GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:54:50

Sequence gi568815574r:18671938_18873618 : 201681 bp : 37.88% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1055   1338  284  1  2   84   -7   198 0.377   6.46
 1.02 Intr +   1658   1805  148  2  1   58   51    60 0.282  -1.38
 1.03 Intr +   2280   2378   99  2  0  105   86    73 0.948   8.19
 1.04 Term +   3433   3576  144  0  0   80   49    90 0.851   1.23
 1.05 PlyA +   3988   3993    6                               1.05

 2.00 Prom +  24348  24387   40                              -5.05
 2.01 Init +  26938  27083  146  0  2   87   82   120 0.912  10.94
 2.02 Intr +  36751  36909  159  1  0   80   59   103 0.134   4.78
 2.03 Intr +  50563  50610   48  1  0   62  127    71 0.353   5.28
 2.04 Intr +  53716  53866  151  1  1   64   36    86 0.329   0.24
 2.05 Intr +  60866  61054  189  1  0   42  108   186 0.396  14.86
 2.06 Intr +  63730  63760   31  0  1   27   80    40 0.335  -6.11
 2.07 Term +  63930  64405  476  1  2  109   43   194 0.836  11.06
 2.08 PlyA +  64445  64450    6                              -0.45

 3.00 Prom +  67080  67119   40                              -4.95
 3.01 Init +  73204  73413  210  0  0   82   49   242 0.898  18.53
 3.02 Intr +  74545  74744  200  0  2   57   69   110 0.735   3.23
 3.03 Term +  77401  77878  478  1  1  -21   38   266 0.101   4.03
 3.04 PlyA +  78383  78388    6                               1.05

 4.00 Prom +  85199  85238   40                              -5.95
 4.01 Init +  89284  89420  137  0  2   67   80    94 0.533   6.16
 4.02 Intr +  90678  90893  216  0  0   34   69   176 0.699   7.00
 4.03 Term +  97607  97799  193  2  1   18   37   174 0.052   1.21
 4.04 PlyA +  98434  98439    6                               1.05

 5.03 PlyA -  98989  98984    6                               1.05
 5.02 Term - 100690  99998  693  1  0   88   39   363 0.975  23.98
 5.01 Init - 101681 101169  513  2  0   50   63   264 0.986  15.05
 5.00 Prom - 106570 106531   40                              -5.15

 6.00 Prom + 108595 108634   40                              -3.65
 6.01 Init + 120700 120860  161  0  2   62   79   167 0.056  10.63
 6.02 Intr + 130967 131095  129  2  0   40   67   133 0.011   5.29
 6.03 Intr + 156403 156522  120  1  0  103  101    18 0.209   3.29
 6.04 Intr + 168141 168285  145  0  1  106   37    84 0.184   4.46
 6.05 Intr + 169670 169853  184  1  1   63   60    98 0.090   2.94
 6.06 Intr + 177770 177792   23  0  2  104   87    17 0.016  -0.46
 6.07 Intr + 184462 184548   87  0  0   54   84    61 0.003   1.55
 6.08 Term + 197531 197851  321  1  0   81   33   156 0.401   3.24
 6.09 PlyA + 198223 198228    6                               1.05

 7.02 PlyA - 198307 198302    6                               1.05
 7.01 Term - 200891 200751  141  2  0   44   54   126 0.655   1.75

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  53368  53531  164  0  2   57   85   109 0.871   6.75
S.002 Intr - 126766 126473  294  2  0   60   76   120 0.857   4.06
S.003 Init - 127737 127590  148  0  1   90  109    74 0.974  10.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815574r:18671938_18873618|GENSCAN_predicted_peptide_1|224_aa
MRKCSPSLTTHKGWYSKTFTSVGLNPDPPCFQENIRQCLETFLVVTIGVEDATDKIATKD
TAKSTMHTTASLKNLLAPKGKSGAVKIPRISGMTHSPNTLQTCTCEMWVELPACAQQPST
FALSLQIWKAVLSRSPGGARWDVRSNMLPLSDVFSQCELRKKLHKTLKSRGVLDTFKTQL
QNQLIHVLMHPVLNGELHPQFMSVEGSYLLRGTSNSSVADHSQR

>gi568815574r:18671938_18873618|GENSCAN_predicted_CDS_1|675_bp
atgaggaaatgctcaccttccctcacaacacacaaggggtggtactcaaaaacgtttact
tctgtgggtctcaatccagatccaccttgcttccaagaaaacatacggcaatgtttggag
acatttttggttgtcaccattggggtcgaagatgctaccgacaaaatagcgaccaaggat
acagctaaatctacaatgcacacgacagcctccctaaagaatcttctggctccaaaaggc
aaaagtggcgccgttaaaataccacggattagcggaatgacccattctcccaataccctg
cagacgtgcacttgcgagatgtgggtggagcttccggcgtgtgctcagcaaccaagtaca
tttgccttgtctctgcagatctggaaggctgtacttagtaggtctccaggaggggcacga
tgggatgtgaggtccaacatgcttcctctgtctgacgtgttcagtcaatgtgagctacgc
aaaaagctacacaagaccttgaagagtcggggtgtactggacacattcaagacacaactt
caaaaccagctaattcatgtgttgatgcaccctgtattgaatggagaactgcatcctcag
tttatgtcagtggaagggagctacctcctacgaggcacctctaactcttcagtggctgat
cactcacagagatag

>gi568815574r:18671938_18873618|GENSCAN_predicted_peptide_2|399_aa
MEMLKDWSFAEPNLFDVRMAAHLTADSGLILHSEGKQRRGQVTATPGGIEAGKMEMLKDW
SFAEPNLLDVRMAAYLTADSGLILHGEGKQRRGQVTATPWRNFLTAARPQAMQGYKLRLR
NGNFIQSKCKQQIRHAGAMKKPFSQLLNTTPGVWAKDTPPGLAVNHAQEVIAKERLMGKP
FVPHADAGNVPGHLEMDEFSSGDMSHVYAYLEICLLWVLLQLLCPSHINTQETVRTVDVR
AGENRLEHLYESKSYKTALYRNRDQWLSQDPKVRRGIIIKGRGRNVGFALKKGKEIRVKD
KNLRHGGRICHLESVMMRVTTSHPGMSTTHLSQVKWDAVARSGIGGLKSMNMEQRLEVGH
VSNKSQAESPRVLARTPADWSHIHLNNLIRAATLYFLNC

>gi568815574r:18671938_18873618|GENSCAN_predicted_CDS_2|1200_bp
atggagatgttgaaggactggagctttgcagagcctaacttatttgatgtgagaatggca
gcccatttaactgcagattctgggcttatcttgcatagtgaagggaagcagaggagaggg
caagtgactgctacaccaggaggaattgaggctggaaagatggagatgttgaaggactgg
agctttgcagagcctaacttacttgatgtgagaatggcagcctatttaactgcagattct
gggcttatcttgcatggtgaagggaagcagaggagagggcaagtaactgctacaccatgg
agaaattttttaacagctgcaaggccacaagctatgcaaggctacaagttacggctaaga
aatggaaactttatacaaagcaagtgcaagcagcagattagacatgcaggtgcaatgaaa
aaaccattctctcagttacttaataccactcctggagtatgggctaaagacaccccacct
gggttagctgtaaatcatgcacaggaggttattgctaaggaacgactcatgggaaaacca
tttgtgcctcatgcagatgcaggaaacgtgcccgggcatcttgaaatggatgagttctct
tctggagatatgtctcatgtgtacgcatatctggagatatgcctcttgtgggtgctgctg
cagctgctgtgcccatctcatatcaatacccaagaaactgtcagaactgtggatgtgagg
gcaggggagaacagacttgagcacctttatgagagtaagagttataaaactgctctgtac
agaaatagggatcagtggctcagtcaggatcctaaagttaggagagggattataatcaaa
ggcagaggcagaaatgtaggctttgctttgaaaaaggggaaggagatccgtgtaaaggac
aagaacttgcgacatggagggaggatatgtcacttggagtcggtcatgatgagggtgact
acaagtcaccctgggatgagtacaactcatctcagccaagtgaagtgggatgcagtggca
aggagcgggattgggggcttgaagtcgatgaacatggaacagcgacttgaagtaggtcac
gtgtcaaacaaaagccaagcagagtctccccgggtcttggcaaggactcctgcagactgg
tctcacattcatttgaacaatctgatacgggcagctactctttattttctgaactgttag

>gi568815574r:18671938_18873618|GENSCAN_predicted_peptide_3|295_aa
MEPKGLQNNSTDSVLLNHGKVRGPRKDPSHKDGMGAGSPPRVYLVIRPRTQDLLANSNET
YTPTYEEELRTHNPTWPDSKQLLLLLFNTKEHRWMAQSTLHWLEANVPFQAYAQFQFPEE
DPHWDSHALTQFQHLQRLSGRSSATAHQNVSPKGRANSPKETILLAKGEMVNVYTDSKYT
FATLHDNGAIYKEKGLLMAVGKKIKYKEKILQLLDAVCASKKMAVMHCRGHQKAGTLEAK
KNKKIDREARGAAMTTLQFKKKAIAMPLLPKPLLSEVSSYLQMRSPALPKSLENI

>gi568815574r:18671938_18873618|GENSCAN_predicted_CDS_3|888_bp
atggaacctaaggggttacagaacaattccacggacagcgtgctgctgaaccatgggaag
gttcggggcccaaggaaggacccatcccataaagatggaatgggagccggatcacctccc
agggtgtacctagttatccgacccaggacgcaagatttgctcgctaattcaaatgaaacc
tacaccccaacctatgaagaggaactgaggacacataatccaacttggccagatagtaaa
cagcttctgttgctgctgttcaacactaaagagcaccgatggatggctcagtcaaccctc
cactggctagaagccaatgtgccattccaggcatacgctcagttccagttcccagaggaa
gacccccactgggactcacatgctttgacccagtttcagcacctgcagagactcagtggt
agaagctcagccactgcccaccagaatgtcagcccaaaaggcagagctaatagccctaag
gagaccattttgctagcaaaaggcgaaatggtcaatgtttatacagattccaaatatacg
tttgccacgttgcatgacaatggggctatatataaagaaaaaggactcttaatggctgta
ggcaaaaaaataaagtacaaagaaaaaattctgcaactcttagatgctgtatgtgcttcg
aagaagatggctgttatgcactgcagggggcaccaaaaggcaggaacactggaggccaaa
aagaacaaaaagatagacagagaggcaagaggggcagcaatgactacccttcagtttaag
aagaaagccatagctatgcctctacttccaaagcctctcctctcggaggtttcaagttac
ctccaaatgagaagccctgctttgcccaagagtctggaaaatatataa

>gi568815574r:18671938_18873618|GENSCAN_predicted_peptide_4|181_aa
MTDVASASRDHTGESNPGQRVTKVRVGECGTTLKDTWLLLRNPHGETSRSGKNESLPERA
VAKAKGGIKDYGIPHRKLNVALLTLNFLSLSRGQMLSAADQHLQKPAAKTEAEKLVWCEC
CFRKVVQLDPQCIPFHHSNQESPLQIKEGVVRIQLVLSDKDLLLKAEDEKEFLEEAGENH
N

>gi568815574r:18671938_18873618|GENSCAN_predicted_CDS_4|546_bp
atgactgatgtggcttcggcaagtcgtgaccatacgggggaatcaaacccaggtcaaaga
gtcaccaaagtgagggtgggagaatgtggaactacactgaaggacacctggctactctta
agaaatccccatggtgagacaagccgtagcggaaagaatgaatctctccctgaaagagca
gttgcaaaagccaaagggggaatcaaggactacgggataccacataggaaattgaatgta
gcattattgactctaaattttttgagcctgtctagaggccagatgctatcagcagctgat
cagcatctgcagaaaccagctgcaaagacagaagcagaaaaactggtttggtgtgaatgc
tgcttccgaaaagttgtgcagctggatccccagtgtatcccatttcatcacagcaaccag
gaatctccactgcaaataaaggaaggagtggtaaggatacagctagttctttcagacaag
gacctgctactcaaagcagaagatgaaaaagaatttttagaagaagcaggggaaaatcat
aactag

>gi568815574r:18671938_18873618|GENSCAN_predicted_peptide_5|401_aa
MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP
SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK
APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKLKFYYNPNF
KRGYPQLLVRVKRRIGVKNASPISTLFNEDFNKKHFRAGANMENHNSALAAEASEESLFS
ASKNLNMPLTRESSVRQIIANSSVPIRSGFPPPSPSTSVGPSEQIATDQHAILNQLTTIH
MHSHSTYMQARGHIVNFITTTTSQYHIISPLQNGYFGLTVEPSAVPTRYPLVSVNEAPYR
NMLPAGNPWLQMPTIADRSAAPHSRLALQPSPLDKYHPNYN

>gi568815574r:18671938_18873618|GENSCAN_predicted_CDS_5|1206_bp
atggcacatgtttcttcagaaactcaagatgtttcccccaaagatgaattaactgcttca
gaagcctccactaggtctccattgtgtgaacacaccttccctggggactcagacttacgg
tcaatgattgaagaacatgcttttcaggttttgtcacaaggatccttgttagaaagtcca
agttacacagtttgtgtctctgagccagataaagatgatgattttctttctctgaacttt
cccaggaaactttggaaaatagtggaaagtgaccaattcaagtctatttcatgggatgag
aatggaacttgcatagtgattaatgaagaactcttcaagaaagaaattttggaaacaaag
gctccttacagaatatttcaaactgatgctatcaaaagttttgttcgacagctcaacctt
tatggatttagtaaaattcaacagaattttcaaagatctgcctttctagccacctttctg
tcagaagagaaagaatcgtctgtcttaagcaagttaaagttctattataatccaaatttc
aagcgtggctatccccaacttttagtaagagtgaagagaagaattggtgttaaaaatgct
tcacctatatctactttattcaacgaagatttcaacaagaagcattttagagcaggggct
aacatggagaatcataattctgccttagctgctgaagctagtgaagaaagtttattttca
gcctctaaaaatttaaatatgcctctaacaagggaatcttctgtcagacagataattgca
aattcatctgtccccattagaagtggtttccctcctccttcaccttcaacctcagttgga
ccatcagaacaaattgcaacagatcaacatgctattttaaatcagttgaccactattcat
atgcactctcatagtacctacatgcaagcaaggggccacattgtgaattttattacaacc
acaacttctcaataccacatcatatctcccttacaaaatggttattttgggctgacagtg
gaaccatctgctgttcccacacgatatcctctggtatcagtcaatgaggctccatatcgt
aacatgctaccagcaggcaacccgtggttgcaaatgcctacgatcgctgatagatcagct
gcccctcattccaggctagctcttcaaccatcaccactggacaaatatcaccctaattac
aactga

>gi568815574r:18671938_18873618|GENSCAN_predicted_peptide_6|389_aa
MENRQAPQTLLAESLLLLLKAETPTCPMSSRSGSKDHPHLPDLRPSFRAQGPPRNILDTC
FSNYVHQLLDLLLVESIGVTGSKSICVFSNVSSCLLRRSKLYHPCIAVRVALLLAESSYR
IFTNTWLTATIGRKIGMCTKIRKLEADMGDMPATLESCMKTDTQHSLSDNHNKETQRQSN
PLISTYKQSHWEVTAAQQSCCSQTAYLDSSSLVRASLKEWQQPQLGAYRQNFQLPETEPL
GERVAVEIGLAKEKNTKFESLETKLNEYKREIEKQLLAEMCQKGIFETNDSSPSQGLTNK
NPISLGQSTWGKRKPWMQLQQTSTSPPDGSEGAAHLPLQCTGSANGQSAFSSGSLTSVYP
DWETPPGRGRQTPCIGEHWLASDRCPLRI

>gi568815574r:18671938_18873618|GENSCAN_predicted_CDS_6|1170_bp
atggaaaacaggcaggcaccccaaacactgctggctgaaagcctgctgcttctgctgaag
gctgagactccaacctgtcccatgagtagccgcagtggctccaaagaccaccctcaccta
cccgacctccgcccttccttcagggcccaggggcccccaagaaacattctggacacatgc
ttcagcaactatgtccaccagctcctagatctgttactggtggaaagtatcggagttact
ggcagcaaatccatctgcgtctttagcaatgtcagttcttgcctcctcagacgcagtaaa
ttgtatcatccatgcatcgcagtcagggtagctttacttttagcagaatcttcatatagg
atattcaccaatacttggttaacagccactattggaagaaaaattggaatgtgcactaag
atacggaagctagaagcagacatgggggacatgcctgcaactctagaaagctgtatgaaa
acagacacacaacactctctgtcagataaccacaacaaagagacacagaggcagtccaac
cctctgataagcacttataaacaaagccactgggaagtcaccgcagctcagcaaagctgc
tgtagccagactgcctacctagattcctcctctttggtcagagcatctctgaaagaatgg
cagcagccccagttaggggcttatagacaaaatttccaactccctgaaacagagcccctg
ggggaaagggtggctgtagaaattggtttagcaaaagaaaagaatacaaagtttgagtct
ttagaaacaaagctaaatgaatataagagagaaatagaaaagcaacttctggcagaaatg
tgtcaaaagggtattttcgaaacaaatgatagcagccccagtcaggggcttacaaataaa
aaccccatctccctgggacagagcacctgggggaaaaggaagccatggatgcagcttcag
caaacttcaacatccccgcctgatggctctgaaggagcagcacacctcccattacagtgc
actggctctgctaatggtcagagtgccttctcaagtggatccctgacctctgtgtatcct
gactgggagacacctcctggcaggggccgacagacaccttgtattggagagcactggcta
gcatctgacagatgccccttgaggatatag

>gi568815574r:18671938_18873618|GENSCAN_predicted_peptide_7|46_aa
VEPLGGDEVMRVEPHEWDEHSYKKDSRELACSFHSVRTQREGSVYE

>gi568815574r:18671938_18873618|GENSCAN_predicted_CDS_7|141_bp
gtggagcctctgggaggtgatgaggtcatgagagtggagcctcatgaatgggatgagcac
tcctacaaaaaggattccagagagctcgcttgctccttccacagtgtgaggacacagagg
gaaggctctgtctatgaatga