GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:49:34

Sequence gi568815591r:31238258_31439268 : 201011 bp : 38.97% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  11762  11875  114  1  0  104   84    51 0.643   6.02
 1.02 Intr +  13350  13476  127  2  1  -12   90   111 0.201   0.63
 1.03 Intr +  24226  24363  138  2  0   45   91    82 0.270   3.71
 1.04 Intr +  42562  43010  449  2  2   67   86   234 0.019  13.24
 1.05 Intr +  53044  53119   76  0  1   18   84    76 0.012  -1.63
 1.06 Intr +  58477  58573   97  2  1   38   78    90 0.033   1.15
 1.07 Intr +  67552  67726  175  1  1   55   70   100 0.041   3.92
 1.08 Intr +  79777  79900  124  0  1   15  101    41 0.013  -2.66
 1.09 Intr +  85407  85704  298  1  1  122   31   160 0.172   8.71
 1.10 Intr +  95365  95447   83  1  2   44   98    44 0.023  -0.64
 1.11 Term +  98368  98684  317  2  2   79   54   165 0.247   6.32
 1.12 PlyA +  99457  99462    6                               1.05

 2.02 PlyA -  99691  99686    6                               1.05
 2.01 Sngl - 101011  99998 1014  1  0   55   39   648 0.953  53.36
 2.00 Prom - 101243 101204   40                              -6.05

 3.00 Prom + 101710 101749   40                              -7.25
 3.01 Init + 117870 117929   60  2  0   62  100    37 0.509   3.60
 3.02 Intr + 119464 119597  134  0  2   69   51    99 0.378   2.82
 3.03 Intr + 119688 119781   94  0  1   26   61   127 0.426   2.85
 3.04 Term + 130526 130900  375  1  0   51   43   341 0.541  19.65
 3.05 PlyA + 130970 130975    6                               1.05

 4.06 PlyA - 131006 131001    6                               1.05
 4.05 Term - 133089 132900  190  2  1   75   49    80 0.537  -1.26
 4.04 Intr - 133770 133549  222  2  0   49   93   101 0.705   3.02
 4.03 Intr - 134770 134333  438  0  0   55   70   372 0.547  23.80
 4.02 Intr - 134968 134836  133  2  1   13   47    72 0.689  -5.62
 4.01 Init - 135914 135617  298  2  1   68   82   198 0.806  14.66
 4.00 Prom - 153860 153821   40                              -5.25

 5.06 PlyA - 154082 154077    6                               1.05
 5.05 Term - 167962 167812  151  0  1   92   49   178 0.933  10.70
 5.04 Intr - 175658 175559  100  0  1  -20   75   111 0.020  -2.75
 5.03 Intr - 182161 182031  131  0  2   22   88   300 0.984  22.82
 5.02 Intr - 184840 184714  127  2  1   31   95    65 0.132   0.32
 5.01 Init - 192657 192450  208  0  1   57   53   144 0.432   6.83

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  42333  43010  678  2  0   42   86   299 0.821  20.28


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:31238258_31439268|GENSCAN_predicted_peptide_1|665_aa
THSALFMETTMLVAHSLSLAQVFSEELQSLDVDRFEVGKETHRLQELRRLLKLPPGGGLR
EVEADVPREELSVDFVQVPQGISHMEKDVREGQSNWRYKWLGYGAVKHHNGSNTNSVLQL
LQLALAVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISN
FSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIHLTRDVKYLLKEN
YKSPLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKTLELLQPSVNKTSGGKGGACRFPL
TECGRKEQEPEHNGCKGKINAGQTKGTIVYEIQRKSETVQRHTIPLGRVNTKLAPPDQSL
VLCAALSTESCNANAILTPWNQIQGLVYGGVLARLNTQWAYDHIARIWNISAKTPFLDEG
ILLQERDSDTKQNGPALILSPSMPLSPQLQLRSLFNFRHRQLPFNRLVHNSVRTFHKRLS
LDKFKTEGLIAVPPQPARSRSHRTFHKGLSLNKFKTEGLITVPPRPARSRSHIEPEIGDE
SQREQFQSGVQMPKKMIEVKGQVSVGAAARVRRAQSPGPQGAHCGRDTGSAACARAATEA
TQRRQQPLPAPPARPRRACAGSGGAHKVPEGQRWPGLPKTCPVPPPLHPLSAALIGLRSC
PRSSP

>gi568815591r:31238258_31439268|GENSCAN_predicted_CDS_1|1998_bp
acccatagtgctttatttatggagactactatgctggtagcccacagcctaagtcttgct
caggtgttttctgaagagttgcagtctctggatgtagataggtttgaggtggggaaagag
acccatcggttgcaggagctgaggcgattgcttaaactgccacctggaggaggattgaga
gaggtagaggctgatgttcccagagaagaactttctgtggattttgtccaagtgccccag
ggaattagtcatatggagaaagatgtacgtgaaggacagtccaattggagatacaagtgg
ttgggatatggagctgtgaaacatcataatggctcaaatacaaatagtgtattacaatta
ttacaactagcacttgcagtgttggaagttctggccagggcaatcaggcaggagaaggaa
ataaagggtattcaattaggaaaagaagaagtcaaattgtccctgtttgcagacgacatg
attgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagcaac
ttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacacc
aataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaag
agaataaaatacctaggaatccaccttacaagggacgtgaagtacctcctcaaggagaac
tacaaatcaccgctcaatgaaataaaagaggatacaaacaaatggaagaacattccatgc
tcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaagactttagaacta
ttacagccctctgtaaataagacttcaggtggaaaaggtggagcatgccggtttcctcta
actgaatgtggaagaaaagaacaagaaccagaacataatgggtgcaaaggtaagataaat
gcaggacagacaaaaggaaccattgtttatgaaatccagaggaaatcagaaacagtccaa
aggcacactattcccttaggaagagtcaacacaaaattagcaccaccagaccaaagtcta
gtgctttgtgctgccttaagcacagaatcctgcaatgcaaatgccattttaactccttgg
aatcaaattcagggcctggtgtatggaggtgttctggctaggttgaacactcaatgggct
tatgatcacatagccagaatctggaatattagtgcaaaaacaccattcttggacgaagga
atattactccaagagagggatagtgacactaagcagaatggccctgcactgattttgagc
ccatccatgcccctaagtccacaactgcagctcagatctctcttcaacttcagacataga
cagctgccattcaaccgcctagtacataactcagtcaggactttccacaagagacttagt
ctcgacaagttcaaaactgagggtctcatcgctgtcccaccccagcctgcccgatcgagg
tcacacaggactttccacaagggacttagtctcaacaagttcaaaactgagggtctcatc
accgtcccaccccgacctgcccgatctaggtcacacatagaaccagagataggtgatgag
agccagagagagcagtttcaaagtggggtacaaatgcccaaaaagatgattgaggttaaa
ggccaggtcagtgtgggcgccgcggcccgggttcgcagggcgcagtcccccggcccccag
ggcgcccactgcgggcgggacacgggcagtgcagcctgtgcccgggcggccaccgaggcg
acgcaacgccgccagcaacctctccccgcgccgcccgccaggccccgtcgggcctgcgcc
ggctctggcggtgcccacaaagtccccgaggggcagcgttggccaggcctacccaagacc
tgccccgtcccgccaccactgcacccactttctgctgccctcatcggtctgcgcagctgt
ccccgctcctccccctga

>gi568815591r:31238258_31439268|GENSCAN_predicted_peptide_2|337_aa
MLTLPFDESVVMPESQMCRKFSRECEDQKQIKKPESFSKQIVLRGKSIKRAPGEETEKEE
EEEDREEEDENGLPRRRGLRKKKTTKLRLERVKFRRQEANARERNRMHGLNDALDNLRKV
VPCYSKTQKLSKIETLRLAKNYIWALSEILRIGKRPDLLTFVQNLCKGLSQPTTNLVAGC
LQLNARSFLMGQGGEAAHHTRSPYSTFYPPYHSPELTTPPGHGTLDNSKSMKPYNYCSAY
ESFYESTSPECASPQFEGPLSPPPINYNGIFSLKQEETLDYGKNYNYGMHYCAVPPRGPL
GQGAMFRLPTDSHFPYDLHLRSQSLTMQDELNAVFHN

>gi568815591r:31238258_31439268|GENSCAN_predicted_CDS_2|1014_bp
atgttaacactaccgtttgatgagtctgttgtaatgccagaatcccagatgtgcagaaag
ttttctagagaatgcgaggaccagaagcaaattaagaagccagaaagcttttccaaacag
attgtccttcgaggaaagagcatcaaaagggcccctggagaagaaaccgagaaagaagaa
gaggaggaagacagggaagaggaagatgaaaatgggttgcctagaaggaggggtcttagg
aaaaaaaagacaacaaagctgcgattggaaagggtcaagttcaggagacaggaagcgaac
gcgcgcgagaggaacaggatgcacggcctcaacgacgctctggacaacttaagaaaagtg
gtcccctgttattctaaaacccagaaactgtccaaaatagagactttacgactggccaaa
aactacatctgggcactttctgaaattctgagaatcggcaagagaccagatctgctcaca
ttcgtccaaaacttatgcaaaggtctttcccagccaactacaaacttggtggcaggctgc
ttgcagctcaacgccaggagtttcctgatgggtcagggtggggaggctgcacaccacaca
aggtcaccctactctaccttctacccaccctaccacagccctgagctcaccactccccca
gggcatgggactcttgataattccaagtccatgaaaccctacaattattgcagtgcgtat
gaatccttctatgaaagtacttcccctgagtgtgccagccctcagtttgaaggtccctta
agtcctcccccaattaactataatgggatattttccctgaagcaagaagaaaccttggac
tatggtaaaaattacaattacggcatgcattactgtgcagtgccacccaggggtcccctt
gggcagggtgccatgttcaggttgcccaccgacagccacttcccttacgacttacatctg
cgcagccaatctctcacaatgcaagatgaattaaatgcagtttttcataattaa

>gi568815591r:31238258_31439268|GENSCAN_predicted_peptide_3|220_aa
MSNDCIAKVASLINTRVSLKTMQIPTLVQPWKPSCLECSNQVTEEYDTLPKRYQVEDPIG
RGQQQLTRDETKLRAVVKLLQVDHDGACRATMEMKQGAGERMKRELECTSTGIGQPLQCQ
WDQTPLTQTYCVPPTVGGSAQVSGCRSWSKCFWVLAGANYMQALPQRQGRVSATLEAPEG
MLQCPFSSVIRGRLKYEQSVSPLPFHMRQLPSAIEGKGPV

>gi568815591r:31238258_31439268|GENSCAN_predicted_CDS_3|663_bp
atgagcaatgattgcattgcaaaagtggcctctctcattaatacccgagtcagtctgaag
acaatgcagatccccaccttggttcagccctggaaaccctcttgcctggagtgcagtaac
caagttacagaggaatatgacacattgccaaagaggtatcaagttgaagatcctataggg
cgtggtcagcaacagcttaccagagatgaaacaaagttgagggcagtcgtgaagttattg
caggtggaccatgatggtgcctgcagggccacgatggagatgaagcaaggagcaggtgag
cgaatgaagcgggaactggagtgcacaagcactggaattggccagccacttcagtgccag
tgggatcaaactccactcactcagacctactgcgttccacccaccgtgggagggagtgca
caggtgagtggatgcaggagctggagcaagtgcttttgggtgctggcaggagcaaattac
atgcaggccctgccgcagcgtcaaggcagggtgtctgcgactctggaagccccagagggc
atgttacagtgcccttttagctctgtcatccgtggacggcttaagtatgaacagtcagtg
agccctctgccctttcacatgaggcagctgccctctgccattgagggcaaagggccagtg
tag

>gi568815591r:31238258_31439268|GENSCAN_predicted_peptide_4|426_aa
MVAPVLASQPFDSHLFSVTACLVSDSPTLSVYHVSPLSVLGTSPLCGKMHHPQRQPLLHM
GQELADKWPSLPEALYPAEEVSLGSSLCRAQQPLRDIPEVREIPVYLMEHQQGAGNRSTS
KQRSDNRALAEDQTALCWGILPPGNLCSPQAFIQEMFDGCLCLRHAHTFQPPRCQPYAPN
EQPVFIITGSLYRACPVANCVTLSSKKLGYVESLFWAGWIKSYRRLCSVEETDGTDGDAV
AEHKPKRRANGCWTSRTGCRSEKEAEFGFTHLFSQLVNPPSSPLPASYLRTLQTDFTMHC
YHPGHIYCLIFNWGDLSKPLRINGCKLVELKGLWRKPFANNRETMALQAGPPEGKYTFGG
LVACVVQSFQLSVPTMPIPTKIKMGDNLFTKAEKCYRIFYRHSADHQTEELNAQAEIFGR
KKYIFL

>gi568815591r:31238258_31439268|GENSCAN_predicted_CDS_4|1281_bp
atggtggccccggtgcttgcatcacagcccttcgactcacatctgttttcagtgacagct
tgtctggtttcagattcacccaccttaagtgtgtaccatgtgtctccactttctgttctg
gggacttctccactctgtggtaaaatgcatcatcctcagaggcagcccttactccatatg
ggacaggagctggcagacaaatggcccagcctcccggaggcactctaccctgctgaggag
gtctccctgggctcgagcctctgccgtgctcagcagcccctccgtgacatacccgaagtg
agggagatccctgtctacctgatggagcatcagcaaggggcagggaacaggtctacatca
aaacagcgttcagacaatagggcattagctgaggaccaaactgccttgtgttggggcatc
ctcccaccaggaaacctttgcagcccacaagcattcattcaagagatgtttgatgggtgt
ctttgtcttcgacatgctcacacctttcagcccccacgatgtcaaccatatgctcctaat
gagcaacccgtgtttattataacagggtctctttatcgtgcatgccctgtagccaactgt
gtcacactctcttctaagaagcttgggtatgtggagtcattgttctgggcaggctggatc
aagagctaccggaggttgtgcagtgtcgaggaaacagatggaacagatggggacgctgtg
gcagagcacaaacccaagagaagagccaacgggtgctggaccagccgcacagggtgtagg
agtgagaaggaggcagaatttggctttactcatcttttttcccagctggtgaatccacct
tcttctcctttacctgcttcctacctaaggacacttcaaacagacttcacaatgcactgt
taccatccgggccatatttattgtttaatatttaactggggagatttgtcaaaaccctta
agaattaatggttgcaaacttgtggagttaaaaggcttgtggaggaaaccatttgctaac
aacagggagacaatggccctgcaggctgggccaccagaaggcaaatacacatttgggggt
ctagtggcctgtgtggtccaatcatttcagttaagtgtcccaactatgccgattcctacg
aaaataaaaatgggtgataatctgttcactaaagccgagaaatgttatagaatattttac
agacatagtgccgaccaccagactgaggaattgaatgcccaggctgaaattttcggcagg
aaaaaatatattttcctgtga

>gi568815591r:31238258_31439268|GENSCAN_predicted_peptide_5|238_aa
MPVVHIQNSLNIVQDSCCFSVYKYKKVIDPHELVGQDPEQWSRGEPENFSPLLQENKKNM
KAGRMVDREEGDAEDEQVPGLQPKFLAARHSSGHLLTHIQLLSPAQVHIFPRWNDDDDDD
DDDDDDDDEMTIIMMKEKDQRKENRNESVPSNGKGGTYAGNLQAMPWDCVVERSHGTAVN
TAGQNNMDSLPTFISGLEIPENSKVAKGVEEEVMVAQCILGNVPPHKVFSQRHKQEEL

>gi568815591r:31238258_31439268|GENSCAN_predicted_CDS_5|717_bp
atgcctgtagtacacattcagaattcactaaatattgtgcaggacagctgctgcttttca
gtctacaagtataaaaaagtgattgacccacatgagcttgtgggccaggaccctgaacag
tggagccgtggtgagcctgaaaacttctctccacttctccaggagaataagaagaatatg
aaagcagggaggatggtggacagggaggagggtgatgcagaggacgaacaggtgccaggt
ctccaacccaagttcctggctgccaggcacagctcgggccatctactcacacacatacag
ctcctctccccagctcaggtccacatattcccaagatggaatgatgatgatgacgatgat
gatgatgatgatgatgatgatgatgagatgacaatcattatgatgaaagagaaggaccaa
aggaaagaaaacaggaatgagagtgttcctagtaatggaaaaggagggacctatgctggc
aatcttcaggcaatgccctgggactgtgttgtggagagaagccatggaacagctgtgaac
actgccgggcagaataacatggacagtcttcccacattcatatcgggactggaaattcca
gaaaacagtaaggtagcaaaaggagttgaggaagaagtgatggtggcccagtgcattcta
ggaaatgtccctccacacaaagtattcagccagaggcacaaacaagaagaactttag