GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:31:10

Sequence gi568815579f:33279240_33479689 : 200450 bp : 50.45% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -    869    690  180  0  0   62   61   147 0.306   9.24
 1.05 Intr -   3080   2938  143  1  2   97   36    49 0.185   0.60
 1.04 Intr -   5613   5591   23  0  2   77   75    48 0.143  -1.26
 1.03 Intr -  13989  13804  186  0  0   30  113   130 0.271   9.59
 1.02 Intr -  18442  18349   94  0  1   18   81    93 0.104   1.57
 1.01 Init -  23175  22103 1073  0  2   78   49  2271 0.131 216.04
 1.00 Prom -  51275  51236   40                              -4.26

 2.06 PlyA -  52103  52098    6                               1.05
 2.05 Term -  62267  62125  143  0  2   63   44   138 0.118   4.99
 2.04 Intr -  71560  71500   61  1  1   87   42    71 0.006   0.71
 2.03 Intr -  81856  81306  551  2  2   25   85   572 0.099  43.19
 2.02 Intr -  82057  81979   79  1  1   42   57   105 0.840   1.92
 2.01 Init -  82207  82067  141  1  0  114   -5   215 0.843  15.01
 2.00 Prom -  87299  87260   40                              -1.96

 3.00 Prom +  91377  91416   40                              -1.46
 3.01 Init +  94456  94538   83  0  2  102  -29   174 0.242   5.54
 3.02 Intr +  98992  99019   28  1  1   92   78    17 0.095  -0.78
 3.03 Term +  99905 100453  549  1  0   71   41   388 0.215  26.70
 3.04 PlyA + 100734 100739    6                               1.05

 4.18 PlyA - 101202 101197    6                               1.05
 4.17 Term - 108242 108105  138  2  0   68   43   275 0.808  18.96
 4.16 Intr - 108842 108651  192  2  0  133   84   389 0.986  42.69
 4.15 Intr - 110074 109974  101  2  2   69   76     5 0.291  -2.77
 4.14 Intr - 111516 111432   85  0  1   86  110    25 0.633   3.89
 4.13 Intr - 112240 112056  185  2  2  108   78   308 0.843  31.31
 4.12 Intr - 122630 122482  149  1  2  118   99   276 0.951  31.58
 4.11 Intr - 126726 126524  203  0  2   33   60   140 0.301   3.78
 4.10 Intr - 129152 129029  124  1  1   95   59    97 0.802   8.09
 4.09 Intr - 131952 131827  126  2  0   40   33   108 0.359   0.29
 4.08 Intr - 132510 132433   78  2  0   96  103   107 0.874  11.67
 4.07 Intr - 134404 134336   69  0  0  113  115   151 0.965  18.60
 4.06 Intr - 136549 136492   58  2  1   61   67    80 0.460   1.14
 4.05 Intr - 136963 136776  188  0  2   79   32    93 0.458   2.13
 4.04 Intr - 139834 139706  129  0  0   55   16   107 0.147   0.01
 4.03 Intr - 144160 144000  161  1  2   68   59    63 0.002   0.19
 4.02 Intr - 148358 148243  116  0  2    7   84    93 0.010   0.97
 4.01 Init - 157146 157083   64  0  1   59  105    92 0.575   7.31
 4.00 Prom - 160605 160566   40                              -4.26

 5.11 PlyA - 161468 161463    6                               1.05
 5.10 Term - 162201 162106   96  0  0   73   44   125 0.862   4.57
 5.09 Intr - 168045 167943  103  2  1   95   97    64 0.800   8.18
 5.08 Intr - 168860 168770   91  0  1   77   76    54 0.864   2.15
 5.07 Intr - 168950 168881   70  2  1   52   78   110 0.934   5.15
 5.06 Intr - 182201 182093  109  1  1   84   95    22 0.038   2.79
 5.05 Intr - 183802 183756   47  1  2   87  121    56 0.976   6.01
 5.04 Intr - 184823 184748   76  1  1   47  107   103 0.178   7.62
 5.03 Intr - 189491 189228  264  1  0   64   80   118 0.048   5.23
 5.02 Intr - 198032 197841  192  1  0   55   43   135 0.196   4.31
 5.01 Intr - 199397 199355   43  0  1  114   89    34 0.762   3.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  23175  22099 1077  0  0   78   54  2285 0.851 221.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815579f:33279240_33479689|GENSCAN_predicted_peptide_1|567_aa
MESADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEPLGGICEHET
SIDISAYIDPAAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVM
PGGAHGPPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFP
YQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPA
LGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKSR
DKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCAAV
TDITVISWISWESVNVGFGPDTCDEPLGLPRRPQDKGFIPEQSEGTVVCHAEIYASFSIT
SATCLEPGPLGMELKATEPWLTVGLQSRTGHLSALDVSRPPSPNFPNLGCQSHGRTQSKW
VWEDSGVTGQHSPQGPAGGCLTAAETDISGSAQRGRQQVDTATVNRTPRQPTPLEPSLWL
PHLPVLQLPETLPQVVCCSNSGSTGLX

>gi568815579f:33279240_33479689|GENSCAN_predicted_CDS_1|1701_bp
atggagtcggccgacttctacgaggcggagccgcggcccccgatgagcagccacctgcag
agccccccgcacgcgcccagcagcgccgccttcggctttccccggggcgcgggccccgcg
cagcctcccgccccacctgccgccccggagccgctgggcggcatctgcgagcacgagacg
tccatcgacatcagcgcctacatcgacccggccgccttcaacgacgagttcctggccgac
ctgttccagcacagccggcagcaggagaaggccaaggcggccgtgggccccacgggcggc
ggcggcggcggcgactttgactacccgggcgcgcccgcgggccccggcggcgccgtcatg
cccgggggagcgcacgggcccccgcccggctacggctgcgcggccgccggctacctggac
ggcaggctggagcccctgtacgagcgcgtcggggcgccggcgctgcggccgctggtgatc
aagcaggagccccgcgaggaggatgaagccaagcagctggcgctggccggcctcttccct
taccagccgccgccgccgccgccgccctcgcacccgcacccgcacccgccgcccgcgcac
ctggccgccccgcacctgcagttccagatcgcgcactgcggccagaccaccatgcacctg
cagcccggtcaccccacgccgccgcccacgcccgtgcccagcccgcaccccgcgcccgcg
ctcggtgccgccggcctgccgggccctggcagcgcgctcaaggggctgggcgccgcgcac
cccgacctccgcgcgagtggcggcagcggcgcgggcaaggccaagaagtcggtggacaag
aacagcaacgagtaccgggtgcggcgcgagcgcaacaacatcgcggtgcgcaagagccgc
gacaaggccaagcagcgcaacgtggagacgcagcagaaggtgctggagctgaccagtgac
aatgaccgcctgcgcaagcgggtggaacagctgagccgcgaactggacacgctgcggggc
atcttccgccagctgccagagagctccttggtcaaggccatgggcaactgcgctgctgtc
acggatattactgttatctcctggatctcctgggaatctgtgaacgtggggtttggccct
gacacctgcgatgagccactgggcctgcccaggaggccacaggacaaaggatttatcccg
gaacaatctgaaggcactgtggtctgtcatgctgaaatatatgcctcattcagcatcaca
agtgctacttgcctggagccaggaccactgggcatggagctgaaggctacagaaccctgg
ctcacagtgggccttcagtctcgtaccggacacctcagtgccctggacgtgtcaaggccc
ccctcacctaatttcccaaaccttggctgccagagccacgggaggacccagtccaagtgg
gtgtgggaggactctggagtcaccgggcagcacagcccgcagggcccagctggcggatgc
ctgacggccgctgagacggatatcagtggaagtgcccagagaggaaggcagcaggtggac
acagccacagtgaaccgcacaccgaggcagccgacaccgctggagccctctttgtggctg
ccccacctgcccgttctccagcttccggagacgttgccccaggttgtctgctgtagcaac
agcggcagcactgggctcann

>gi568815579f:33279240_33479689|GENSCAN_predicted_peptide_2|324_aa
MASHLVLNNGTKMPILGLGTWKSPPGRVTEAVNVAINVGYCHIDCAHHENEVGVAIQEKL
REQVVKREELFIVTWEGIFPLNELGNVVPSDTNILDTWAAMEELVDEWLMKAIGISNFNH
LQVERLLNKPGLKYKPVVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPVGTPSRPWVNPE
DPSLLRDPRIKAIAAKHNKTTAQVLIRFPMQRNLGVIPKSVTPELIADNFKVFDFELNSQ
DMTALLSYNRNWRVCALKPLESHRNVITEPPTSIGIQGKIHAMEVRQAVFALNIFSNQLQ
FSKCNFIILQINRARFKHMTLKAN

>gi568815579f:33279240_33479689|GENSCAN_predicted_CDS_2|975_bp
atggccagccaccttgtgctcaacaatggcaccaagatgcccatcctggggctgggcacc
tggaagtcccctccaggccgggtgactgaggccgtgaatgtggccatcaatgtcgggtac
tgccacattgactgtgcccaccatgagaatgaggtgggggtggccattcaggagaagctc
agggagcaggtggtaaagcgtgaggagctcttcatcgttacctgggagggaatttttcca
ttgaatgagttgggtaatgtggttcccagtgacaccaacattctggacacatgggcagcc
atggaagagctggtggatgaatggctgatgaaagctattggcatctccaacttcaaccac
ctccaagtggagaggctcttaaacaaacctggcttaaagtataagcctgtggttaaccag
attgagtgccacccttacctcactcaggagaagttaatccagtactgccagtccaaaggc
atcgtggtgaccgcctatagccccgttggcactcccagcaggccctgggtcaaccccgag
gacccttccctcctgagggatcccaggatcaaggcgattgcagccaagcacaataaaact
acagcccaggtcctgatccggttccccatgcagaggaatttgggtgtgatccccaagtct
gtgacaccagaactcattgctgacaactttaaggtttttgactttgaactgaacagccag
gatatgaccgccttactcagctacaacaggaattggagagtctgtgccttgaaaccactt
gagtcacacaggaacgtcatcactgagccgcccaccagtatcggcatccaaggtaagatc
catgccatggaagttaggcaggcagtttttgccctcaacatcttcagtaatcagcttcaa
ttttctaagtgcaacttcatcattctgcagatcaacagggctcgcttcaaacacatgacg
cttaaggccaactga

>gi568815579f:33279240_33479689|GENSCAN_predicted_peptide_3|219_aa
MAAAARAAPASRGSRWPRLRNGRRLPVSQQHRDASELVHVKIFWQLSVETIDHPALISTC
SVLARESAQMSKISQQNSTPGVNGISVIHTQAHASGLQQVPQLVPAGPGGGGKAVAPSKQ
SKKSSPMDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKIKLL
TKELSVLKDLFLEHAHNLADNVQSISTENTTADGDNAGQ

>gi568815579f:33279240_33479689|GENSCAN_predicted_CDS_3|660_bp
atggcggcggcggcgcgcgcggccccggcgagcaggggaagccggtggccgcggctgcgg
aacgggcggaggctgccggtttcgcagcagcacagggatgcttcagagctggtacatgtg
aagattttttggcagcttagcgtggaaaccattgatcaccctgctctcatttctacctgt
tctgtgttggcaagggagagtgcccaaatgagcaagatatcgcagcaaaacagcactcca
ggggtgaacggaattagtgttatccatacccaggcacatgccagcggcttacagcaggtt
cctcagctggtgcctgctggccctgggggaggaggcaaagctgtggctcccagcaagcag
agcaaaaagagttcgcccatggatcgaaacagtgacgagtatcggcaacgccgagagagg
aacaacatggctgtgaaaaagagccggttgaaaagcaagcagaaagcacaagacacactg
cagagagtcaatcagctcaaagaagagaatgaacggttggaagcaaaaatcaaattgctg
accaaggaattaagtgtactcaaagatttgtttcttgagcatgcacacaaccttgcagac
aacgtacagtccattagcactgaaaatacgacagcagatggcgacaatgcaggacagtag

>gi568815579f:33279240_33479689|GENSCAN_predicted_peptide_4|721_aa
MLRTAPACLLGRAWGLLGRLPGLSYPKVEFARVIPGILRLEDFLELALCLWDVSSKGLGH
EFSPRTVKRHKAMRGHHTERQKKPPSLTAGSWLSKLEAVVLLIQPFTYSVTQQRTGVGAA
GRGSEELRAAEQAAEAEHRICCRRPVSDAAMLVPATRTTRQALAQLCGGTRCVRIKHGPQ
FGMSTPQCSPLEDQNCAAPGSHASTGPLCRHSCPELGCPLCGVVNVAGKGDQCRAALCSL
FEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCKSAVLTRGCVQG
FPEHDVPCSQFFIEATTRRCGQALRPPPLGGHLAQRGPSSGKSSRPGVLTELGRPGPDAH
FQQLVLQHRLETPRRPTGRSCSRHPPRAPGIAGSGDQKLLLSWAGGMGSFPVCRGPGGVA
VTRKGGRDAQERTGERSPCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSR
AVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGI
DVHDVGGYPEAFWGPLADKGGWGPSPDKVPRPSEDHPEAPGQRPRGKCCGAGATPARLWC
LLIASRLACSLQGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARA
SFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMAGCDKAFTPFSGP
K

>gi568815579f:33279240_33479689|GENSCAN_predicted_CDS_4|2166_bp
atgctgaggacggctcccgcctgcctcttaggcagggcatggggcctgctgggaaggctg
cctggtttaagctaccccaaagttgaatttgcaagagttattcctggcatcctccgattg
gaggattttttggaacttgccctgtgtctctgggatgtcagcagcaaaggtttaggacat
gaatttagcccgaggacagtgaagaggcacaaggccatgcgtggccatcatacagagagg
cagaagaagcctccatctctaacagcaggaagttggttaagtaaattagaggctgtggtg
ctgctcatacagccattcacttattcagtcactcaacagaggactggtgtaggagcggca
ggaagagggagtgaggagctccgggcagcagagcaagctgctgaagccgagcaccgcatc
tgctgcagacggcctgtgtctgacgctgccatgttggtgccggctacacgcaccactcgc
caagctctggcccagctgtgcgggggcacacgttgcgtccgcatcaagcatgggccccag
tttggaatgtccacccctcagtgctcaccgcttgaagatcagaactgtgccgcgccgggc
tcacacgcttccacaggccccctgtgccgccacagctgcccagaacttgggtgccctttg
tgtggagttgtcaacgtggccggcaaaggtgaccagtgtcgggctgcactttgcagcctc
ttcgagcactactgctactcccggggcggcatgcgccacagctcctacacctgcatctgc
ggcagtggtgagaactcagccgtgctacactacggacacgccggagctcccaacgaccga
acgatccagaatggggatatgtgcaagtcagcagtgctgacccgtggctgcgtgcagggc
tttcctgagcacgatgtgccgtgctcacagttcttcatagaagccacgacaaggagatgt
gggcaggccctgcggcctccgcccctcggtggccacctggcacagcgtgggccctcttcg
ggcaagagcagcaggcccggtgtcctcaccgagctgggcaggccaggccctgatgcccac
ttccagcagctggttctgcagcacaggctggagacacccaggaggcccacaggacgcagc
tgctcccgtcacccaccgcgtgcaccagggattgctggctctggggaccagaagctgctg
ctgtcatgggctggcggcatgggcagctttcctgtctgccgaggccctggaggagtggcc
gtcacacgaaaagggggcagagatgcccaggaacgcactggagagaggtccccttgcctg
ttcgacatgggcggtgagtattactgcttcgcttccgacatcacctgctcctttcccgcc
aacggcaagttcactgcagaccagaaggccgtctatgaggcagtgctgcggagctcccgt
gccgtcatgggtgccatgaagccaggtgtctggtggcctgacatgcaccgcctggctgac
cgcatccacctggaggagctggcccacatgggcatcctgagcggcagcgtggacgccatg
gtccaggctcacctgggggccgtgtttatgcctcacgggcttggccacttcctgggcatt
gacgtgcacgacgtgggaggctacccagaggcattctggggcccgttggcagataaggga
ggctgggggccatctccagacaaggttccccggccctcagaggaccacccagaggctccc
ggtcagcggcccagaggcaagtgttgtggggccggggccacaccagccaggctgtggtgt
ctcctcatcgcctcccgcctggcctgctctctccagggcgtggagcgcatcgacgagccc
ggcctgcggagcctgcgcactgcacggcacctgcagccaggcatggtgctcaccgtggag
ccgggcatctacttcatcgaccacctcctggatgaggccctggcggacccggcccgcgcc
tccttccttaaccgcgaggtcctgcagcgctttcgcggttttggcggggtccgcatcgag
gaggacgtcgtggtgactgacagcggcatagagctgctgacctgcgtgccccgcactgtg
gaagagattgaagcatgcatggcaggctgtgacaaggcctttacccccttctctggcccc
aagtag

>gi568815579f:33279240_33479689|GENSCAN_predicted_peptide_5|363_aa
XFDEKSANNLIEDPLAWDQGGILKDEWASAVEKEGVGESDPGKRTTRSQKQEKGWWLCVA
SAEPGSRAREQLERQAVAGRFCGLGKVSLRCRVPASFPSDKWLAVPAVQRHGDRVSQRLA
GMGCSLEVPKGLLPLMGVGEPPGPSHSRHPRLPRGLCLGCLDGGQLSRVFKTDMELEVLR
YTNKISSEAHREVMKAVKVGMKEYELESVPEPDPAQPGDRAAWAMGQGPGDLEYPPFLSP
HAFQKILIQTYHLLVRKTLPAGVIIPGPLSSVDDMNGFIQEGLSPYLPAGMSALEAWSHP
ALVQQCSPGATLHECATSLVDAPVTALGVPSLAAVFPGDVVTNPSEPDSPVVIEESGLHY
WAG

>gi568815579f:33279240_33479689|GENSCAN_predicted_CDS_5|1092_bp
ngttttgatgagaaatcagctaataatctaattgaggatcccttagcttgggaccaagga
ggtatcctgaaagatgaatgggcatcggctgtggaaaaagaaggagtaggagagagtgac
cctggcaaaaggaccactcgttcacagaaacaagagaaagggtggtggctctgtgtggcc
agtgcggagccagggagcagagcccgagaacagttggagagacaggcagtggctggaagg
ttctgtggtctcgggaaggtgtcgctgcgctgcagggtgcccgcctcgtttcccagtgac
aaatggctggctgtcccagctgtgcagcgtcacggagaccgtgtgagtcagcggctggct
ggcatgggctgctcccttgaagttcccaagggcttgctgcctctgatgggagtgggggag
ccaccaggcccctcgcattcccgccatcctcgcctgcctcggggcctctgtctgggctgc
ctcgatggaggccagctcagccgagtgtttaagacggatatggagctggaggttctgcgc
tataccaataaaatctccagcgaggcccaccgtgaggtaatgaaggctgtaaaagtggga
atgaaagaatatgagttggaaagcgtcccagagcccgaccctgcccaacctggggacagg
gctgcatgggctatgggtcaggggccaggggacctggaatacccgccgttccttagccct
catgccttccagaaaatcctcatccagacctatcacctgctggtgcgaaagacgctccct
gcgggagtaattattccgggccctctgagttctgtggatgacatgaatggtttcatccag
gaagggctgtctccatacctgccggcaggcatgtctgctcttgaagcctggagtcatccg
gcactggtgcagcagtgttcccctggggccaccctccatgagtgtgccacaagccttgtg
gatgcacctgtgacagcacttggggtcccctcattggcggccgtatttcctggggatgtg
gtcaccaaccccagtgagcctgatagcccagtggttatcgaggaatcaggtctgcactac
tgggctggctga