GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:51:56

Sequence gi568815588r:69472402_69673043 : 200642 bp : 47.80% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4450   4500   51  0  0   59   59    61 0.616   1.46
 1.02 Intr +   4606   4674   69  0  0  100   91    11 0.687   1.98
 1.03 Intr +  11290  11475  186  0  0  123   73   249 0.711  26.79
 1.04 Intr +  12740  12814   75  1  0   78   80   122 0.538  10.11
 1.05 Intr +  14222  14338  117  1  0   71   75    35 0.531   1.16
 1.06 Intr +  23193  23288   96  2  0   48  105   230 0.999  20.91
 1.07 Intr +  25879  26041  163  0  1   96   36   130 0.702   8.15
 1.08 Intr +  30147  30232   86  1  2  115   97    37 0.946   6.84
 1.09 Intr +  32037  32084   48  2  0   62   80    70 0.832   2.48
 1.10 Intr +  33723  33839  117  2  0   88   80   238 0.969  23.66
 1.11 Term +  34428  34577  150  2  0   88   49   207 0.922  14.71
 1.12 PlyA +  35239  35244    6                               1.05

 2.00 Prom +  36959  36998   40                              -7.06
 2.01 Init +  39394  39469   76  0  1   83   99    38 0.420   5.65
 2.02 Term +  66911  67191  281  0  2   15   49   643 0.980  48.71
 2.03 PlyA +  67827  67832    6                              -0.45

 3.02 PlyA -  67974  67969    6                               1.05
 3.01 Sngl -  69945  69406  540  0  0   51   42   184 0.678   6.19
 3.00 Prom -  76486  76447   40                              -3.96

 4.02 PlyA -  79794  79789    6                               1.05
 4.01 Sngl - 100642  99998  645  1  0   60   48   656 0.998  54.98
 4.00 Prom - 101915 101876   40                             -12.11

 5.06 PlyA - 102082 102077    6                               1.05
 5.05 Term - 103525 103363  163  0  1    5   42   368 0.748  21.31
 5.04 Intr - 105247 105156   92  1  2   87   93    38 0.682   2.99
 5.03 Intr - 106486 106277  210  1  0   61   28   127 0.323   3.11
 5.02 Intr - 113288 113185  104  0  2  111   91    13 0.476   3.79
 5.01 Init - 114775 114766   10  1  1   83   67     5 0.215  -1.30
 5.00 Prom - 124887 124848   40                              -3.56

 6.00 Prom + 134686 134725   40                              -3.26
 6.01 Init + 139063 139169  107  0  2   62   85    53 0.550   2.09
 6.02 Intr + 141991 142138  148  1  1   74   80    41 0.825   2.14
 6.03 Intr + 144576 144717  142  2  1   87   35    66 0.727   1.13
 6.04 Intr + 146748 146812   65  1  2   82   64    54 0.402   0.84
 6.05 Term + 148209 148316  108  2  0  147   47    25 0.840   2.81
 6.06 PlyA + 148838 148843    6                               1.05

 7.00 Prom + 153349 153388   40                              -5.06
 7.01 Init + 159343 159438   96  0  0   79   96   113 0.976  11.51
 7.02 Term + 160389 160658  270  2  0   88   43   275 0.964  18.48
 7.03 PlyA + 161174 161179    6                               1.05

 8.06 PlyA - 164218 164213    6                               1.05
 8.05 Term - 167746 167728   19  0  1   95   48    23 0.320  -3.21
 8.04 Intr - 171609 171440  170  0  2  119   97   104 0.904  13.14
 8.03 Intr - 173450 173349  102  2  0  104   86    27 0.883   4.47
 8.02 Intr - 183942 183812  131  1  2   80  100    15 0.047   2.31
 8.01 Init - 188428 188257  172  1  1  107   32    93 0.029   5.20
 8.00 Prom - 189909 189870   40                              -5.86

 9.00 Prom + 193889 193928   40                              -2.96
 9.01 Init + 194858 194988  131  1  2   86  109   104 0.944  10.05
 9.02 Intr + 197799 197901  103  0  1  123   98   -12 0.490   3.48

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  22259  22420  162  1  0  108   53    91 0.838   5.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:69472402_69673043|GENSCAN_predicted_peptide_1|385_aa
MEVQCPQNLEYRLVVLEERGVGQQEPSCPGDVGEKTVFSRLIGALVLSVGIYAEVERQKY
KTLESAFLAPAIILILLGVVMFMVSFIGVLASLRDNLYLLQAFMYILGICLIMELIGGVV
ALTFRNQQLLLRQQVLSHTLGCADLSDGPGSGPVKMFMGVPVIPAQTIDFLNDNIRRGIE
NYYDDLDFKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCSAPGPLACGVPYTCCIRNTVDT
APVGTGGLSGTPGWKRLLDPGLGACELQQSLLQNIDSMVRQTEVVNTMCGYKTIDKERFS
VQDVIYVRGCTNAVIIWFMDNYTIMAGILLGILLPQFLGVLLTLLYITRVEDIIMEHSVT
DGLLGPGAKPSVEAAGTGCCLCYPN

>gi568815588r:69472402_69673043|GENSCAN_predicted_CDS_1|1158_bp
atggaggttcagtgtccccagaacttagagtaccgcctggtggtcctggaggaaagggga
gtgggacagcaggaacccagctgccctggggatgtgggagagaagactgttttctcccga
ctgattggggccctggtcctgtctgtgggcatctatgcagaggttgagcggcagaaatat
aaaacccttgaaagtgccttcctggctccagccatcatcctcatcctcctgggcgtcgtc
atgttcatggtctccttcattggtgtgctggcgtccctccgtgacaacctgtaccttctc
caagcattcatgtacatccttgggatctgcctcatcatggagctcattggtggcgtggtg
gccttgaccttccggaaccagcagttgctcttaaggcagcaggtgctgtcccacaccctg
ggttgtgcagacctctcagatggcccaggatctggccctgtgaaaatgttcatgggagtg
cctgtgattccagcccagaccattgacttcctgaacgacaacattcgaagaggaattgag
aactactatgatgatctggacttcaaaaacatcatggactttgttcagaaaaagttcaag
tgctgtggcggggaggactaccgagattggagcaagaatcagtaccacgactgcagtgcc
cctggacccctggcctgtggggtgccctacacctgctgcatcaggaacacggtagacact
gctcctgtggggactggggggctgtcggggaccccaggatggaagaggctactggaccct
ggtcttggggcctgtgaacttcagcagagcctcttgcagaatatcgattctatggtcagg
cagacagaagttgtcaacaccatgtgtggctacaaaactatcgacaaggagcgtttcagt
gtgcaggatgtcatctacgtgcggggctgcaccaacgccgtgatcatctggttcatggac
aactacaccatcatggcgggcatcctcctgggcatcctgcttccccagttcctgggggtg
ctgctgacgctgctgtacatcacccgggtggaggacatcatcatggagcactctgtcact
gatgggctcctggggcccggtgccaagcccagcgtggaggcggcaggcacgggatgctgc
ttgtgctaccccaattag

>gi568815588r:69472402_69673043|GENSCAN_predicted_peptide_2|118_aa
MDEAGSHHSRQTDTGTENQTPHVLTRHGYTKISETTTKELIHVTKKIEEEEEEEEEEEEE
EEEERRRRRKKKKKKKEKEKEKEKKKKKKKKKKKKKKKKKKEKEKEKEKEKKTQPLQD

>gi568815588r:69472402_69673043|GENSCAN_predicted_CDS_2|357_bp
atggatgaagctggaagccatcattctcggcaaactgacacaggaacagaaaaccaaaca
ccgcatgttctcactcgtcatggctacaccaaaatctcagaaactaccactaaagaactc
attcatgtaacaaaaaaaatagaagaagaagaggaagaggaagaagaggaagaggaagag
gaagaagaagaaagaagaagaagaaggaagaagaagaagaagaagaaggagaaggagaag
gagaaggagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aaggagaaggagaaggagaaggagaaggagaagaagactcagcccctgcaggattaa

>gi568815588r:69472402_69673043|GENSCAN_predicted_peptide_3|179_aa
MWESLELPRDLLNGFDQNADSDVDNEVQAEVVSDGDEELVGNWSKGHPCYAKRLVAFSPC
PRDLWKFEYERENLGYLAEEISKHQSVQEEAEHKSLENLHPGNAIEKKNSFLRGKFKPIA
EICISNEEPNVNHQDNGENVSRECLRTSQQPLPSEAQGLRREKWFGGPVHPSCFSSTCG

>gi568815588r:69472402_69673043|GENSCAN_predicted_CDS_3|540_bp
atgtgggaaagtttggaacttcctagagacctgttgaatggctttgaccaaaatgctgat
agtgatgtggacaatgaagtccaggctgaggtggtctcagatggagatgaggaacttgtt
ggaaactggagtaaaggccacccttgctatgcaaagagactggtggcattttccccctgc
cctagagatctgtggaaatttgaatatgagagagagaatttagggtatctggcagaagaa
atttctaagcaccaaagcgttcaagaggaagcagagcataaaagtttagaaaatttgcac
cctggcaatgcgatagaaaagaaaaactcatttcttagggggaaattcaagcccattgca
gaaatttgcataagtaacgaggaaccgaatgttaatcaccaagacaatggggaaaatgtc
tccagggaatgtctgagaacttcacagcagcccctcccatcagaggcccaggggcttagg
agggaaaaatggtttgggggaccagtgcatcccagttgcttcagttccacttgtggctaa

>gi568815588r:69472402_69673043|GENSCAN_predicted_peptide_4|214_aa
MTPQPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRK
LRARRGGRSRPKSELALSKQRRSRRKKANDRERNRMHNLNSALDALRGVLPTFPDDAKLT
KIETLRFAHNYIWALTQTLRIADHSLYALEPPAPHCGELGSPGGSPGDWGSLYSPVSQAG
SLSPAASLEERPGLLGATFSACLSPGSLAFSDFL

>gi568815588r:69472402_69673043|GENSCAN_predicted_CDS_4|645_bp
atgacgcctcaaccctcgggtgcgcccactgtccaagtgacccgtgagacggagcggtcc
ttccccagagcctcggaagacgaagtgacctgccccacgtccgccccgcccagccccact
cgcacacgggggaactgcgcagaggcggaagagggaggctgccgaggggccccgaggaag
ctccgggcacggcgcgggggacgcagccggcctaagagcgagttggcactgagcaagcag
cgacggagtcggcgaaagaaggccaacgaccgcgagcgcaatcgaatgcacaacctcaac
tcggcactggacgccctgcgcggtgtcctgcccaccttcccagacgacgcgaagctcacc
aagatcgagacgctgcgcttcgcccacaactacatctgggcgctgactcaaacgctgcgc
atagcggaccacagcttgtacgcgctggagccgccggcgccgcactgcggggagctgggc
agcccaggcggttcccccggggactgggggtccctctactccccagtctcccaggctggc
agcctgagtcccgccgcgtcgctggaggagcgacccgggctgctgggggccaccttttcc
gcctgcttgagcccaggcagtctggctttctcagattttctgtga

>gi568815588r:69472402_69673043|GENSCAN_predicted_peptide_5|192_aa
MAEGHKEWTIKDKLKNKFKDEFDIVSLPCTLGSHPQPQVDANSWESQEDGRVFTIREFKS
PGVRRCPASTPRLSNPLRSVQRPLSQPPFGKPRSSSAALRSPGCQHCELAQQPLGGELRA
GQHQPAEALQLLADEIWVWQGWPMRQTSVKKEKEEEKEKEKEEEGGEEEEEEEEEEEEEE
EEEEEAAAAAAA

>gi568815588r:69472402_69673043|GENSCAN_predicted_CDS_5|579_bp
atggcagaagggcataaagaatggaccattaaggacaaactaaaaaacaaattcaaggat
gaatttgatatagtctccctgccttgcactttaggttctcacccccaaccccaggtggac
gccaactcctgggaatcccaggaggacgggagagtcttcaccatccgagagttcaagagc
ccaggggtcaggcgatgcccagcgagcacccccagactttccaaccctctccgctccgtc
cagcggcccctgtcccagccgccttttggcaagccgcgctcttcctccgctgccctgcgc
tctcctggctgccagcactgtgagctggcgcagcagccgttgggtggggagctgcgcgct
gggcagcaccagcctgcggaagcgctccagctcctggcagatgaaatatgggtctggcaa
ggctggcctatgaggcagacaagtgtgaagaaggagaaggaggaggagaaggagaaggag
aaagaagaagaaggaggagaagaagaagaagaagaagaagaggaggaggaggaggaggag
gaggaggaggaggaagcagcagcagcagcagcagcttga

>gi568815588r:69472402_69673043|GENSCAN_predicted_peptide_6|189_aa
MRYCYTSIRMVKIQKTDNSKYWQGRIGTTGILIHHWTLVTVDYNCQSYKTQALFKKEFLG
KSKDNRGGGKSNKDTTGNGSLWRLQGSCNADSLRLFECELDTSNSHIYILQMLRNMCQTL
YVVFLKLFNLAGVPAGSKTSMASYGLQCKSQTKNTIGPSTIEISVPNLSQTLNICSTLKG
TMKQASRLN

>gi568815588r:69472402_69673043|GENSCAN_predicted_CDS_6|570_bp
atgagatactgctatacatctattagaatggtcaaaatccagaaaactgacaactctaaa
tactggcaaggaagaattggaacaacagggattctcattcatcactggactctagtaaca
gtggattataactgccagagttataagacacaggctctatttaagaaggagttcttaggg
aaatccaaagataacaggggagggggaaaatccaacaaagacactacaggaaatggaagc
ttatggcgcctacagggcagctgcaatgcagactctcttagacttttcgaatgtgaattg
gacacatccaattcacacatctacatccttcaaatgctaaggaacatgtgtcaaactctc
tatgtggttttcctgaaactctttaatttggctggagtacctgcaggctccaaaacttcc
atggcttcctatggcctacagtgcaagtcacagactaagaataccataggtcccagcacc
attgaaatttcagtcccaaacctcagccagaccctgaacatatgttccaccctgaaagga
acaatgaagcaagcctccaggcttaattaa

>gi568815588r:69472402_69673043|GENSCAN_predicted_peptide_7|121_aa
MVRILANGEIVQDDDPRVRTTTQPPRGSIPRQSFFNRGHGAPPGGPGPRQQQAGARLGAA
QSPFNDLNRQLVNMGFPQWHLGNHAVEPVTSILLLFLLMMLGVRGLLLVGLVYLVSHLSQ
R

>gi568815588r:69472402_69673043|GENSCAN_predicted_CDS_7|366_bp
atggtgcggatcttggccaatggggaaatcgtgcaggatgacgacccccgagtgaggacc
actacccagccaccaagaggtagcattcctcgacagagcttcttcaacaggggccatggt
gctcccccagggggtcctggcccccgccagcagcaggcaggtgccaggctgggtgctgct
cagtcccccttcaatgacctcaaccggcagctggtgaacatgggctttccgcagtggcat
cttggcaaccatgctgtggagccggtgacctccatcctgctcctcttcctgctcatgatg
cttggtgttcgtggcctcctcctggttggccttgtctacctggtgtcccacctgagtcag
cggtga

>gi568815588r:69472402_69673043|GENSCAN_predicted_peptide_8|197_aa
MEHHDCRCKGLPHMLVAQKQQLTVKDGNTLCSRWIKWLQRQAKDPAFSPSQESRVEKGRV
VEGSDHRVHEARLPGNHSRSRGVDSAPPTLAHAGLLLTEEKTLKENGRRAEALRVGVHWR
HGTSQGPGRTLWAEKVKPHFRTRGQVYDASSAPVTEHTATELPAGNQGSQPGLQEGGLEG
TVVTLVSWKVTSEKDKS

>gi568815588r:69472402_69673043|GENSCAN_predicted_CDS_8|594_bp
atggagcaccatgactgcagatgtaagggtctcccacacatgctggtggctcagaagcaa
cagctgacagtaaaagatggaaacaccctttgcagccgctggatcaaatggcttcagcgc
caggccaaagatccagcttttagcccaagccaggaaagcagagtagagaaggggagagtt
gttgaggggtcagaccatcgggttcacgaggccaggcttcctggcaaccactcccggagc
aggggagtggattctgctccaccaaccctggctcacgctggcctgctcttgacggaagag
aagacccttaaggaaaatggccgccgagcagaagctctgagggttggcgtgcattggcgg
catggaacaagtcaggggcctggaaggacactgtgggcagaaaaggtgaagccccacttc
aggacaaggggccaagtgtacgatgcttcctcagcacctgtgactgagcacacggctact
gagctgcctgctggcaatcaagggagccagccagggctgcaggaggggggtctagagggg
actgtggtcaccctggtgtcctggaaagtcactagtgaaaaagacaagagctag

>gi568815588r:69472402_69673043|GENSCAN_predicted_peptide_9|78_aa
MPGTTRLWLLCPCGWDAVVGPELDEMPSWDSIRWLVTFPAEGIRYQRGPPESSICDSPPL
SYSLTKHLALLLQSTHPK

>gi568815588r:69472402_69673043|GENSCAN_predicted_CDS_9|234_bp
atgccgggcaccaccaggctctggctgctgtgtccatgtggttgggatgctgtggtgggc
ccagagctggatgagatgccgagctgggactctatcaggtggctggtcaccttccctgct
gagggcatcaggtatcaaagaggccctccagaatcctcaatctgtgatagtcccccactc
agttattctctcacaaagcatctggctcttctccttcagagcactcatcccaag