GENSCAN 1.0	Date run:  4-Nov-116	Time: 18:18:09

Sequence gi568815578f:31505388_31705834 : 200447 bp : 49.28% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   9072   9347  276  2  0   63   97   426 0.840  38.71
 1.02 Intr +  22097  22195   99  1  0  115  106   137 0.920  18.51
 1.03 Intr +  32792  32874   83  1  2   95   71   106 0.899   8.04
 1.04 Intr +  37041  37196  156  0  0   98   70    43 0.809   2.63
 1.05 Intr +  39560  39648   89  2  2  134   86    65 0.993  10.51
 1.06 Intr +  42052  42305  254  2  2   68  103   111 0.502   7.75
 1.07 Intr +  43578  43727  150  2  0   81  113   108 0.128  12.96
 1.08 Intr +  43820  43945  126  1  0   63   92   207 0.999  19.48
 1.09 Intr +  44677  44734   58  0  1  146  101    98 0.999  15.36
 1.10 Intr +  48152  48169   18  0  0  102  111     1 0.566   0.38
 1.11 Intr +  49359  49442   84  1  0  104   99    91 0.977  11.59
 1.12 Intr +  54224  54260   37  0  1  113  109    92 0.998  11.12
 1.13 Intr +  56247  56349  103  0  1   88   80   200 0.991  19.38
 1.14 Intr +  60823  60908   86  0  2   76  110    73 0.857   6.92
 1.15 Term +  62691  62841  151  0  1  101   38    64 0.565   0.08
 1.16 PlyA +  66792  66797    6                               1.05

 2.02 PlyA -  68140  68135    6                               1.05
 2.01 Sngl -  73489  73064  426  1  0   81   37   296 0.959  18.10
 2.00 Prom -  77647  77608   40                              -6.76

 3.03 PlyA -  80909  80904    6                               1.05
 3.02 Term -  89548  89358  191  2  2   61   41    98 0.185   0.01
 3.01 Init -  99545  99287  259  2  1   30   94   252 0.954  17.30
 3.00 Prom -  99621  99582   40                             -10.94

 4.00 Prom +  99863  99902   40                              -5.76
 4.01 Init + 100001 100426  426  1  0   63   78   822 0.971  73.00
 4.02 Term + 101197 101277   81  0  0   93   39    75 0.788   0.79
 4.03 PlyA + 102487 102492    6                               1.05

 5.00 Prom + 104453 104492   40                              -4.26
 5.01 Init + 105294 105315   22  2  1   76  105    21 0.124   2.69
 5.02 Intr + 127822 128049  228  2  0   78   58    69 0.386   0.74
 5.03 Intr + 134546 134710  165  0  0  109   95   267 0.926  29.43
 5.04 Intr + 138017 138148  132  0  0   47  113   163 0.998  15.32
 5.05 Term + 139381 139517  137  2  2   81   38   257 0.998  18.18
 5.06 PlyA + 141214 141219    6                               1.05

 6.03 PlyA - 142312 142307    6                               1.05
 6.02 Term - 160699 160562  138  1  0  150   47   254 0.999  25.46
 6.01 Init - 191206 191135   72  1  0   72  100    15 0.175   2.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 114400 114292  109  0  1   71  103    40 0.903   4.09
S.002 Intr + 174100 174227  128  0  2   26  103   145 0.930   9.28


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:31505388_31705834|GENSCAN_predicted_peptide_1|589_aa
GNVAFPAEPVSPPASLLQQPELESDPERTLAMDSALSDPHNGSAEAGGPTNSTTRPPSTP
EGIALAYGSLLLMALLPIFFGALRSVRCARGKNASDMPETITSRDAARFPIIASCTLLGL
YLFFKIFSQEYINLLLSMYFFVLGILALSHTIRGEGHQDVACQWEAMTFTFDMSHQGPGR
ISACYKSLHSESFSKHFSRCLAGTSPFMNKFFPASFPNRQYQLLFTQGSGENKEGDSTGA
LPIPFVSLLSPASPWIMFKKFDEKESVSNCIQLKTSVIKGIKSQLVEQFPGIEPWLNQIM
PKKDPVKIVRCHEHTEILTGLTGGRGSPASGSGLTWPLCSEIINYEFDTKDLVCLGLSSI
VGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVFGTNVMVT
VAKSFEAPIKCDKTKAVVFPQDLLEKGLEANNFAMLGLGDVVIPGIFIALLLRFDISLKK
NTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFS
YESSAEILPHTPRLTHFPTVSGSPASLADSMQQKLAGPRRRRPQNPSAM

>gi568815578f:31505388_31705834|GENSCAN_predicted_CDS_1|1770_bp
gggaacgtggctttccctgcagagccggtgtctccgcctgcgtccctgctgcagcaaccg
gagctggagtcggatcccgaacgcaccctcgccatggactcggccctcagcgatccgcat
aacggcagtgccgaggcaggcggccccaccaacagcactacgcggccgccttccacgccc
gagggcatcgcgctggcctacggcagcctcctgctcatggcgctgctgcccatcttcttc
ggcgccctgcgctccgtacgctgcgcccgcggcaagaatgcttcagacatgcctgaaaca
atcaccagccgggatgccgcccgcttccccatcatcgccagctgcacactcttggggctc
tacctctttttcaaaatattctcccaggagtacatcaacctcctgctgtccatgtatttc
ttcgtgctgggaatcctggccctgtcccacaccatcaggggagaagggcaccaggatgtg
gcttgtcagtgggaagcaatgacctttacgtttgacatgagccatcaagggccaggaaga
atctctgcctgctacaaaagtctgcattcagagtcattcagcaagcattttagcagatgt
ctagcaggcaccagccccttcatgaataagttttttccagccagctttccaaatcgacag
taccagctgctcttcacacagggttctggggaaaacaaggaaggggactccaccggagcc
ttgccaattccgtttgtttccctgttgtcgcccgcttcaccctggatcatgttcaagaag
tttgatgaaaaggaaagtgtgtccaactgcatccagttgaaaacgtcagttattaagggc
attaagagccaactggtagagcaatttccaggtattgaaccatggcttaatcaaatcatg
cctaagaaagatcctgtcaaaatagtccgatgccacgaacatacagaaatccttaccggg
ctgacaggtgggaggggtagccctgcctcagggagtggacttacctggcctctctgctca
gagatcatcaattatgaatttgacaccaaggacctggtgtgcctgggcctgagcagcatc
gttggcgtctggtacctgctgaggaagcactggattgccaacaacctttttggcctggcc
ttctcccttaatggagtagagctcctgcacctcaacaatgtcagcactggctgcatcctg
ctgggcggactcttcatctacgatgtcttctgggtatttggcaccaatgtgatggtgaca
gtggccaagtccttcgaggcaccaataaaatgtgacaaaactaaggcagtggtgtttccc
caggatctgctggagaaaggcctcgaagcaaacaactttgccatgctgggacttggagat
gtcgtcattccagggatcttcattgccttgctgctgcgctttgacatcagcttgaagaag
aatacccacacctacttctacaccagctttgcagcctacatcttcggcctgggccttacc
atcttcatcatgcacatcttcaagcatgctcagcctgccctcctatacctggtccccgcc
tgcatcggttttcctgtcctggtggcgctggccaagggagaagtgacagagatgttcagc
tacgagtcctcggcggaaatcctgcctcataccccgaggctcacccacttccccacagtc
tcgggctccccagccagcctggccgactccatgcagcagaagctagctggccctcgccgc
cggcgcccgcagaatcccagcgccatgtaa

>gi568815578f:31505388_31705834|GENSCAN_predicted_peptide_2|141_aa
MGLAGPALGAAGRPAAPGSEGLSTRASSCRGCTGSPSSAGPPALRWISCRALAASPWDTA
GDLQPAMPPRPMGSCAAQASPTSAAPSSMAPGPIDPPRAEECGRHTAWDWQAAPPAAPVR
DPQGEASRAPESSGDLENLYV

>gi568815578f:31505388_31705834|GENSCAN_predicted_CDS_2|426_bp
atgggcttggcgggccccgcacttggagcggctggccggcccgccgccccaggcagtgag
gggcttagcacccgggccagcagctgcagagggtgcaccgggtccccaagcagtgctggc
ccaccggcgctgcgctggatttcttgccgggccttagctgcctccccgtgggacacggct
ggggacctgcagcccgccatgcccccccgccccatgggctcctgtgcagcccaagcctcc
cctacgagcgccgccccctcctccatggcgcccggtcccatcgaccccccaagggctgag
gagtgcggtcggcacacggcctgggattggcaggcagctccacctgcagcccctgtgcgg
gatccacagggtgaagccagccgggctcctgagtctagtggggacttggagaacctttat
gtctag

>gi568815578f:31505388_31705834|GENSCAN_predicted_peptide_3|149_aa
MREIEARTEKRLALDSPESLGFRTLLEDASRTLIYKYQDRNLKRALLYICSPGLSQFLNN
VAVRVPETRRAYPDPSRVGAINSGKSKQYTNAHTHTPNVAFICTTDTTDKPNSHTPIDTT
CQMHNAQQYTIIYNQHTDLRAHYRNTKSA

>gi568815578f:31505388_31705834|GENSCAN_predicted_CDS_3|450_bp
atgagagaaattgaggcccgaacggagaagcggctggctctggatagcccagagagcctg
ggtttccggaccctcttggaagatgcttctcggaccctgatctacaaatatcaggaccga
aatttaaagcgggcgctcctttacatctgctcccctgggctttctcaattcctaaataat
gttgctgttcgtgttcctgagacccggagggcctacccagatccctcccgggtgggagca
attaattcgggaaagtctaagcaatatacaaatgcacacacccacacgcccaacgtggca
tttatatgtacgactgacacaacagacaaacccaacagccacacaccaatagacacaacc
tgccaaatgcacaacgcacaacagtacaccataatatacaaccaacacactgacctccgc
gcacactaccgaaacaccaaatctgcataa

>gi568815578f:31505388_31705834|GENSCAN_predicted_peptide_4|168_aa
MKVASGSTATAAAGPSCALKAGKTASGAGEVVRCLSEQSVAISRCAGGAGARLPALLDEQ
QVNVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGG
RGLPVRAPLSTLNGEISALTAELVLGGELEGYIWIVALTGLNECFRCL

>gi568815578f:31505388_31705834|GENSCAN_predicted_CDS_4|507_bp
atgaaagtcgccagtggcagcaccgccaccgccgccgcgggccccagctgcgcgctgaag
gccggcaagacagcgagcggtgcgggcgaggtggtgcgctgtctgtctgagcagagcgtg
gccatctcgcgctgcgccgggggcgccggggcgcgcctgcctgccctgctggacgagcag
caggtaaacgtgctgctctacgacatgaacggctgttactcacgcctcaaggagctggtg
cccaccctgccccagaaccgcaaggtgagcaaggtggagattctccagcacgtcatcgac
tacatcagggaccttcagttggagctgaactcggaatccgaagttggaacccccgggggc
cgagggctgccggtccgggctccgctcagcaccctcaacggcgagatcagcgccctgacg
gccgagctggttctgggaggagaattggagggctacatctggattgttgctcttaccggc
ctgaatgagtgtttccggtgtctttaa

>gi568815578f:31505388_31705834|GENSCAN_predicted_peptide_5|227_aa
MAAGKKGGLSLSQSSQHVGPVTTSGLNAVSGVPSTLGPPAVPGEDPYSSALGPRVACLKG
QSVSSQVQDLERRLRSCPAGYIHPRGGGKMSPYTNCYAQRYYPMPEEPFCTELNAEEQAL
KEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTVMGCVFFFIGFAALVIWWQR
VYVFPPKPITLTDERKAQQLQRMLDMKVNPVQGLASRWDYEKKQWKK

>gi568815578f:31505388_31705834|GENSCAN_predicted_CDS_5|684_bp
atggctgccggaaagaaaggaggtctcagcctatcccagagctctcagcatgtcgggcct
gtcacgacaagtggcctgaatgccgtgtccggagtcccttccacccttggaccccccgcg
gttccaggagaagacccttattcctcggctctgggaccccgagtggcctgccttaaggga
cagtccgtctcttcccaggttcaggaccttgaaaggaggctccgcagttgtcctgcaggc
tatattcacccccgtggtggggggaagatgtccccctacaccaactgctatgcccagcgc
tactaccccatgccagaagagcccttctgcacagaactcaacgctgaggagcaggccctg
aaggagaaggagaagggaagctggacccagctgacccacgccgaaaaggtggccttgtac
cggctccagttcaatgagacctttgcggagatgaaccgtcgctccaatgagtggaagaca
gtgatgggttgtgtcttcttcttcattggattcgcagctctggtgatttggtggcagcgg
gtctacgtatttcctccaaagccgatcaccttgacggacgagcggaaagcccagcagctg
cagcgcatgctggacatgaaggtgaatcctgtgcagggcctggcctcccgctgggactat
gagaagaagcagtggaagaagtga

>gi568815578f:31505388_31705834|GENSCAN_predicted_peptide_6|69_aa
MYTVHGHMTGRPWYASSGKDSHLEDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVV
LLGSLFSRK

>gi568815578f:31505388_31705834|GENSCAN_predicted_CDS_6|210_bp
atgtatacagtgcatgggcatatgactgggagaccttggtacgccagcagtggcaaggac
agtcacctagaagatacttttgtggaactctatgggaacaatgcagcagccgagagccga
aagggccaggaacgcttcaaccgctggttcctgacgggcatgactgtggccggcgtggtt
ctgctgggctcactcttcagtcggaaatga