GENSCAN 1.0	Date run:  4-Nov-116	Time: 18:26:25

Sequence gi568815596f:44842105_45044757 : 202653 bp : 47.31% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  26858  26902   45  0  0  119   66    80 0.487   7.28
 1.02 Intr +  27549  27656  108  1  0  108   28    45 0.387   0.76
 1.03 Intr +  30509  30534   26  0  2   89  103     0 0.234  -0.66
 1.04 Term +  32617  32628   12  0  0  150   42     0 0.433  -0.20
 1.05 PlyA +  33812  33817    6                               1.05

 2.04 PlyA -  37967  37962    6                               1.05
 2.03 Term -  44963  44888   76  1  1  101   41    95 0.788   3.41
 2.02 Intr -  47121  47022  100  1  1   62   76    51 0.715   0.47
 2.01 Init -  50785  50686  100  1  1   61   80   103 0.568   7.22
 2.00 Prom -  66010  65971   40                              -4.36

 3.05 PlyA -  69938  69933    6                               1.05
 3.04 Term -  81475  81410   66  1  0  110   49    53 0.406   1.54
 3.03 Intr -  87330  87261   70  2  1   90   71    95 0.515   7.18
 3.02 Intr -  89339  89150  190  0  1   33    8   192 0.464   4.34
 3.01 Init -  91673  91667    7  2  1   61   89     0 0.436  -1.57
 3.00 Prom -  94534  94495   40                              -5.36

 4.00 Prom +  96123  96162   40                              -6.76
 4.01 Init +  98896  99019  124  0  1   58   71    87 0.601   4.57
 4.02 Intr +  99993 100806  814  1  1  140   92  1248 0.972 120.90
 4.03 Term + 102464 102656  193  2  1  108   44   315 0.963  25.99
 4.04 PlyA + 102842 102847    6                              -0.45

 5.00 Prom + 105957 105996   40                              -4.06
 5.01 Init + 106713 106873  161  2  2   79  103    24 0.583   2.31
 5.02 Term + 107710 107818  109  1  1  128   48    72 0.567   5.18
 5.03 PlyA + 108577 108582    6                               1.05

 6.05 PlyA - 109923 109918    6                               1.05
 6.04 Term - 114239 113572  668  0  2   44   53   263 0.003  12.39
 6.03 Intr - 131804 131739   66  0  0   34  113    68 0.633   2.78
 6.02 Intr - 136411 136281  131  0  2  115   60    38 0.664   4.04
 6.01 Init - 149092 148956  137  1  2   72  116    55 0.420   6.31
 6.00 Prom - 151612 151573   40                              -6.16

 7.00 Prom + 151646 151685   40                              -7.96
 7.01 Init + 151936 151999   64  0  1   54   83    77 0.515   5.11
 7.02 Intr + 154487 154739  253  0  1   11   37   251 0.522   8.79
 7.03 Term + 162509 162935  427  2  1   64   44   129 0.178   0.88
 7.04 PlyA + 163127 163132    6                               1.05

 8.03 PlyA - 163822 163817    6                               1.05
 8.02 Term - 164381 164066  316  1  1  126   42   329 0.988  26.51
 8.01 Init - 167006 166447  560  2  2   97  102  1223 0.932 119.07
 8.00 Prom - 196141 196102   40                              -2.76

 9.02 PlyA - 197717 197712    6                               1.05
 9.01 Term - 201339 201228  112  2  1   85   41   116 0.457   4.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:44842105_45044757|GENSCAN_predicted_peptide_1|63_aa
XMPVAIYIPEDFTKSSSAEVPLLKEAYPDYSSSQSPLPLLNYQNPSSHYSPSVSSLSSKM
VLW

>gi568815596f:44842105_45044757|GENSCAN_predicted_CDS_1|192_bp
nggatgcctgtggccatctatatcccggaggactttaccaaaagcagctctgctgaagtc
ccactcctcaaggaagcctacccggactattccagctcacagtcacctctccctctactg
aactatcagaacccctcgagccactactcccccagtgtttctagtctttcctctaagatg
gtactatggtga

>gi568815596f:44842105_45044757|GENSCAN_predicted_peptide_2|91_aa
MWDSLELPRDLLNGFDQNADGNMDNEVQTEVVSVPKGGSSERGKGSIQSQHLQTIRPPPC
APSTSPLTQLQIPQEEYSKKSLLIDPNWSKI

>gi568815596f:44842105_45044757|GENSCAN_predicted_CDS_2|276_bp
atgtgggacagtttggaacttcctagagacttgttgaatggctttgaccaaaatgctgat
ggtaatatggacaatgaagtccagactgaagtggtctcagtccctaaaggaggaagttca
gagaggggcaaaggttcaatccagtctcaacatttacagaccatccggccacccccttgt
gccccaagcacgtctcccctgactcaacttcagattcctcaagaagagtactccaagaag
tccctcctgattgatccaaactggtccaagatttaa

>gi568815596f:44842105_45044757|GENSCAN_predicted_peptide_3|110_aa
MPMECKSKKIHLDKEGGKKGLSGPASRMTTLQGAEEGPFCEEEINYPENATGGHVSADVV
ALETEDPAPSTPTRKQPSGLRQRPEAVAQESLETHQAEEEEGNISTQAEF

>gi568815596f:44842105_45044757|GENSCAN_predicted_CDS_3|333_bp
atgccaatggagtgtaagtccaagaagattcatttagacaaagaaggtggaaaaaaagga
ctttctgggccagcaagtcggatgaccaccctccaaggggcagaggagggcccattttgt
gaagaagaaatcaactacccggaaaacgccacaggaggacatgtttctgcagatgtagtt
gccctagaaacagaagaccccgcgccctccaccccaacacgcaaacagccctcggggctg
cgtcagcggcctgaggccgtggcccaggaaagtctggagactcaccaagctgaggaggaa
gaagggaacatctcaacccaagctgaattctga

>gi568815596f:44842105_45044757|GENSCAN_predicted_peptide_4|376_aa
MGTDGGGKSGLQHPGNWAQAPWRQIPSESGIPGWRHGPLGQGQSMVFRSPLDLYSSHFLL
PNFADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEE
LSMFQLPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARA
VVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKK
FPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKN
RRQRDRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGSAESPSTAASPTTSVSSLTERADT
GTSILSVTSSDSECDV

>gi568815596f:44842105_45044757|GENSCAN_predicted_CDS_4|1131_bp
atgggcaccgatgggggaggcaagagcggcctccagcaccctgggaattgggctcaggct
ccctggcgccagataccctcggaatccgggatccccggctggcgccacggcccgctgggc
caaggtcagtccatggtattccgctcccccctagacctctattcctcccacttcttgttg
ccaaacttcgccgattctcaccaccgctccatacttctggcgagtagcggcggcgggaac
ggtgcgggaggcggcggcggcgcgggaggcggcagcggcggcgggaacggtgcgggaggc
ggcggtgctggcggagcaggcggcggcggcggcggcggctccagggcccccccggaagag
ttgtccatgttccagctgcccaccctcaacttctcgccggagcaggtggccagcgtctgt
gagacgctggaggagacgggcgacatcgagcggctgggccgcttcctctggtcgctgccc
gtggcccccggggcgtgcgaggccatcaacaaacacgagtcgatcctgcgcgcgcgcgcc
gtggtcgccttccacacgggcaacttccgcgacctctaccacatccttgagaaccacaag
ttcaccaaggagtctcacggcaagctgcaggccatgtggctcgaggcgcactaccaggag
gccgagaagctgcgcggccgcccactcggcccggtggacaagtaccgcgtgcgcaagaag
ttcccgctgccacgcaccatctgggacggcgagcagaagacgcattgcttcaaggagcgg
actcggagcctgttgcgggagtggtacctacaggacccctaccccaaccccagcaagaaa
cgcgaactggcgcaggccaccggcctcactcccacacaagtaggcaactggtttaagaac
cggcggcagcgcgaccgcgccgcggcggccaagaacaggctccagcaccaggccattgga
ccgagcggcatgcgctcgctggccgagcccggctgccccacgcacggctcggcagagtcg
ccgtccacggcggccagcccgaccaccagcgtgtccagcctgacggagcgcgcagacacc
ggcacctccatcctctcggtaacctccagcgactcggaatgtgatgtatga

>gi568815596f:44842105_45044757|GENSCAN_predicted_peptide_5|89_aa
MQQPVGWLLCFWRSSESAPTTLHAAHFRLASQRSVLARSLPCVLRPPVYLSHLPAGAEMP
GPRDARPPGTRAEAPTASHRSGPFRPQLS

>gi568815596f:44842105_45044757|GENSCAN_predicted_CDS_5|270_bp
atgcagcagccagtaggctggctcctctgcttctggcgttccagtgagtccgcacccact
accctgcacgcagcacacttccgcctggcatcccagcggagtgttctggctcggagcctt
ccctgtgtgcttagacctcctgtgtacctcagtcacttacccgctggagctgagatgccc
ggcccgcgggacgctcgaccccctggtacgcgcgctgaggcccccacggcttcccaccgc
tccggccctttccggccccagctgagctga

>gi568815596f:44842105_45044757|GENSCAN_predicted_peptide_6|333_aa
MERREHEDREGKSRMKRNEETGQKKEKRKEKAYRKKKTEEESRGIRQTNPGPVVPRPNPK
VLLYMNKGKSLGSGVRDLSSNADSAIVIPGFLVGVTLVHQRPDLGLSSYQNGPGSRLPLA
VSKVWQRQAYGRPSASPCGEERVLAPHGFPPDSLSPWKTAPHSRCRRPRGIYLQDKKLIV
PKKGNISMRPIASPGGQPRDQVVKQEKGARKVTPNPTGQGGGSYPRKMVDFGIRQRAVPQ
EEKQAIPVEEVLRKLEQKRTARQGKAPHTTHVHYQGPRCGGFACYAPSPRGGSKNPPVAP
ERAAFRLQPAVLCARVRTASARGVRPRNRGVQG

>gi568815596f:44842105_45044757|GENSCAN_predicted_CDS_6|1002_bp
atggagagaagagaacatgaagacagagaaggaaaaagcagaatgaagagaaatgaagag
actggacaaaaaaaggaaaagagaaaagaaaaagcttacaggaaaaagaagacagaagag
gaatcaagaggtataaggcaaacaaaccctggccctgtggtccctagacccaaccccaaa
gttctcctttatatgaacaaaggaaagagcctgggatctggagtcagagatttgagttcc
aatgctgattctgccattgtaattccaggcttcctggttggtgtcaccctggttcatcag
agacctgatcttggactttccagctaccagaacgggccagggtctaggctgccattggct
gtctccaaggtgtggcagcgtcaggcatatggaaggccttcagcaagcccttgtggagag
gagagggtactagctccgcatggcttcccaccagacagcctatcaccatggaagacagcc
ccacactcccgctgtaggagacctagaggcatctatctgcaagacaagaagttaatagtg
ccgaagaagggaaatattagcatgagacctattgcaagtccaggtgggcagccacgggat
caagtagtaaagcaagagaaaggagctagaaaggtgactccaaatcccacaggccagggt
ggagggtcctacccacgcaaaatggtggactttggtataagacagcgcgcagtccctcaa
gaggagaagcaggctatcccggtggaagaggtgttgcgaaaactcgagcagaaaaggaca
gcgcggcagggcaaggccccccacaccacccacgtgcactaccaaggcccgcggtgcgga
gggttcgcatgctatgcaccatcgccgcgaggtggcagcaaaaacccgccagtggcccca
gagcgcgctgctttccgcctccaacctgcagtgctttgcgccagggtgcgcacagccagc
gcgaggggcgtccggccgcggaaccgcggggtccaaggctga

>gi568815596f:44842105_45044757|GENSCAN_predicted_peptide_7|247_aa
MELKFTEFADLLTVAQEGEDGGLFVLSLTAFKILENLVFGKGSQAKTFPEILLCLLLALF
ASGLIHRVCVTTCFIFSVVGLCYINKISTLYQAAAAVLTGPWLLPSFTANPQKQVCELEY
LCSTATRSTGTGRLELKSGGLSLGPANPRSASRPVSETATTAKEYARQETSAAQFLPQLW
HLRRHVPALGTSSLVFHFDLEVEKEAGKGCARRWCGEGSRLPLPASAASFPSQEKGGSCF
RNFSAFT

>gi568815596f:44842105_45044757|GENSCAN_predicted_CDS_7|744_bp
atggaactgaagttcacagagtttgctgacttgctcacggttgcacaggaaggtgaagat
ggaggtctcttcgtgctctccctcactgccttcaagattctggagaatcttgtgtttggc
aaaggatcccaagcaaagaccttccctgagattctcctgtgcctcctgttggctctcttt
gcatctggcctcatccaccgagtctgtgtcaccacctgcttcatcttctccgtggttggt
ctgtgctacatcaacaagatctccactctgtatcaggcagcagctgcagtcctcacagga
ccttggctcttgccaagtttcactgcaaatccacagaagcaggtttgcgagctcgaatac
ctttgctccactgccacacgcagcaccgggactgggcgtctggagcttaagtctgggggt
ctgagcctgggaccggcaaatccgcgcagcgcatcgcgcccagtctcggagactgcaacc
accgccaaggagtacgcgcggcaggaaacttctgcggcccaatttcttccccagctttgg
catctccgaaggcacgtacccgccctcggcacaagctctctcgtcttccacttcgacctc
gaggtggagaaagaggctggcaagggctgtgcgcgtcgctggtgtggggagggcagcagg
ctgcccctccccgcttctgcagcgagttttcccagccaggaaaagggagggagctgtttc
aggaatttcagtgccttcacctag

>gi568815596f:44842105_45044757|GENSCAN_predicted_peptide_8|291_aa
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLSPPPPGL
PSLHSLGHPPGPSAVPVPVPGGGGADPLQHHHGLQDSILNPMSANLVDLGS

>gi568815596f:44842105_45044757|GENSCAN_predicted_CDS_8|876_bp
atgtccatgctgcccaccttcggcttcacgcaggagcaagtggcgtgcgtgtgcgaggtg
ctgcagcagggcggcaacatcgagcggctgggccgcttcctgtggtcgctgcccgcctgc
gagcaccttcacaagaatgaaagcgtgctcaaggccaaggccgtggtggccttccaccgc
ggcaacttccgcgagctctacaagatcctggagagccaccagttctcgccgcacaaccac
gccaagctgcagcagctgtggctcaaggcacactacatcgaggcggagaagctgcgcggc
cgacccctgggcgccgtgggcaaataccgcgtgcgccgcaaattcccgctgccgcgctcc
atctgggacggcgaggagaccagctactgcttcaaggaaaagagtcgcagcgtgctgcgc
gagtggtacgcgcacaacccctacccttcaccccgcgagaagcgtgagctggcggaggcc
acgggcctcaccaccacacaggtcagcaactggttcaagaaccggcggcagcgcgaccgg
gcggccgaggccaaggaaagggagaacaacgagaactccaattctaacagccacaacccg
ctgaatggcagcggcaagtcggtgttaggcagctcggaggatgagaagactccatcgggg
acgccagaccactcatcatccagccccgcactgctcctcagcccgccgccccctgggctg
ccgtccctgcacagcctgggccaccctccgggccccagcgcagtgccagtgccggtgcca
ggcggaggtggagcggacccactgcaacaccaccatggcctgcaggactccatcctcaac
cccatgtcagccaacctcgtggacctgggctcctag

>gi568815596f:44842105_45044757|GENSCAN_predicted_peptide_9|37_aa
XFYETRGNSLLLFSVAVANSSNLLKCRLVGAVSLATD

>gi568815596f:44842105_45044757|GENSCAN_predicted_CDS_9|114_bp
nngttttatgagaccagaggtaattccctgctgctgttcagcgttgctgtggctaacagt
tccaaccttctgaagtgccggctggttggggctgtctctctggcaactgattag