GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:30:38

Sequence gi568815578f:50091034_50292068 : 201035 bp : 50.99% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   5702   5791   90  1  0   88   38   118 0.751   4.52
 1.02 PlyA +   6241   6246    6                               1.05

 2.00 Prom +  16523  16562   40                               0.74
 2.01 Init +  17699  17721   23  1  2   99   59    19 0.342  -0.73
 2.02 Intr +  22118  22318  201  2  0   51   53   147 0.280   5.90
 2.03 Term +  24853  24919   67  1  1   88   48    71 0.308   0.51
 2.04 PlyA +  28240  28245    6                               1.05

 3.09 PlyA -  32754  32749    6                               1.05
 3.08 Term -  34146  34025  122  1  2   97   32   198 0.999  13.74
 3.07 Intr -  37154  36942  213  0  0   76   80   331 0.996  29.79
 3.06 Intr -  38657  38513  145  2  1   90   85   312 0.999  30.96
 3.05 Intr -  39914  39823   92  0  2   98  113    70 0.828  10.21
 3.04 Intr -  48424  48303  122  0  2   -3   61   159 0.551   4.24
 3.03 Intr -  49732  49630  103  2  1   64   65    66 0.843   1.13
 3.02 Intr -  52588  52469  120  2  0  130   97    87 0.986  14.27
 3.01 Init -  62604  62484  121  0  1  107  110   199 0.971  24.35
 3.00 Prom -  87364  87325   40                              -4.56

 4.00 Prom +  91579  91618   40                              -4.96
 4.01 Sngl + 100001 101038 1038  1  0   41   43  2102 0.909 196.13
 4.02 PlyA + 101610 101615    6                               1.05

 5.06 PlyA - 101676 101671    6                               1.05
 5.05 Term - 111960 111657  304  2  1   27   41   183 0.834   2.14
 5.04 Intr - 119401 119215  187  2  1  108   80   111 0.946  11.05
 5.03 Intr - 122551 122433  119  0  2  126   54    63 0.959   6.81
 5.02 Intr - 124801 124672  130  2  1  105   75   -10 0.842  -0.85
 5.01 Init - 127154 127073   82  2  1   75   82    71 0.783   6.33
 5.00 Prom - 127452 127413   40                             -13.43

 6.00 Prom + 127600 127639   40                              -6.66
 6.01 Sngl + 128843 129139  297  1  0  111   49   211 0.979  15.30
 6.02 PlyA + 129449 129454    6                               1.05

 7.00 Prom + 136647 136686   40                              -3.36
 7.01 Init + 146425 146552  128  0  2   92   47   133 0.060   9.26
 7.02 Intr + 152506 152604   99  1  0   93   92   111 0.203  11.23
 7.03 Intr + 162363 162574  212  0  2   16   64   134 0.002   2.36
 7.04 Intr + 178670 178838  169  0  1   63   42    63 0.067  -1.80
 7.05 Intr + 179692 179828  137  1  2   55   46    99 0.062   2.61
 7.06 Intr + 182938 183084  147  2  0   85   65    26 0.154   0.21
 7.07 Intr + 186810 186947  138  1  0   62   88    32 0.033   1.04
 7.08 Intr + 187710 187733   24  1  0   82  115    16 0.061   1.70
 7.09 Intr + 188778 189012  235  1  1   61  -33   162 0.377  -1.85
 7.10 Term + 192226 192400  175  1  1  107   42   136 0.229   8.13
 7.11 PlyA + 193616 193621    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:50091034_50292068|GENSCAN_predicted_peptide_1|29_aa
TPANCAISYSFLAFFEFFQQSEIARDFYS

>gi568815578f:50091034_50292068|GENSCAN_predicted_CDS_1|90_bp
accccagctaactgtgccatctcctactcctttctggccttcttcgagttcttccaacag
tcggaaattgcgagggacttttactcctaa

>gi568815578f:50091034_50292068|GENSCAN_predicted_peptide_2|96_aa
MGLQAQEVPAPSSPPPYPSPGPDAQARAHAHTPPLTPAPETCTTRGLEGSFPSLLEKGNI
CVLEGPATCKSPHIGKLLASKIDNNNSRAELIAGRG

>gi568815578f:50091034_50292068|GENSCAN_predicted_CDS_2|291_bp
atggggctccaagcccaagaggtgccggccccttcttcaccccccccttacccgtccccc
ggccctgatgcgcaggcgcgcgcgcacgcacatacgccgccgctgacgcccgccccggag
acctgcacgacccgtggcctggaaggctcttttccttcccttttagagaaaggaaatatc
tgcgtgctcgagggcccagcaacctgcaagtccccacacatcgggaaacttcttgcaagt
aaaattgacaataataattcccgtgccgagctcatcgcaggaagaggttag

>gi568815578f:50091034_50292068|GENSCAN_predicted_peptide_3|345_aa
MAGAENWPGQQLELDEDEASCCRWGAQHAGARELAALYSPGKRLQEWCSVILCFSLIAHN
LVHLLLLARWEDTPLVILGVGRSQKSRKAEARKDVELINTDTRDAALGSKIKLSGSLGGR
LGTATEWTSKVASKGTFGFSHVEVISHCDTHIVVVIAGALIADFLSGLVHWGADTWGSVE
LPIVGKAFIRPFREHHIDPTAITRHDFIETNGDNCLVTLLPLLNMAYKFRTHSPEALEQL
YPWECFVFCLIIFGTFTNQIHKWSHTYFGLPRWVTLLQDWHVILPRKHHRIHHVSPHETY
FCITTGWLNYPLEKIGFWRRLEDLIQGLTGEKPRADDMKWAQKIK

>gi568815578f:50091034_50292068|GENSCAN_predicted_CDS_3|1038_bp
atggcgggcgccgagaactggccgggccagcagctggagctggacgaggacgaggcgtct
tgttgccgctggggcgcgcagcacgccggggcccgcgagctggctgcgctctactcgcca
ggcaagcgcctccaggagtggtgctctgtgatcctgtgcttcagcctcatcgcccacaac
ctggtccatctcctgctgctggcccgctgggaggacacacccctcgtcatactcggtgtt
ggcaggtcccagaaatcaaggaaggcagaagcacgaaaagatgtcgagttaataaacaca
gacacacgtgatgcagcattgggaagcaaaatcaagctaagcgggagtcttgggggtcga
ctgggaacagccaccgagtggaccagcaaggtggccagtaaagggacctttggatttagc
cacgtggaggtcatcagccactgtgacacgcacatcgttgtcgtgattgcaggggctctc
attgctgacttcttgtctggcctggtacactggggtgctgacacatggggctctgtggag
ctgcccattgtggggaaggctttcatccgacccttccgggagcaccacattgacccgaca
gctatcacacggcacgacttcatcgagaccaacggggacaactgcctggtgacactgctg
ccgctgctaaacatggcctacaagttccgcacccacagccctgaagccctggagcagcta
tacccctgggagtgcttcgtcttctgcctgatcatcttcggcaccttcaccaaccagatc
cacaagtggtcgcacacgtactttgggctgccacgctgggtcaccctcctgcaggactgg
catgtcatcctgccacgtaaacaccatcgcatccaccacgtctcaccccacgagacctac
ttctgcatcaccacaggctggctcaactaccctctggagaagataggcttctggcgacgc
ctggaggacctcatccagggcctgacgggcgagaagcctcgggcagatgacatgaaatgg
gcccagaagatcaaataa

>gi568815578f:50091034_50292068|GENSCAN_predicted_peptide_4|345_aa
MQRLVAWDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYGGKAAPAAPPAARPGPRPPA
GELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTFEAAPPAPAPAPASSGQHHDFLSD
LFSDDYGGKNCKKPAEYGYVSLGRLGAAKGALHPGCFAPLHPPPPPPPPPAELKAEPGFE
PADCKRKEEAGAPGGGAGMAAGFPYALRAYLGYQAVPSGSSGSLSTSSSSSPPGTPSPAD
AKAPPTACYAGAAPAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQ
HKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPLLASSGHC

>gi568815578f:50091034_50292068|GENSCAN_predicted_CDS_4|1038_bp
atgcaacgcctggtggcctgggacccagcatgtctccccctgccgccgccgccgcctgcc
tttaaatccatggaagtggccaacttctactacgaggcggactgcttggctgctgcgtac
ggcggcaaggcggcccccgcggcgccccccgcggccagacccgggccgcgcccccccgcc
ggcgagctgggcagcatcggcgaccacgagcgcgccatcgacttcagcccgtacctggag
ccgctgggcgcgccgcaggccccggcgcccgccacggccacggacaccttcgaggcggct
ccgcccgcgcccgcccccgcgcccgcctcctccgggcagcaccacgacttcctctccgac
ctcttctccgacgactacgggggcaagaactgcaagaagccggccgagtacggctacgtg
agcctggggcgcctgggggccgccaagggcgcgctgcaccccggctgcttcgcgcccctg
cacccaccgcccccgccgccgccgccgcccgccgagctcaaggcggagccgggcttcgag
cccgcggactgcaagcggaaggaggaggccggggcgccgggcggcggcgcaggcatggcg
gcgggcttcccgtacgcgctgcgcgcttacctcggctaccaggcggtgccgagcggcagc
agcgggagcctctccacgtcctcctcgtccagcccgcccggcacgccgagccccgctgac
gccaaggcgcccccgaccgcctgctacgcgggggccgcgccggcgccctcgcaggtcaag
agcaaggccaagaagaccgtggacaagcacagcgacgagtacaagatccggcgcgagcgc
aacaacatcgccgtgcgcaagagccgcgacaaggccaagatgcgcaacctggagacgcag
cacaaggtcctggagctcacggccgagaacgagcggctgcagaagaaggtggagcagctg
tcgcgcgagctcagcaccctgcggaacttgttcaagcagctgcccgagcccctgctcgcc
tcctccggccactgctag

>gi568815578f:50091034_50292068|GENSCAN_predicted_peptide_5|273_aa
MLRGHFHTCLIGPQDTGKPQAFRELGAGTTLVSDSCVFFQNCPRIPTLLFLHVCFNTSGE
TIGTVCTCCFITHHRTTCIPHPNNGPAMKVGLGAALFSSVSPGLAQHLVCGKETEVSEVN
DEDNCPQRVFLSTQETTQVKVLGDHAGCHSTARTGHIKMQGPRSQIIKNFKARAGKVTLQ
MRSLAAISSIKSSKSAPSAMGRGEEHNIASLIFLPELQNLNLTTMKHQTNPQGKTCCNAV
QQLPCILKSVKVMKVKERLRNCSTFKATREMWN

>gi568815578f:50091034_50292068|GENSCAN_predicted_CDS_5|822_bp
atgctacgaggacacttccacacctgcctcattgggccccaggacactggtaaacctcag
gcattcagggaacttggggcagggaccaccctggtctcagattcttgtgtgttcttccag
aattgtccacgaatacccacacttctcttcttgcatgtatgttttaacacaagtggtgaa
acaataggcaccgtttgcacctgctgtttcatcactcatcatcggaccacctgtatcccc
caccccaataatggacccgccatgaaggtggggcttggggccgccttattctcttctgta
tccccgggcttagcacagcacctggtgtgtggtaaggaaactgaggtcagtgaggttaac
gatgaggacaactgccctcaaagagtgttcctgagcactcaggagacaactcaggtgaaa
gtactaggtgaccatgccggatgccacagtacagccaggactggccacatcaagatgcag
ggccctcgttcacaaatcattaagaatttcaaggccagagcggggaaagtaaccctacag
atgcgaagtctggcagctatctcctcaatcaagtcatcaaagagtgcaccatcagcaatg
ggacgaggagaagaacataacatcgcttctttgatttttctgccagagctgcagaacctg
aatctcaccacaatgaagcatcagacaaacccacagggaaagacatgctgtaatgctgta
caacagctgccctgtatcctcaaaagtgtcaaggtcatgaaggtcaaggaaagactaagg
aactgttctaccttcaaggcaactagagagatgtggaactaa

>gi568815578f:50091034_50292068|GENSCAN_predicted_peptide_6|98_aa
MAAKAPAISSSYSQAGKALTCPVKNEETIPRSPLADFPISLATDAFHVQPLPIAASGEGD
LISICASNVVGGVHPHPLSGDLAAYERRPLNLGHFDYS

>gi568815578f:50091034_50292068|GENSCAN_predicted_CDS_6|297_bp
atggctgccaaagctcctgccatctcttcctcatacagccaagcaggaaaggccctcaca
tgtcctgttaagaatgaagaaaccattcccagaagccccttggcagacttccccatctca
ctggccacagatgcattccatgtccagcctctgccaattgctgcaagtggggaaggggac
ctaatcagcatctgtgcctcgaatgtcgtgggtggagtccacccacacccactgagcggg
gatctggctgcctacgagcgcagacccctgaacttgggtcattttgactattcctag

>gi568815578f:50091034_50292068|GENSCAN_predicted_peptide_7|487_aa
MHIFVQPPLCAGQSAYGEFPGSTGSTKKGKLNRRGQHDPKACGHRSAAPDMPEEATGSGA
LGPDKSGFGFMLDDFGCLQDELAKRQLRCEQNGLIGSRHNSTTERVSQRTMSHQLSNETI
VVWKPEIRTHRMTGGMTDQMWKMFQPANSIGSACGLNPELDKSSLLCLVIARLPGQNLRP
GLPTHPTQPSTLSQRAPVGTQVRKDVAPPTEADVRSLHRFRLRNPMAASAGSHGATLWPA
FKDHIVATAPPAPALLAAWEPADASSELPFPDQVCIQGSEPETPSQLGETSSREVPQGPV
ITTYPGQWVREITLVGRAVARVLTWPPAGPMGTVWPGFMADIPVPSQCLADEEIQCDEID
ESALQGAGNSGSIDNESPTISSWLKYKNCHGLWRNDKNSKELPCTGHPTPYTLTSSPQLA
WIYRPPLPHCPDSFLLFLKKPWVFPPQGLCRSLEPLSTMDVHGSLTSFRSELGCHSRQPP
SLTLPLA

>gi568815578f:50091034_50292068|GENSCAN_predicted_CDS_7|1464_bp
atgcacatctttgtgcagccgcctttgtgtgcaggacagtcagcttatggggaattcccg
ggatcaacaggaagtaccaagaaggggaaactgaaccgcaggggccagcatgaccccaag
gcctgtgggcacagatcagctgcccctgacatgccagaggaggccacgggatctggggct
ttggggcctgacaagtctgggtttggattcatgctggatgattttgggtgtctacaggat
gaattagccaaacgacaactccggtgtgagcagaacgggctcattgggtcaagacacaat
tccaccacagaacgggtttcacaaaggaccatgtcccatcaactcagcaatgaaaccatc
gtggtctggaaacctgagatcaggacccacagaatgactggcggaatgacagaccaaatg
tggaagatgttccaaccagcaaattccatcggctctgcctgtggactgaatccagaactc
gacaagtcttccctcctctgtctggtcattgctcgcctgcctgggcagaatctccgccct
ggactccccacccaccccacacagccctccacactcagccagagggctcctgttggaacc
caagtcaggaaggacgtggcccctccaaccgaggcggatgtacggtctctccatagattc
cgcctgcgtaatcccatggccgcttcagctgggtctcatggggccaccctgtggcctgcg
ttcaaggaccacatcgtagcaacagcaccccctgctccagccctgctggctgcctgggag
ccggcagatgcttcctctgagctgccttttccagatcaagtttgcatccaaggaagcgag
cctgagactcccagccagctgggggagacaagttcgagggaagtaccccaagggcctgta
attaccacttaccctggtcaatgggtccgagagattacccttgtaggcagggctgtggcc
agggtgctcacctggcccccagcaggtcccatgggcactgtctggccgggcttcatggct
gacattccagtgccatcccagtgcctggcagatgaggagattcaatgtgatgaaattgat
gagagtgccctgcagggagccggaaactcagggagcatcgataatgagtcccccaccatc
agcagctggcttaaatataaaaactgtcatggcctctggagaaatgacaagaattcgaag
gagcttccctgcactggccaccctacaccctacacccttacttcctcccctcaacttgcc
tggatttatcgacccccactaccccactgccctgatagcttcctgctgttcctcaagaag
ccctgggtctttccacctcaaggtctttgcaggtccctggagcccttgtccaccatggat
gtccacggctccctcacctccttcaggtctgagctcggatgccactctcgacagccacct
tctctgacccttcccctggcttaa