gtgaacgagacctgcggggagggagacggccgcacggcgctgcatctggcctgccgcaag
gggaatgtggtcctggcgcagctcctgatctggtacggagtggacgtcacggcccgagat
gcccacgggaacacagctctggcctacgcccggcaggcctccagccaggagtgcatcgac
gtgctgctgcagtacggctgccccgacgagcgcttcgtgctcatggccacccctaacctg
tccaggagaaacaataaccggaacaacagcagtgggagggtgcccaccatcatctga

>gi568815596r:236065917_236267971|GENSCAN_predicted_peptide_2|220_aa
MAPRCLLPLGTPERGISSICIPVRRREKCWQGQGEANPNTLLVEAVPLQSHMELCTKTLK
SFPHDPGRQNLDHTFTTIEAYLGSHRAPHPTLATPGPARGDSEDDSAAVQWTKAWQSTPA
ASGEELRSALLSPARSEKLLSRNLSPLESTLATQSCQVESSWTDHPCGLPSGCEEELTIA
AAAAGFLCLQCPERAIPSNAMIHSTAMIHSKAMIHSKAMI

>gi568815596r:236065917_236267971|GENSCAN_predicted_CDS_2|663_bp
atggctcccaggtgcttgttacctctgggcacccccgagaggggcatctccagcatctgc
attccagtgagaagaagagagaagtgctggcaaggccaaggtgaggcgaacccaaacacg
ctgctggtggaagcagtgcccctgcaaagccatatggaattgtgcacaaagactctgaaa
agcttccctcatgacccaggaaggcagaacctggaccacaccttcaccacgatagaggct
tacctgggctcgcacagggctccccaccccaccctcgctacacccggacctgcccgtggt
gacagcgaagatgacagtgcggctgtacaatggacaaaagcctggcagtccacgccagcc
gcgagtggggaggagttacgatcagccctactgtctccagcacgttccgagaagctactc
agtcgcaatttatcaccactagagtccaccctggccacgcagagttgccaggtggaaagc
agctggacagaccatccgtgtggacttccgagtggctgcgaggaggaactcacaattgct
gctgctgctgctggctttctctgcctgcagtgtcctgagcgtgccatcccctctaacgcc
atgatccactctacagccatgatccactctaaagccatgatccactctaaagccatgatc
taa

>gi568815596r:236065917_236267971|GENSCAN_predicted_peptide_3|313_aa
MLQIDYSQGGNVFPLQISPARKEAVLACRQSGGSINQAPGVIWRQEQKPSEPSRLPGSPQ
SEAEAGWSAPGPGTSPSGRGRGGGTRAPPHPKDAPVVRTTKGENGRGYAGELGVGLQGTG
SCAPPHLGGACLVPKPTPVPTPALRSEPCPLAAGPRSAPPDTAADRPRGVQRASECERGA
TKPAARSAREAGASPASAFRVGEGGEAAHPLRAAVGYTLIPSLEQAPKDASVRPRAAPTG
SLAAFVMPACSEGEATGGELGGLWQCPWSRVGGSHTEDRGLSSGYPHTTYRQGFTTGTVG
TGTGQFFVVWDCP

>gi568815596r:236065917_236267971|GENSCAN_predicted_CDS_3|942_bp
atgctccaaatcgactacagccagggaggaaacgtctttcctttacaaatatctccggcc
cgaaaagaagcggtgctcgcctgccggcagagtggagggtccataaatcaggctccgggc
gttatctggcgacaggagcaaaaacccagcgagcccagccggcttcccggcagccctcag
tcggaggcggaggctggctggagcgcccccggccccggcacctccccctccgggcggggt
cgagggggcgggacccgggcaccgccccaccccaaggacgccccggtagtccgcaccaca
aagggggaaaacgggagaggctacgcaggggagctgggagtcggtctgcaagggacgggg
agctgcgcgcctccccatctcggtggggcgtgcctggtccccaagcccactcctgtccca
accccggccctgcgctcagagccctgtccgctcgctgccggaccccgaagcgcgccgcca
gatactgcggcggacaggcccaggggcgttcagcgggccagcgagtgtgagcgtggtgcc
accaagccagcagcccgaagcgcgagagaagccggggcttcgccagcctcagcctttcga
gtgggggaaggaggggaggccgcccacccgcttcgtgccgcggtcgggtacaccctcatc
ccctctctggaacaggcaccgaaggacgccagtgtgcggcccagagctgcacccactggg
tccctggcggcctttgtcatgccggcctgcagcgaaggagaggccaccgggggcgaactg
ggtggactgtggcagtgcccttggtcccgagtgggtggcagccatacagaggatcggggg
ctgtcctctggttacccccacaccacctacaggcagggttttaccaccgggactgtgggc
actggcacaggacaattctttgtggtgtgggactgcccatga

>gi568815596r:236065917_236267971|GENSCAN_predicted_peptide_4|348_aa
MSAAFPPSLMMMQRPLGSSTAFSIDSLIGSPPQPSPGHFVYTGYPMFMPYRPVVLPPPPP
PPPALPQAALQPALPPAHPHHQIPSLPTGFCSSLAQGMALTSTLMATLPGGFSASPQHQE
AAAARKFAPQPLPGGGNFDKAEALQADAEDGKGFLAKEGSLLAFSAAETVQASLVGAVRG
QGKDESKVEDDPKGKEESFSLESDVDYSSDDNLTGQAAHKEEDPGHALEETPPSSGAAGS
TTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRA
KWKRVKAGNANSKTGEPSRNPKIVVPIPVHVSRFAIRSQHQQLEQARP

>gi568815596r:236065917_236267971|GENSCAN_predicted_CDS_4|1047_bp
atgagcgcagcgttcccgccgtcgctgatgatgatgcagcgcccgctggggagtagcacc
gccttcagcatagactcgctgatcggcagcccgccgcagcccagccccggccatttcgtc
tacaccggctaccccatgttcatgccctaccggccggtagtgctgccgccgccgccgccg
ccgccgcccgcgctgccccaggccgcgctgcagccagcgctgccgcccgcacaccctcac
caccagatccccagcctgcccacaggcttctgctccagcctggcgcagggcatggcgctc
acctctacgctcatggccacgctccccggcggcttctccgcgtcgccccagcaccaggag
gcggcagcggcccgcaagttcgcgccgcagccgctgcccggcggcggtaacttcgacaag
gcggaggcgctgcaggctgacgcggaggacggcaaaggcttcctggccaaagagggctcg
ctgctcgccttctccgcggccgagacggtgcaggcttcgctcgtcggggctgtccgaggg
caagggaaagacgagtcaaaggtggaagacgacccgaagggcaaggaggagagcttctcg
ctggagagcgatgtggactacagctcggatgacaatctgactggccaggcagctcacaag
gaggaagacccgggccacgcgctggaggagaccccgccgagcagcggcgccgcgggcagc
accacgtctacgggcaagaaccggcggcggcggactgccttcaccagcgagcagctgctg
gagctagagaaggagttccactgcaaaaagtacctctccttgaccgagcgctcgcagatc
gcccacgccctcaaactcagcgaggtgcaggtgaaaatctggttccagaaccgacgggcc
aagtggaaacgggtgaaggcaggcaatgccaattccaagacaggggagccctcccggaac
cctaagatcgtcgtccccatccctgtccacgtcagcaggttcgctatcagaagtcagcat
cagcagctagaacaggcccggccctga

>gi568815596r:236065917_236267971|GENSCAN_predicted_peptide_5|702_aa
MSNSDYLPDYPLNSDLVKRLKSALDAKDEERVRDLICTEITPVDAVIELANDDWMKDPSA
QLPTGMLLALSGTGLGMAIRCGCCHLCVLQTGTLLLTCVHLLVNSQLGAEQEQNSSEIDG
ISMERQPGPVRGKLQIFQKTEKDPQARAGSPVQEYHTALVAGDLDHLKPLMDQFFQDANV
VFEINKDEMEWQVKSPATFGLSGLWTLEYKRELTTPLCIAAAHGHTACVRHLLGRGADPD
ASPGGRGALHEACLGGHTACVRLLLQHRADPDLLSAEGLAPLHLCRTAASLGCAQALLEH
GASVQRVGGTGRDTPLHVAAQRGLDEHARLYLGRGAHVDARNGRGETALSAACGAARRPD
EHGRCLRLCALLLRRGAEADARDEDERSPLHKACGHASHSLARLLLRHGADAGALDYGGA
SPLGRVLQTASCALQASPQRTVQALLNHGSPTVWPDAFPKGRHLIMCDIKATDAAASHKD
AGQAPHGRHGEPSVESPALSQGKPSVGSSRTVNRCKETPMERRITEAKGLLFPVVQRPAA
ARENAPAGDCKEFRLSPGRGDAMITKVVFSGREELVMTWGDEQGHPGAVGLLCKEDGAKR
NSGRPPGASEVTPVRIPSHSAGTVLWESTQAPGVEGGSHKMMHKPFYQSLFALALTPRCL
QHLCRCALRRLFGKRCFDLIPLLPLPKPLQNYLLLEPQGVLH

>gi568815596r:236065917_236267971|GENSCAN_predicted_CDS_5|2109_bp
atgtccaactcggattaccttcccgactacccactcaactcagatttagtgaagagatta
aagtctgccctggatgccaaagatgaggagagagtgagggatttaatctgcactgaaatc
acgcctgtggacgctgtgatagaactggccaatgacgactggatgaaagacccctcggct
cagctgcccaccggcatgctgctagccctatcaggtacagggttaggaatggccatccgc
tgtggctgctgccacctctgcgttctacagaccggaacactgctgctcacctgtgttcac
ttgctggtcaacagccagttaggagcagagcaggagcagaactcttctgaaatcgacggc
atctcaatggagagacagccagggccagtgagaggaaaacttcaaatatttcaaaagaca
gagaaggatcctcaagctagagcagggtccccggtgcaggagtaccacactgccctggtc
gcaggggacctcgaccatctgaagcccctcatggaccagttcttccaggatgccaacgtg
gtgtttgagatcaataaggatgagatggaatggcaggtgaaatctccagccacgtttgga
ctatcaggcctctggaccctggagtacaagcgtgagctcaccacgcccctgtgcatcgcc
gcggcccacggccacaccgcctgcgtgcgacacctgctcggccgcggcgcagacccagac
gccagccccggcggccgcggcgccctgcacgaggcctgcctcgggggccacaccgcctgc
gtccgcctgctgctgcagcaccgcgccgaccccgacctgctcagcgccgagggcctggcg
cctctgcacctctgccgcacggccgcctcgctcgggtgcgcgcaggcgctgctggagcac
ggggcctcggtgcagcgcgtgggcggcacgggccgggacacgccgctgcacgtggcggcg
cagcgcggcctggacgagcacgcgcgcctgtacctgggccgcggggcgcacgtggacgcg
aggaacggccgcggagagacggctctgagcgcggcctgcggtgcggcgcggaggcccgac
gagcacgggcgctgcctgcgcctgtgcgcgctgctgctgcggcgcggggcggaggcggac
gcgcgcgacgaggacgagcgcagcccgctgcacaaagcctgcggccacgcgagccacagc
ctggcgcgcctcctactgcggcacggcgccgacgcgggcgcgctcgactatggcggggcc
tcgccgctgggccgcgtgctccagaccgcatcctgcgctctccaggcctcaccgcagcgc
acggtgcaggcgctgctcaaccacggctctcccaccgtgtggcccgacgccttccccaag
ggacggcatctaatcatgtgcgacatcaaagcaacagacgctgcagccagccacaaagat
gctgggcaggcaccacacgggcgccatggcgagccgagcgtagagtcaccagcactgtca
cagggcaagccgtccgtgggcagcagccgtactgtgaatagatgtaaagagacacccatg
gagcgcagaattaccgaggcaaaaggccttctgtttcctgtggtgcagaggccagcagca
gcccgggaaaacgcacctgcaggtgactgtaaagagttcagactctcacctggcagagga
gatgccatgatcacaaaggtggttttctcaggaagggaagagctggtcatgacttgggga
gatgaacagggccaccccggagctgtagggctgctgtgcaaagaggatggagcaaaacgg
aattcggggagaccacctggagcatctgaagtcaccccagtcagaatcccctctcactcg
gcaggaactgtgctttgggagagcacacaagcccctggggtagagggtggttcccacaag
atgatgcacaagccgttctaccagtccctctttgccttggccctcaccccacgctgcctg
cagcatctttgccgctgtgctcttcgcagactgtttggcaaaaggtgctttgacctcatc
cccctgttacccttgccaaagcccctgcagaattacctacttttggagccacagggtgtt
ttgcactga