Result of FASTA (ccds) for pF1KB9038
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9038, 444 aa
  1>>>pF1KB9038 444 - 444 aa - 444 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4743+/-0.000895; mu= 16.8040+/- 0.054
 mean_var=69.7880+/-13.604, 0's: 0 Z-trim(105.9): 38  B-trim: 0 in 0/51
 Lambda= 0.153527
 statistics sampled from 8616 (8653) to 8616 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.634), E-opt: 0.2 (0.266), width:  16
 Scan time:  2.910

The best scores are:                                      opt bits E(32554)
CCDS4687.1 TUBB gene_id:203068|Hs108|chr6          ( 444) 2987 670.8 7.4e-193
CCDS7039.1 TUBB4B gene_id:10383|Hs108|chr9         ( 445) 2929 658.0 5.5e-189
CCDS12168.1 TUBB4A gene_id:10382|Hs108|chr19       ( 444) 2893 650.0 1.4e-186
CCDS4485.1 TUBB2B gene_id:347733|Hs108|chr6        ( 445) 2885 648.2 4.7e-186
CCDS4484.1 TUBB2A gene_id:7280|Hs108|chr6          ( 445) 2866 644.0 8.7e-185
CCDS10988.1 TUBB3 gene_id:10381|Hs108|chr16        ( 450) 2793 627.9 6.5e-180
CCDS11858.1 TUBB6 gene_id:84617|Hs108|chr18        ( 446) 2741 616.3 1.9e-176
CCDS7051.1 TUBB8 gene_id:347688|Hs108|chr10        ( 444) 2738 615.7  3e-176
CCDS78124.1 TUBB gene_id:203068|Hs108|chr6         ( 372) 2492 561.1 6.5e-160
CCDS13475.1 TUBB1 gene_id:81027|Hs108|chr20        ( 451) 2433 548.1 6.5e-156
CCDS56012.1 TUBB3 gene_id:10381|Hs108|chr16        ( 378) 2347 529.0 3.1e-150
CCDS2438.1 TUBA4A gene_id:7277|Hs108|chr2          ( 448) 1296 296.3 4.2e-80
CCDS8782.1 TUBA1C gene_id:84790|Hs108|chr12        ( 449) 1293 295.6 6.7e-80
CCDS31792.1 TUBA1B gene_id:10376|Hs108|chr12       ( 451) 1288 294.5 1.4e-79
CCDS76556.1 TUBA1C gene_id:84790|Hs108|chr12       ( 519) 1286 294.1 2.2e-79
CCDS33290.1 TUBA3D gene_id:113457|Hs108|chr2       ( 450) 1281 293.0 4.2e-79
CCDS9284.1 TUBA3C gene_id:7278|Hs108|chr13         ( 450) 1281 293.0 4.2e-79
CCDS8781.1 TUBA1A gene_id:7846|Hs108|chr12         ( 451) 1280 292.7 4.9e-79
CCDS58227.1 TUBA1A gene_id:7846|Hs108|chr12        ( 451) 1280 292.7 4.9e-79
CCDS13751.1 TUBA8 gene_id:51807|Hs108|chr22        ( 449) 1262 288.7 7.8e-78
CCDS2158.1 TUBA3E gene_id:112714|Hs108|chr2        ( 450) 1251 286.3 4.2e-77
CCDS63131.1 TUBA4A gene_id:7277|Hs108|chr2         ( 433) 1244 284.8 1.2e-76
CCDS58226.1 TUBA1A gene_id:7846|Hs108|chr12        ( 416) 1173 269.0 6.3e-72
CCDS54495.1 TUBA8 gene_id:51807|Hs108|chr22        ( 383) 1092 251.1 1.5e-66
CCDS53491.1 TUBAL3 gene_id:79861|Hs108|chr10       ( 406) 1079 248.2 1.1e-65
CCDS7066.2 TUBAL3 gene_id:79861|Hs108|chr10        ( 446) 1079 248.2 1.2e-65
CCDS11433.1 TUBG1 gene_id:7283|Hs108|chr17         ( 451) 1007 232.3 7.9e-61
CCDS32658.1 TUBG2 gene_id:27175|Hs108|chr17        ( 451)  998 230.3 3.1e-60
CCDS77153.1 TUBB6 gene_id:84617|Hs108|chr18        ( 104)  555 131.8 3.1e-31
CCDS5100.1 TUBE1 gene_id:51175|Hs108|chr6          ( 475)  524 125.3 1.3e-28
CCDS54154.1 TUBD1 gene_id:51174|Hs108|chr17        ( 396)  471 113.5 3.9e-25
CCDS11620.1 TUBD1 gene_id:51174|Hs108|chr17        ( 453)  471 113.5 4.3e-25
CCDS54152.1 TUBD1 gene_id:51174|Hs108|chr17        ( 351)  449 108.6   1e-23
CCDS54153.1 TUBD1 gene_id:51174|Hs108|chr17        ( 398)  449 108.6 1.1e-23


>>CCDS4687.1 TUBB gene_id:203068|Hs108|chr6               (444 aa)
 initn: 2987 init1: 2987 opt: 2987  Z-score: 3575.8  bits: 670.8 E(32554): 7.4e-193
Smith-Waterman score: 2987; 100.0% identity (100.0% similar) in 444 aa overlap (1-444:1-444)

               10        20        30        40        50        60
pF1KB9 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
              370       380       390       400       410       420

              430       440    
pF1KB9 EYQQYQDATAEEEEDFGEEAEEEA
       ::::::::::::::::::::::::
CCDS46 EYQQYQDATAEEEEDFGEEAEEEA
              430       440    

>>CCDS7039.1 TUBB4B gene_id:10383|Hs108|chr9              (445 aa)
 initn: 2929 init1: 2929 opt: 2929  Z-score: 3506.4  bits: 658.0 E(32554): 5.5e-189
Smith-Waterman score: 2929; 97.7% identity (99.5% similar) in 443 aa overlap (1-443:1-443)

               10        20        30        40        50        60
pF1KB9 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
       ::::::.:::::::::::::::::::::::::::::::::::::.::.::::::::::::
CCDS70 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
       :::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS70 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS70 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS70 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
CCDS70 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS70 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
       :::..:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS70 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
              370       380       390       400       410       420

              430       440     
pF1KB9 EYQQYQDATAEEEEDFGEEAEEEA 
       ::::::::::::: .: ::::::  
CCDS70 EYQQYQDATAEEEGEFEEEAEEEVA
              430       440     

>>CCDS12168.1 TUBB4A gene_id:10382|Hs108|chr19            (444 aa)
 initn: 2909 init1: 2872 opt: 2893  Z-score: 3463.3  bits: 650.0 E(32554): 1.4e-186
Smith-Waterman score: 2893; 96.8% identity (99.3% similar) in 443 aa overlap (1-443:1-442)

               10        20        30        40        50        60
pF1KB9 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
       ::::::.:::::::::::::::::::::::::::::::::::::.::.:::::::::.::
CCDS12 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
       :::.::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
CCDS12 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
       ::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS12 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
CCDS12 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
       :::::::::::::::::::::::::::::::.::.:::::::::::::::::::::::::
CCDS12 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
       ::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
              370       380       390       400       410       420

              430       440     
pF1KB9 EYQQYQDATAEEEEDFGEEAEEEA 
       :::::::::::: : : ::::::  
CCDS12 EYQQYQDATAEEGE-FEEEAEEEVA
              430        440    

>>CCDS4485.1 TUBB2B gene_id:347733|Hs108|chr6             (445 aa)
 initn: 2882 init1: 2882 opt: 2885  Z-score: 3453.7  bits: 648.2 E(32554): 4.7e-186
Smith-Waterman score: 2885; 95.7% identity (99.3% similar) in 445 aa overlap (1-444:1-445)

               10        20        30        40        50        60
pF1KB9 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
       ::::::::::::::::::::::::::::::::::.:::::::::.::.::::::::.:::
CCDS44 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
       :::.:::::::::::::::::::::::::::::::::::::::::::::.::::::::::
CCDS44 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::.::.::::
CCDS44 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
       :::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
CCDS44 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
       :::..:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
              370       380       390       400       410       420

              430        440    
pF1KB9 EYQQYQDATAEEEEDFGEE-AEEEA
       ::::::::::.:. .: :: .:.::
CCDS44 EYQQYQDATADEQGEFEEEEGEDEA
              430       440     

>>CCDS4484.1 TUBB2A gene_id:7280|Hs108|chr6               (445 aa)
 initn: 2863 init1: 2863 opt: 2866  Z-score: 3431.0  bits: 644.0 E(32554): 8.7e-185
Smith-Waterman score: 2866; 95.3% identity (99.1% similar) in 445 aa overlap (1-444:1-445)

               10        20        30        40        50        60
pF1KB9 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
       ::::::::::::::::::::::::::::::::::.:::::::::.::.::::::.:.:::
CCDS44 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
       :::.:::::::::::::::::::::::::::::::::::::::::::::.::::::::::
CCDS44 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
       :::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
CCDS44 EPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::.::.::::
CCDS44 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
       :::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
CCDS44 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
       :::..:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
              370       380       390       400       410       420

              430        440    
pF1KB9 EYQQYQDATAEEEEDFGEE-AEEEA
       ::::::::::.:. .: :: .:.::
CCDS44 EYQQYQDATADEQGEFEEEEGEDEA
              430       440     

>>CCDS10988.1 TUBB3 gene_id:10381|Hs108|chr16             (450 aa)
 initn: 2793 init1: 2793 opt: 2793  Z-score: 3343.5  bits: 627.9 E(32554): 6.5e-180
Smith-Waterman score: 2793; 92.6% identity (97.7% similar) in 444 aa overlap (1-444:1-444)

               10        20        30        40        50        60
pF1KB9 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
       ::::::::::::::::::::::::::::::::.:.: :::::::.:::::::::.. :::
CCDS10 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
       ::::::::::::::::::: ::..::::::.:::::::::::::::::::::::::::::
CCDS10 PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
       ::: :.::::::::::::::::::::::::::::.:::::::::::::::::::::::::
CCDS10 RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
       ::::::::.::::::::::::::::::::::::::::.:::::::::::::::::::: :
CCDS10 EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
       ::::::::::::::::::::::::::::::::::.:::::::::::::::::.:::::::
CCDS10 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
       ::::::::::::::.:::::::::::::::: .:.:::::::::::::::.:::::::::
CCDS10 AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
       :::. :::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
              370       380       390       400       410       420

              430       440          
pF1KB9 EYQQYQDATAEEEEDFGEEAEEEA      
       ::::::::::::: .. :. :::.      
CCDS10 EYQQYQDATAEEEGEMYEDDEEESEAQGPK
              430       440       450

>>CCDS11858.1 TUBB6 gene_id:84617|Hs108|chr18             (446 aa)
 initn: 2741 init1: 2741 opt: 2741  Z-score: 3281.3  bits: 616.3 E(32554): 1.9e-176
Smith-Waterman score: 2741; 91.0% identity (96.6% similar) in 443 aa overlap (1-443:1-443)

               10        20        30        40        50        60
pF1KB9 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
       :::::::::::::::::.::::::::::::::.: : ::: :::.::.:::::... :::
CCDS11 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERINVYYNESSSQKYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
       ::: :::::::::::::::::::.::::::.:::.:::::::::::::::::::.:::::
CCDS11 PRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
       ::: : ::::::::::::::::::::::::::::::::.::::::::::.::::::::::
CCDS11 RKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
CCDS11 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::.:::.:::
CCDS11 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
       ::::::::::::::.:::: ::::::::::: .:.:::::::::::::::.:::::::::
CCDS11 AACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
       :::: ::::::::::::::::::::.:::::::::::.::::::::::::::::::::::
CCDS11 LKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVS
              370       380       390       400       410       420

              430       440      
pF1KB9 EYQQYQDATAEEEEDFGEEAEEEA  
       ::::::::::.. :.  :. :::   
CCDS11 EYQQYQDATANDGEEAFEDEEEEIDG
              430       440      

>>CCDS7051.1 TUBB8 gene_id:347688|Hs108|chr10             (444 aa)
 initn: 2777 init1: 2730 opt: 2738  Z-score: 3277.8  bits: 615.7 E(32554): 3e-176
Smith-Waterman score: 2738; 89.4% identity (97.1% similar) in 443 aa overlap (1-443:1-442)

               10        20        30        40        50        60
pF1KB9 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
       :::::  : :::::::::::::::::::.:: .::::::: :::.::.::::::.::.::
CCDS70 MREIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVYYNEASGGRYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
       :::.:::::::::::::::::::.::::::.::: :::::::::::::::::..::.:::
CCDS70 PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAELMESVMDVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
       :::::::::::::::::::::::::::::::.:::::::::::.::::..::::::::::
CCDS70 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILPSPKVSDTVV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
       ::::::::::::.::.:::.::::::::::: .:::: ::::::::::::::::::::::
CCDS70 EPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSATMSGVTTCL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
       :::::::::::::::::::::::::::::::::::::::::::::: :::::.:::::::
CCDS70 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
       ::::::::::::.::.::::: :.::::::.:.:.::::::..:.:::::::::::::::
CCDS70 AACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPRG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
       :::..:::::.:::::::::.:::::::::::::::::::::::::::::::::::::::
CCDS70 LKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
              370       380       390       400       410       420

              430       440     
pF1KB9 EYQQYQDATAEEEEDFGEEAEEEA 
       :::::::::::::::  : ::::  
CCDS70 EYQQYQDATAEEEEDE-EYAEEEVA
              430        440    

>>CCDS78124.1 TUBB gene_id:203068|Hs108|chr6              (372 aa)
 initn: 2492 init1: 2492 opt: 2492  Z-score: 2984.5  bits: 561.1 E(32554): 6.5e-160
Smith-Waterman score: 2492; 100.0% identity (100.0% similar) in 372 aa overlap (73-444:1-372)

             50        60        70        80        90       100  
pF1KB9 QLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA
                                     ::::::::::::::::::::::::::::::
CCDS78                               MDSVRSGPFGQIFRPDNFVFGQSGAGNNWA
                                             10        20        30

            110       120       130       140       150       160  
pF1KB9 KGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 KGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR
               40        50        60        70        80        90

            170       180       190       200       210       220  
pF1KB9 IMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 IMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTY
              100       110       120       130       140       150

            230       240       250       260       270       280  
pF1KB9 GDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 GDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYR
              160       170       180       190       200       210

            290       300       310       320       330       340  
pF1KB9 ALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 ALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFV
              220       230       240       250       260       270

            350       360       370       380       390       400  
pF1KB9 EWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS78 EWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG
              280       290       300       310       320       330

            410       420       430       440    
pF1KB9 MDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEEA
       ::::::::::::::::::::::::::::::::::::::::::
CCDS78 MDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEEA
              340       350       360       370  

>>CCDS13475.1 TUBB1 gene_id:81027|Hs108|chr20             (451 aa)
 initn: 2447 init1: 2415 opt: 2433  Z-score: 2912.6  bits: 548.1 E(32554): 6.5e-156
Smith-Waterman score: 2433; 79.1% identity (93.5% similar) in 445 aa overlap (1-443:1-445)

               10        20        30        40        50        60
pF1KB9 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
       :::::::: :::::::::::::.:..::::: .:. .: : :::.::::::::: : :::
CCDS13 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISVYYNEAYGRKYV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
       :::.:::::::::::.::. .: .:.::.:: :.::::::::::::::::::...::.::
CCDS13 PRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELIENVLEVV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
       :.:.::::::::::..:::::::::::::::..::::::::::::.:::.::::::::::
CCDS13 RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMPSPKVSDTVV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
       :::::.::.:::.::.:  .:::::::::::::::::::::::::::::: ::::.:: :
CCDS13 EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
       ::::::::::::::::::::::::::::::::::..::::::::.: :::::.:::.: :
CCDS13 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
       :::: :.::::::: .:::.:: ::::.:.:.::..::: ::::::::::.:::::::::
CCDS13 AACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKVAVCDIPPRG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
       :.::.:::::.:::::.:.:.::.:.:::.::::.::::.::::  :: :::.:..::::
CCDS13 LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVS
              370       380       390       400       410       420

              430         440         
pF1KB9 EYQQYQDATA--EEEEDFGEEAEEEA     
       ::::.::: :  ::.:.  :::: :      
CCDS13 EYQQFQDAKAVLEEDEEVTEEAEMEPEDKGH
              430       440       450 




444 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 16:59:10 2016 done: Fri Nov  4 16:59:10 2016
 Total Scan time:  2.910 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com