GENSCAN 1.0	Date run:  4-Nov-116	Time: 18:23:37

Sequence gi568815585f:27692691_27893945 : 201255 bp : 43.52% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    850    845    6                               1.05
 1.02 Term -   4103   3715  389  0  2  -29   49   416 0.924  21.10
 1.01 Init -  10508  10484   25  2  1   78   78     7 0.467  -1.60
 1.00 Prom -  11240  11201   40                              -5.06

 2.00 Prom +  17887  17926   40                              -5.16
 2.01 Init +  23123  23266  144  1  0   39  116   110 0.387   9.02
 2.02 Intr +  46017  46077   61  2  1  115   54    97 0.094   7.31
 2.03 Intr +  51664  51816  153  2  0   73   30   118 0.075   4.54
 2.04 Intr +  54651  54776  126  1  0   50  101    38 0.101   1.95
 2.05 Intr +  57412  57459   48  2  0   70   97    62 0.036   3.95
 2.06 Term +  99200  99315  116  0  2  122   49    31 0.113   1.33
 2.07 PlyA +  99509  99514    6                               1.05

 3.00 Prom +  99757  99796   40                              -4.36
 3.01 Init + 100001 100412  412  1  1  101   94   484 0.993  46.98
 3.02 Term + 100876 101258  383  2  2   87   48   514 0.997  42.30
 3.03 PlyA + 102112 102117    6                               1.05

 4.06 PlyA - 103235 103230    6                               1.05
 4.05 Term - 106598 106518   81  2  0  134   54    49 0.431   3.79
 4.04 Intr - 115483 115397   87  1  0   50   96    36 0.034   0.77
 4.03 Intr - 116263 116162  102  1  0   24   38   118 0.016   0.77
 4.02 Intr - 124040 123916  125  0  2  103   90    34 0.337   5.40
 4.01 Init - 134102 134027   76  2  1   71   97    90 0.545   7.66
 4.00 Prom - 135523 135484   40                              -5.66

 5.03 PlyA - 135565 135560    6                               1.05
 5.02 Term - 135939 135910   30  0  0  120   49    36 0.726   0.75
 5.01 Init - 137447 137199  249  2  0   46   59   200 0.834   8.37
 5.00 Prom - 138936 138897   40                              -5.76

 6.00 Prom + 139213 139252   40                              -3.46
 6.01 Init + 141201 141259   59  2  2   75   94    65 0.262   4.69
 6.02 Intr + 148153 148243   91  1  1   96   94    35 0.284   4.90
 6.03 Intr + 153411 153465   55  2  1   69  121    11 0.079   1.05
 6.04 Term + 160005 160072   68  1  2  104   44    84 0.615   3.70
 6.05 PlyA + 161962 161967    6                               1.05

 7.02 PlyA - 161979 161974    6                               1.05
 7.01 Term - 163480 163319  162  1  0   93   33    88 0.188   1.74

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:27692691_27893945|GENSCAN_predicted_peptide_1|137_aa
MAEFSKSNGGSKISQKKVAADEEEEEDDDDEDDEETEKKSTSEEIYTRYSSQKSTEVKRE
WKRLKTINTKIKKTRILQKEKKTETPKGSSSVEDIKAKMQASVEKGGSLPKVETTFINYV
KNCFWMTDQEAIQDLWQ

>gi568815585f:27692691_27893945|GENSCAN_predicted_CDS_1|414_bp
atggcagaattttccaaaagtaatggtggtagcaagatttcacagaaaaaagttgctgct
gatgaagaagaagaagaagatgatgatgatgaagatgatgaggaaactgaaaaaaaaagc
acaagtgaagaaatctataccagatactccagccaaaaaagcacagaagtcaaacgagaa
tggaaaagactcaaaaccatcaacaccaagataaaaaagacaagaatccttcaaaaagag
aaaaaaactgaaacaccaaaaggatctagttctgtagaagatattaaagcaaaaatgcaa
gcaagtgtagaaaaaggtggttctcttcccaaagtggaaaccacgttcatcaattatgtg
aagaattgtttctggatgactgaccaggaggctattcaagatctctggcagtga

>gi568815585f:27692691_27893945|GENSCAN_predicted_peptide_2|215_aa
MHVKGAGSWKEDGGKSQAGHKECEIYCECEKKVCIQEKQGEIGVHRRKLIQHEDDENEDF
VMIFRLINEPALPNPMPSKGDDHLDKNEPFTGKDCVETKPVLPNKSKPARFRQLPMEMPR
VKLKTFAMSVTALKAARLELFLPPGGLMVSLCLRSEDADLRGLYKDKEAFTQQHLSKDAS
FTREPGPPSSDAEREAIPQVENLRPAGGRFGGARH

>gi568815585f:27692691_27893945|GENSCAN_predicted_CDS_2|648_bp
atgcatgtcaaaggagctgggagttggaaggaagatggaggcaagagtcaagcaggtcac
aaggaatgtgagatatactgtgagtgtgagaagaaagtctgcatccaagagaaacagggt
gaaattggtgtccacaggagaaagcttattcaacatgaagatgatgagaatgaggacttt
gtgatgatcttccgcttaataaatgagcctgcactcccaaatcctatgccatccaagggt
gatgaccacctggataagaatgagcccttcactggaaaggactgtgtagaaacgaagcct
gtactccccaacaagtccaaacctgccagattcaggcaactacccatggaaatgccaaga
gtgaagctaaagaccttcgccatgagtgttacagctcttaaggcagcgcgtctggagttg
ttccttcctcccggcgggctcatggtctccctgtgcttgaggagtgaagatgcagacctt
cgcggcctttataaggacaaagaagcttttacccaacaacatctgagcaaagacgcctcc
ttcacgcgggaacccggtcctccttcttccgacgcagagagagaagcgattccacaggtg
gaaaatctgagaccggctggagggaggttcgggggtgcacggcactga

>gi568815585f:27692691_27893945|GENSCAN_predicted_peptide_3|264_aa
MPRSFLVDSLVLREAGEKKAPEGSPPPLFPYAVPPPHALHGLSPGACHARKAGLLCVCPL
CVTASQLHGPPGPPALPLLKASFPPFGSQYCHAPLGRQHSAVSPGVAHGPAAAAAAAALY
QTSYPLPDPRQFHCISVDSSSNQLPSSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEI
ATYLNLSEKQVKIWFQNRRVKHKKEGKGSNHRGGGGGGAGGGGSAPQGCKCASLSSAKCS
EDDDELPMSPSSSGKDDRDLTVTP

>gi568815585f:27692691_27893945|GENSCAN_predicted_CDS_3|795_bp
atgccgcgctccttcctggtggactcgctagtgctgcgcgaggcgggcgagaagaaggcg
cccgagggcagcccgccgccgctcttcccctacgctgtgcccccgccgcacgcgctgcac
ggtctctcgcctggcgcctgccacgcgcgcaaggctgggctgctgtgcgtgtgcccgctc
tgcgtcaccgcctcgcagctgcatgggccccccgggccgcccgcgctgcctctactcaag
gcttccttcccacccttcggctcgcagtactgccacgcgcccctgggccgccagcactct
gctgtgtcgcccggggtcgctcacggcccggccgccgctgctgctgccgccgcgctctac
cagacctcctacccgctgcctgaccccaggcagttccactgcatctctgtggacagcagc
tctaaccagctgcccagcagcaagaggatgcgcacggctttcaccagcacgcagctgcta
gagctggagcgcgagttcgcttctaatatgtacctgtcccgcctacgtcgcatcgagatc
gcgacctacctgaatctgtccgagaagcaggtgaagatctggtttcagaaccgccgagtg
aagcacaagaaggagggcaagggcagcaaccatcgtggcggcggcggcgggggtgccggt
ggtggcgggagcgcaccgcaaggctgcaagtgcgcatcgctctcctcagccaagtgctcc
gaggatgacgacgaattgcccatgtctccgtcctcctcagggaaggacgaccgggatctt
acggtcactccctag

>gi568815585f:27692691_27893945|GENSCAN_predicted_peptide_4|156_aa
MAATHRQGALRLHSFKAGLLFSERLAGKRPGLGRRDELKGIFQQQSPPTFFQFSEEGMTF
MCLRVQERSQTCSQPQRGNCVLSFNAEAAITVPVSDRGADPFRLHLPPGAEVEAIFHLCA
YPSFLGAGGQGLFSEKVNDCQCSVVTVCKATCVCIK

>gi568815585f:27692691_27893945|GENSCAN_predicted_CDS_4|471_bp
atggcggccacgcacaggcagggggcgctgcgacttcacagtttcaaagccggactccta
ttcagcgaacgccttgctggaaaacgaccagggcttgggagaagagatgagctcaagggc
attttccaacaacaaagtcctccaacctttttccagttttctgaagaagggatgactttc
atgtgcttaagggtacaggagagaagccagacctgctcacagccccagagaggcaactgt
gtgctgtccttcaatgctgaagcagccatcacagttcccgtatctgacagaggagctgac
cctttcaggttacatctccctcctggtgcagaggtggaagccatcttccacctctgtgcc
tatcccagcttcctcggggcagggggacagggccttttctcagaaaaagtgaatgactgt
cagtgctcagtggttactgtttgcaaggctacttgtgtttgcatcaaatga

>gi568815585f:27692691_27893945|GENSCAN_predicted_peptide_5|92_aa
MAPSAVSPPQAPRRPLLGPWGLRAAGITETHIPVASSLSLCSEERQKGILLFPSRFLHLP
SSDKPKNLPSEKTARISRYLGVEGVFQMVQFT

>gi568815585f:27692691_27893945|GENSCAN_predicted_CDS_5|279_bp
atggcgccctctgctgttagtccgccccaggctccgcgccggcctctcctgggtccgtgg
ggcctgcgggctgcggggatcaccgagacccacattcccgtggccagcagcctttcgctc
tgctcagaggagaggcagaagggcatattgctgtttcccagtcgctttttacacctgcct
tcttcggataaacccaaaaatcttccttcagagaagacggcccgtatttcccgttatttg
ggggtggagggagtcttccagatggtgcagttcacctag

>gi568815585f:27692691_27893945|GENSCAN_predicted_peptide_6|90_aa
MRMLVLWLRLLLKVSVGRKRGPSSAAQPLNAGGPQCSVQVLSFLTLHSSWCLNARTAGIW
IQQSKFSEGLRWSLEFAFPRSSKVMLVLLV

>gi568815585f:27692691_27893945|GENSCAN_predicted_CDS_6|273_bp
atgaggatgctggtcctctggctcaggctgctcctcaaggtctcggtggggagaaagagg
ggaccttcctccgcagcccagcctctgaatgctggtggcccccagtgctcggtccaggtc
ctctccttcctcacccttcactcttcttggtgcttgaatgccaggacagcagggatttgg
attcagcagagcaagttttctgaaggtctgcgctggagcctggaatttgcatttccaaga
agctccaaggtgatgctggtgctgctggtctag

>gi568815585f:27692691_27893945|GENSCAN_predicted_peptide_7|53_aa
GSGCTELQEQYLLTLAHSLLYFSTFLLVEFAGLWTKAQGLSVYSNGGLDLMMK

>gi568815585f:27692691_27893945|GENSCAN_predicted_CDS_7|162_bp
ggatcaggctgcacagagctgcaggagcagtacctgctgacgctggctcactctctgctc
tatttttctactttcctcttagtggagttcgctggtctctggaccaaggcacaaggcctc
tctgtgtactcaaatggtggcttagatctgatgatgaaatag