GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:57:05

Sequence gi568815591f:154970900_155184484 : 213585 bp : 44.17% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    510    689  180  2  0   81   74    96 0.702   6.73
 1.02 Term +   1983   2078   96  2  0   71   54    77 0.593   0.57
 1.03 PlyA +   2815   2820    6                               1.05

 2.06 PlyA -   4404   4399    6                               1.05
 2.05 Term -   4701   4693    9  0  0   77   32     0 0.427  -8.51
 2.04 Intr -   5432   4797  636  2  0   97  103   453 0.807  39.99
 2.03 Intr -  12433  12320  114  1  0   73   86    44 0.848   3.34
 2.02 Intr -  27885  27751  135  0  0  118   86    58 0.955   9.36
 2.01 Init -  32030  31950   81  2  0   85   86   136 0.983  14.07
 2.00 Prom -  35631  35592   40                              -5.76

 3.04 PlyA -  36094  36089    6                               1.05
 3.03 Term -  36731  36563  169  1  1   56   54   116 0.751   2.35
 3.02 Intr -  42401  42261  141  1  0   49  113    79 0.974   5.97
 3.01 Init -  45543  45509   35  0  2   87   81    58 0.961   4.34
 3.00 Prom -  50775  50736   40                              -2.86

 4.03 PlyA -  50965  50960    6                               1.05
 4.02 Term -  65163  65051  113  1  2  -63   37   386 0.717  17.12
 4.01 Init -  73638  73554   85  0  1   82   47    55 0.308   1.78
 4.00 Prom -  79403  79364   40                              -1.66

 5.00 Prom +  79429  79468   40                              -4.76
 5.01 Init +  86338  86415   78  0  0   55   37   124 0.396   5.06
 5.02 Intr +  90374  90407   34  1  1  107   97    44 0.904   5.00
 5.03 Intr +  98907  98941   35  1  2   98   86    10 0.018  -0.26
 5.04 Intr + 100058 100741  684  1  0   37   90  1104 0.021  97.26
 5.05 Term + 104299 104415  117  0  0   40   41   137 0.846   2.74
 5.06 PlyA + 104951 104956    6                              -0.45

 6.00 Prom + 105162 105201   40                              -6.46
 6.01 Init + 106283 106335   53  1  2   78   91     1 0.029   0.04
 6.02 Intr + 111110 111635  526  2  1  -25   18   731 0.017  47.75
 6.03 Term + 113256 113588  333  2  0  127   55   478 0.532  43.01
 6.04 PlyA + 114776 114781    6                               1.05

 7.05 PlyA - 114971 114966    6                               1.05
 7.04 Term - 119762 119745   18  2  0  109   42    17 0.614  -2.48
 7.03 Intr - 120384 120213  172  2  1  101   87    70 0.930   8.15
 7.02 Intr - 123136 123006  131  1  2    5  116    50 0.380  -1.01
 7.01 Init - 124376 124320   57  2  0   86  105    23 0.426   5.11
 7.00 Prom - 126818 126779   40                              -7.16

 8.00 Prom + 127169 127208   40                              -6.56
 8.01 Init + 127897 128025  129  0  0   79   69    69 0.778   4.25
 8.02 Intr + 128095 128204  110  0  2   23   81    45 0.794  -3.62
 8.03 Intr + 128462 128618  157  2  1  -23   29   565 0.749  39.51
 8.04 Term + 129667 129882  216  0  0   79   54   129 0.931   5.74
 8.05 PlyA + 133416 133421    6                               1.05

 9.00 Prom + 135220 135259   40                              -4.86
 9.01 Init + 135576 135747  172  2  1   73   10   132 0.391   3.53
 9.02 Term + 139904 140118  215  0  2   64   42   102 0.128   0.59
 9.03 PlyA + 144001 144006    6                               1.05

10.00 Prom + 144997 145036   40                              -4.56
10.01 Init + 147870 148021  152  2  2   69    9   217 0.494  11.42
10.02 Term + 149030 149219  190  2  1   13   55   127 0.527  -1.18
10.03 PlyA + 151472 151477    6                               1.05

11.00 Prom + 152491 152530   40                              -6.56
11.01 Init + 154664 154727   64  1  1   82  109     5 0.501   3.31
11.02 Term + 158489 158595  107  0  2   67   48   125 0.347   4.97
11.03 PlyA + 158715 158720    6                               1.05

12.09 PlyA - 158774 158769    6                               1.05
12.08 Term - 160053 159910  144  0  0   48   47   126 0.108   2.41
12.07 Intr - 183756 183665   92  1  2  123   74    26 0.338   4.41
12.06 Intr - 183872 183837   36  0  0  113   96    20 0.536   3.53
12.05 Intr - 185613 185562   52  0  1  107   80    29 0.117   2.48
12.04 Intr - 195213 195097  117  0  0   77   30    68 0.200   0.56
12.03 Intr - 200616 200414  203  1  2   42   75   109 0.015   4.00
12.02 Intr - 201078 200907  172  0  1   60   87    44 0.012   1.02
12.01 Init - 211135 211082   54  1  0   51   65    62 0.033   1.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100741  741  1  0   80   90  1083 0.966 102.44
S.002 Sngl - 111545 111105  441  2  0   90   49   664 0.956  58.95
S.003 Term + 202171 202275  105  0  0  105   28    92 0.860   3.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:154970900_155184484|GENSCAN_predicted_peptide_1|91_aa
MAVGLEPSPLEEARGAGLDGEEKSARPAIEMPPKTPTTFIRSLFQPSDLPLAGNMLVLEN
PVILYGLYFLPVMTSSGSQDDCVIVTLLLCG

>gi568815591f:154970900_155184484|GENSCAN_predicted_CDS_1|276_bp
atggccgttggcctggaaccttctccacttgaggaagcgagaggtgcaggcctggatgga
gaggagaaatctgcaaggccagccatcgagatgcctcccaaaacccctaccacattcatc
cgatcactttttcaaccatctgatctgcctctggctggaaacatgttagtcctggagaac
cctgtcattctttatggcctttactttctacctgtcatgacatcctctggctctcaggac
gactgtgtgatcgtcactttgctgctctgtggctga

>gi568815591f:154970900_155184484|GENSCAN_predicted_peptide_2|324_aa
MSDQAPKVPEEMFREVKYYAVGDIDPQVIQLLKAGKAKEVSYNALASHIISEDGDNPEVG
EAREVFDLPVVKVSSEDRSALWALVTFYGGDCQLTLNKKCTHLIVPEPKGEKYECALKRA
SIKIVTPDWVLDCVSEKTKKDEAFYHPRLIIYEEEEEEEEEEEEVENEEQDSQNEGSTDE
KSSPASSQEGSPSGDQQFSPKSNTEKSKGELMFDDSSDSSPEKQERNLNWTPAEVPQLAA
AKRRLPQGKEPGLINLCANVPPVPGNILPPEVRGNLMAAGQNLQSSERSEMIATWSPAVR
TLRNITNNADIQQMNRPSNVAHTK

>gi568815591f:154970900_155184484|GENSCAN_predicted_CDS_2|975_bp
atgtcggaccaggcgcccaaagttcctgaggagatgttcagggaggtcaagtattacgcg
gtgggcgacatcgacccgcaggttattcagcttctcaaggctggaaaagcgaaggaagtt
tcctacaatgcactagcctcacacataatctcagaggatggggacaatccagaggtggga
gaagctcgggaagtctttgacttacctgttgtaaaggtgtcatctgaagacagaagtgcc
ctgtgggctttggttacgttctatgggggagattgccagctaaccctcaataagaaatgc
acgcatttgattgttccagagccaaagggggagaaatacgaatgtgctttaaagcgagca
agtattaaaattgtgactcctgactgggttctggattgcgtatcagagaaaaccaaaaag
gacgaagcattttatcatcctcgtctgattatttatgaagaggaagaagaggaagaggaa
gaggaggaggaagtagaaaatgaggaacaagattctcagaatgagggtagtacagatgag
aagtcaagccctgccagctctcaagaagggtctccttcaggtgaccagcagttttcacct
aaatccaacactgaaaaatctaaaggggaattaatgtttgatgattcttcagattcatca
ccggaaaaacaggagagaaatttaaactggaccccggccgaagtcccacagttagctgca
gcaaaacgcaggctgcctcagggaaaggagcctgggttgattaacttgtgtgccaatgtc
ccacccgtcccaggtaacattttgccccctgaggtccggggtaatttaatggctgctgga
caaaacctccaaagttctgaaagatcagaaatgatagctacctggagtccagctgtacgg
acactgaggaatattactaataatgctgacattcagcagatgaaccggccatcaaatgta
gcacataccaaataa

>gi568815591f:154970900_155184484|GENSCAN_predicted_peptide_3|114_aa
MGLVCSGYGVQRLHATDKHVVHSAGWESVSEYGFPKASAINHLPAENTFDRHLVLLTGSF
PTLNSYMTLVAAVPRRSTDGIFPAEKQCSFEFAVSPSTKLWPVCACNWSILTLS

>gi568815591f:154970900_155184484|GENSCAN_predicted_CDS_3|345_bp
atgggcctagtgtgctcgggctacggtgtacaaaggctccatgcaactgacaagcacgtg
gtgcactctgcggggtgggagtcggtgagcgaatacggattcccaaaagccagcgccata
aatcatttgccagcagagaataccttcgatagacacttggtcttgcttacaggaagtttt
ccgacactgaatagctacatgacactggtggcagctgtgccccgcaggtccactgacggg
atctttcctgcagagaagcagtgctcctttgagttcgcagtttctccttcaactaaacta
tggcctgtttgtgcctgcaactggagtattctgaccctttcatga

>gi568815591f:154970900_155184484|GENSCAN_predicted_peptide_4|65_aa
MHLTSSESIQVCSKLNPCLLGGKRPRGRKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
EEEEI

>gi568815591f:154970900_155184484|GENSCAN_predicted_CDS_4|198_bp
atgcaccttaccagcagcgaatccatacaggtctgcagcaaactcaatccttgcctcctt
ggaggaaagcggccaagaggcagaaaagaagaggaagaggaagaagaagaagaggaagag
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaaatttaa

>gi568815591f:154970900_155184484|GENSCAN_predicted_peptide_5|315_aa
MLNQLQNIHISSLICEVKIGVEKKGQVIGVQVVFGYIRKQPLREATESWTNHSLGKDDLR
PSSPLLSVFGVLILTLLGFLVAATFAWNLLVLATILRVRTFHRVPHNLVASMAVSDVLVA
ALVMPLSLVHELSGRRWQLGRRLCQLWIACDVLCCTASIWNVTAIALDRYWSITRHMEYT
LRTRKCVSNVMIALTWALSAVISLAPLLFGWGETYSEGSEECQVSREPSYAVFSTVGAFY
LPLCVVLFVYWKIYKAAKFRVGSRKTNSVSPISEAVESVCVGPHSAKAAGEISVIIQIVT
TVFGPLNDEVSSVEM

>gi568815591f:154970900_155184484|GENSCAN_predicted_CDS_5|948_bp
atgcttaatcagctgcagaatatccacatcagctcactcatctgcgaagtaaaaattggt
gtggaaaagaagggccaagttattggggtgcaggtggtgtttggttacataagaaaacaa
cccttaagggaagcaactgagagctggaccaaccacagcctcggcaaagacgacctgcgc
cccagctcgcccctgctctcggtcttcggagtgcttattctcaccttgctgggctttctg
gtggcggcgacgttcgcctggaacctgctggtgctggcgaccatcctccgtgtacgcacc
ttccaccgcgtgccccacaacctggtggcatccatggccgtctcggatgtcctggtggcc
gcgctggtcatgccgctgagcctggtgcacgagctgtccgggcgccgctggcagctaggt
cggaggctgtgccagctttggatcgcgtgcgacgtgctttgctgcacggccagcatctgg
aacgtgacggccatagccctggaccgctactggtccatcacgcgccacatggaatacacg
ctccgcacccgcaagtgcgtctccaacgtcatgatcgcgctcacctgggcactctccgct
gtcatctctctggccccgctgctttttggctggggagagacgtactctgagggcagcgag
gagtgccaggtaagccgcgagccttcctacgccgtgttctccaccgtaggcgccttctac
ctgccgctctgtgtggtgctcttcgtgtactggaagatctacaaggctgccaagttccgc
gtgggctccaggaagaccaatagcgtctcacccatatccgaagctgtggagtctgtctgt
gttggtcctcattcagccaaagctgcaggagagatctccgtgattatccagattgtcacc
actgtttttggtcctcttaatgatgaagtttcatctgtggagatgtga

>gi568815591f:154970900_155184484|GENSCAN_predicted_peptide_6|303_aa
MNKGCSTFYLEADPTYCSVIDITSVIITTVNSIFSVTSISSIISIRGVSSGTSIPIVNSI
SSVTSIHSVNDIHTVNSIHGVTSVASIHSVNGIHGVTNVTSIHSVNSIHGVTSVTSIHSV
NGIHGVIRVTSIHSVNRIFSVTSISSVTSIPSVNSISSMIRIHGVSSITSISSVTSILYV
TSVISLHSVTMSQVKDSAKQPQMVFTVRHATVTFQPEGDTWREQKEQRAALMVGILIGVF
VLCWIPFFLTELISPLCSCDIPAIWKSIFLWLGYSNSFFNPLIYTAFNKNYNSAFKNFFS
RQH

>gi568815591f:154970900_155184484|GENSCAN_predicted_CDS_6|912_bp
atgaacaagggctgcagcacattttatttggaagcagatcctacttattgcagtgtcatt
gatatcaccagtgtgatcatcaccactgtgaacagtatcttcagtgtgaccagcatctcc
agtataatcagcatccgtggtgtctccagtgggaccagcatccccattgtgaacagcatc
tccagcgtgaccagcatccacagtgtgaacgacatccacactgtgaacagcatccatggt
gtcaccagtgtggccagcatccacagtgtgaatggcatccatggggtcaccaatgtgacc
agcatccacagtgtgaacagcatccatggtgttaccagtgttaccagcatccacagtgtg
aatggcatccatggtgtcatcagggtgaccagcattcacagtgtgaacagaatcttcagc
gtgaccagcatctccagtgtgaccagcatccccagtgtgaacagcatctctagtatgatc
agaatccatggtgtttccagtataaccagcatctccagtgttaccagcatcctttatgtg
accagtgtgataagcctccacagtgtgaccatgtctcaagtgaaggactctgccaaacag
ccccagatggtgttcacggtccgccacgccaccgtcaccttccagccagaaggggacacg
tggcgggagcagaaggagcagcgggccgccctcatggtgggcatcctcattggcgtgttc
gtgctctgctggatccccttctttctcaccgagctcatcagtcccctctgctcctgtgac
atccccgccatctggaaaagcatcttcctgtggcttggctactccaactccttctttaac
cccctgatctatacggctttcaacaagaactacaacagcgccttcaagaacttcttttct
aggcaacactga

>gi568815591f:154970900_155184484|GENSCAN_predicted_peptide_7|125_aa
MTASDSQDGEGRYPTRGSPLPVIGDFIGSRALLSKAGQGGTQLGIRSVLDSIYSSASTGK
DLRPRTHCTLTVLGQDRGTLGEVTVSPSVAKQEAGGSSVFVNQTTSSFIYVETDLSHVGK
LCYYY

>gi568815591f:154970900_155184484|GENSCAN_predicted_CDS_7|378_bp
atgacagcctctgactctcaggatggagaaggaagatacccaacccgtggctccccgctg
cccgtgataggggacttcattggctctcgggctcttctaagcaaggctggccagggtggc
acccagctggggattcgttcagtcttagattccatttattcttctgcttctactggaaaa
gatttaagaccaaggacccattgcaccttaacggtgctgggacaggacagaggcaccctc
ggtgaggtgacagtgagcccgtcggtggccaaacaggaagctgggggctcatctgtcttt
gtaaatcagaccacctcctctttcatctacgtggaaactgacttgtcgcatgttgggaag
ctttgttattactactga

>gi568815591f:154970900_155184484|GENSCAN_predicted_peptide_8|203_aa
MGRCPPQSEKPKKSSPPHSPQQPHGLASSLPELQVPMTVDTSQEGELKGPVGVPFVPIRC
TTLVASRLKSMVEIEVARPRKKKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEEEEEEKE
EEEEEEEKEEEELTWSANRGCPGIAMTLEAEDLTAGKTLGMLTVQTACCLHPSQWAVSPL
LNQVLRLHLPQRGVGLLWNLDAD

>gi568815591f:154970900_155184484|GENSCAN_predicted_CDS_8|612_bp
atggggcgatgcccaccccagagtgagaaaccaaagaaaagcagccccccccactcacca
cagcagccccacgggctggcatcttccctccctgagctccaggtccccatgactgttgac
acatcccaggaaggggagctaaagggacctgtgggtgtaccttttgtgccaattcgatgt
accactcttgttgcttctagacttaaatctatggtagaaattgaggtggcaaggccaagg
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaaggaggaggaggaggaggaagaagaggaggagaaggag
gaagaggaggaggaggaagaaaaggaggaggaggagctgacctggtcagcaaatagaggc
tgcccagggatagccatgaccttagaggctgaggacctcacagctgggaagaccctgggg
atgctgacggtgcagactgcctgctgcctgcatccctcgcagtgggctgtcagtcctctc
ttgaatcaggttctgcggctgcatctaccacagcgaggggttgggctgctatggaacttg
gatgctgactga

>gi568815591f:154970900_155184484|GENSCAN_predicted_peptide_9|128_aa
MKAMVISAASVQSSSRANIKATNAIQQQTVVLPASSLANTKLMPKTVHLANPNLLPQGSS
LGSSSMLPKHHQAPVVAPFPQSVSFLKDVAPALSISPACSEDFTSKYVNEALSPEGFGEG
IATNSDET

>gi568815591f:154970900_155184484|GENSCAN_predicted_CDS_9|387_bp
atgaaagccatggtcatatctgctgcctctgtccagagctccagcagagccaacattaaa
gccaccaatgccatccaacagcaaactgtcgtgctgccagcatccagcctggccaacacc
aaactcatgccaaagactgtgcaccttgccaaccctaaccttttgcctcagggctcctct
ctgggatcctcctccatgcttccgaaacatcatcaagcccctgtggtagcaccatttcct
cagtccgtgagctttctcaaagacgtagctcctgccctctccatctcaccggcatgcagt
gaagacttcacctccaaatatgtgaatgaggctctgagccctgaaggatttggagaaggc
atagcaacgaattctgatgaaacctaa

>gi568815591f:154970900_155184484|GENSCAN_predicted_peptide_10|113_aa
MDLLATDSHFSLQPQVIRIHNEAEDHEYEEFSVVAGMGKSSTVSSGCSTLCETTETSCRE
GLHKELTHPRMQLPHPDDFIPRTLTNQRTHFSNSSPSMIPLKPPSQNSSGRQI

>gi568815591f:154970900_155184484|GENSCAN_predicted_CDS_10|342_bp
atggacctgctggctacagacagtcatttctcactgcagccgcaggtcattcgaattcac
aatgaagctgaagaccatgaatatgaagagttcagtgtggttgctggcatgggcaaatcc
tcaactgtgtcctcgggctgcagtaccctctgtgaaactactgagaccagctgccgtgaa
ggactccacaaggagctgactcatccaagaatgcaacttccacatcccgatgacttcatc
ccccgtaccctgaccaatcaacgaacccacttttccaactcctcgccctccatgatccct
ttaaaaccccccagccagaactcctcagggagacaaatttga

>gi568815591f:154970900_155184484|GENSCAN_predicted_peptide_11|56_aa
MALGSGRAQPIKGSTHPGKETGAAHQALRRPQAPVRIRILQEDIEAAGSEAVRGVG

>gi568815591f:154970900_155184484|GENSCAN_predicted_CDS_11|171_bp
atggcccttgggtctggaagggctcaacccatcaagggctcaacccatcctggcaaggaa
acaggagcagcccatcaggctctaagaaggccccaggctcccgtgagaattcgaattctg
caggaggacatcgaggcagcaggcagtgaagcggtgaggggtgtgggctga

>gi568815591f:154970900_155184484|GENSCAN_predicted_peptide_12|289_aa
MVVLFNGVCSFGRDVRGVVSVESSFGCGHPCGFLRFLWDTPEGRRCPVKNICSPVLLCDS
AQTARESQRLDFQFPAQLNSDDRRGVVQNHKHFLSDPLWEDKLAKAAQGSPRLQVCVVSD
KAHITGKCLRNTLASHSKSDGKNCTGKIGSHVGLENECKVLPNGGDSSQQMPGEPEGGWS
GKECTSGLTIALADTDNHAEHAQHVPAAAFAGRVTPPGQLHPSLFQIPVVHIMQRLLKNS
PLEWGMGQAATHETGRDLAGSLQLTALAAASQKDEGFSPIGGTSGECGR

>gi568815591f:154970900_155184484|GENSCAN_predicted_CDS_12|870_bp
atggtcgtcctcttcaacggagtgtgcagctttgggagggatgtacgtggagtggtgagt
gttgaatcgtcttttggttgtgggcatccttgtgggtttctgcggtttctctgggacact
cctgaagggcgccggtgcccagtaaagaacatctgctcaccagtgctcttgtgtgacagt
gcccagactgccagagaatcacagagactggatttccagttcccagcacaactgaatagt
gatgaccgccgaggagttgtgcaaaaccataaacactttctttctgaccctttatgggag
gacaagcttgctaaagctgctcagggctcccccaggctccaagtttgtgtggtgtccgac
aaagcccacattacaggaaaatgcttgcgaaacacacttgcatcccacagcaaaagtgat
ggcaaaaattgtactggaaaaattggatcacacgtgggcttggagaatgagtgtaaggtt
ttaccgaatggtggagatagctctcagcagatgcctggggagccagaagggggatggagt
gggaaggagtgcacatcagggctgaccattgcattagctgacacagataatcatgcagaa
catgcccagcacgtccctgctgcagcctttgccggccgtgtgactcccccaggtcagctg
catccttccctcttccaaatccctgtggtgcacatcatgcagagacttctaaagaactca
ccattggaatggggcatgggtcaggcagcgacccatgagaccggaagagacttagccggg
agccttcagctgacggcactggcagcggccagccagaaggatgagggctttagtcctatt
ggtgggaccagcggggagtgtggacggtga