GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:53:37

Sequence gi568815584f:96137108_96341501 : 204394 bp : 44.64% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   6575   6614   40                              -0.96
 1.01 Init +   7929   8064  136  2  1   87   92    27 0.704   3.31
 1.02 Term +  11411  11523  113  0  2   63   54    74 0.640   0.22
 1.03 PlyA +  13595  13600    6                               1.05

 2.03 PlyA -  13611  13606    6                               1.05
 2.02 Term -  14413  14259  155  2  2   71   53   104 0.061   3.28
 2.01 Init -  24285  24192   94  0  1   63   89    31 0.052   1.24
 2.00 Prom -  26774  26735   40                              -4.76

 3.00 Prom +  27250  27289   40                              -5.26
 3.01 Init +  36783  36841   59  2  2   76  116    43 0.979   6.93
 3.02 Intr +  37283  37382  100  2  1   47   81    74 0.960   2.71
 3.03 Intr +  38643  38957  315  2  0   64   97   124 0.865   7.16
 3.04 Intr +  41860  41973  114  0  0   78   80    28 0.613   1.64
 3.05 Intr +  46661  46809  149  1  2   72   51    96 0.017   3.33
 3.06 Intr +  52453  52598  146  1  2   56   53    81 0.005   1.33
 3.07 Intr +  70457  70613  157  0  1   46  115    95 0.049   7.07
 3.08 Intr +  77328  77446  119  0  2   56   85    19 0.024  -1.49
 3.09 Term +  79488  79759  272  1  2   35   47   258 0.802  12.05
 3.10 PlyA +  80377  80382    6                               1.05

 4.00 Prom +  83887  83926   40                              -4.66
 4.01 Sngl +  86001  86240  240  2  0   70   48   249 0.937  14.18
 4.02 PlyA +  87166  87171    6                               1.05

 5.00 Prom +  97245  97284   40                              -4.56
 5.01 Init +  97706  97752   47  1  2   85   40    73 0.031   2.36
 5.02 Intr + 103296 104393 1098  0  0  102   53  1931 0.003 180.05
 5.03 Intr + 108772 108824   53  1  2   -9   73   168 0.026   4.15
 5.04 Intr + 109325 109352   28  0  1   83   80    43 0.012   0.17
 5.05 Intr + 126566 127541  976  2  1  125   47   998 0.235  90.36
 5.06 Term + 132366 132527  162  2  0   69   38   106 0.158   1.64
 5.07 PlyA + 132787 132792    6                               1.05

 6.20 PlyA - 136890 136885    6                               1.05
 6.19 Term - 148878 148648  231  0  0  124   45   174 0.994  13.17
 6.18 Intr - 152741 152549  193  1  1   43   78   146 0.337   8.59
 6.17 Intr - 154991 154922   70  0  1  123   47    66 0.301   4.24
 6.16 Intr - 158453 158375   79  2  1   71   62    45 0.246  -0.68
 6.15 Intr - 165001 164900  102  1  0   79   72    56 0.868   3.47
 6.14 Intr - 166148 165954  195  2  0   65   95    48 0.738   2.81
 6.13 Intr - 168708 168559  150  0  0   55    5   183 0.623   7.06
 6.12 Intr - 169809 169607  203  1  2   68   90   114 0.998   8.60
 6.11 Intr - 172487 172346  142  2  1   56   95   134 0.996  10.83
 6.10 Intr - 174180 174010  171  0  0   80   87    43 0.803   3.54
 6.09 Intr - 180210 180038  173  1  2   53  100    45 0.806   1.86
 6.08 Intr - 180748 180591  158  0  2   97   45    65 0.860   2.75
 6.07 Intr - 185147 185005  143  2  2   63   95    54 0.973   2.75
 6.06 Intr - 185628 185433  196  2  1   46   98   110 0.941   7.22
 6.05 Intr - 186891 186789  103  1  1   51  113    75 0.936   5.53
 6.04 Intr - 188815 188542  274  1  1   74   91   148 0.993  10.81
 6.03 Intr - 191428 191240  189  1  0   90  119    19 0.866   4.98
 6.02 Intr - 191637 191567   71  1  2   45  110   -31 0.460  -6.30
 6.01 Intr - 196766 196581  186  0  0   75   91   133 0.795  11.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  77302  77446  145  0  1   71   85    49 0.811   3.18
S.002 Sngl + 103303 104397 1095  0  0   95   53  1903 0.913 184.50


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:96137108_96341501|GENSCAN_predicted_peptide_1|82_aa
MALVFFKSISCYQHGEELRITTLEEGSKEEETTSLWPNMRPPAPTATQWGYQALSLCWKM
SAESYDVTCLQVFQPWIPVPTL

>gi568815584f:96137108_96341501|GENSCAN_predicted_CDS_1|249_bp
atggcattggtattttttaaatctatcagctgctaccagcatggagaggagctgagaatc
actaccctagaagaaggtagcaaagaagaggaaactactagcctctggccaaacatgaga
ccccctgctcccacagccacccagtggggataccaggctctgagcttgtgctggaagatg
tctgcagagtcctatgatgtgacctgtcttcaggtcttccagccgtggataccagtgccc
actctgtga

>gi568815584f:96137108_96341501|GENSCAN_predicted_peptide_2|82_aa
MVEATTLMVSESPQNQTPPKQCRVTHLSGYPGQGQTPQRGFPGPPGSTPACFPSFTFTKQ
HDLSVHEGSLAKRHVVDKGGGQ

>gi568815584f:96137108_96341501|GENSCAN_predicted_CDS_2|249_bp
atggttgaggcaactacactgatggtctcagagtctccccagaatcagacacccccaaaa
cagtgccgtgtaacccatctcagtggatatccagggcaaggccaaactccacagcgcggc
tttccgggccctccgggatccactcctgcctgcttccccagcttcaccttcaccaagcag
catgatctaagtgtccacgaaggctcccttgccaagcgacacgtggtggacaagggggga
ggccagtga

>gi568815584f:96137108_96341501|GENSCAN_predicted_peptide_3|476_aa
MGQRPLQAQGSWWRLGSGERGLLGEKEDPAEETDRQRLVRQEAWRGKSFRKDKTLANASL
MAATKFAPEIEALTHWCARAPHGMRQKLGSNQTTCLAFSTCCILLPLPPFSWEYSPVNHL
SKNPTSGSALRSMNFHVPRTMMGVVVEKEPVNPVLTISMLSNTNDKSKQVVCLQSSRPAP
KLQLGETHRALDPPVQLEPGHGSDPTLITEMTKVTWRIMECHHPDKLNGSLQDCYVRARD
CKPVLTLGSQAGFSGRSDTSAKVARGPSWGRPIVSALANVEVLEGQGGADGHRTKCPSPR
VNPDENYGLWVMMMCQRRFINYNKLTALVGDVSNGGGYVCVGTGDICPPAGDNAPYPTSG
DLGSDRRPHTYSPSLSDRQSWDLNTPAWATEQDPVSTKEKEERRGRKKEEKRKKKEEEEE
GGGRRRKRKEEEEGGGGGRRRRRRKEEEEEEEEVGEEEGGGGGGDPTALFGRLWEN

>gi568815584f:96137108_96341501|GENSCAN_predicted_CDS_3|1431_bp
atgggtcagcggccgctgcaggcccaggggagctggtggcgcctgggctcaggggaaagg
ggtcttcttggcgagaaggaagatccagcagaggagacagacaggcagcggctcgtgagg
caggaagcctggagagggaagagcttccggaaagacaagaccttggccaatgccagcctc
atggctgccacaaagtttgccccggagatagaggcactaactcattggtgcgccagagcc
ccccatgggatgaggcagaagctgggctccaaccagaccacctgcttagctttttccacc
tgctgtatcctgcttcctttgccccccttttcatgggagtactccccagtaaatcatctg
agcaagaatccaacctcaggctccgctttaagatctatgaattttcatgtgccaagaacc
atgatgggggtggtggtggagaaagagccagtgaatccagtactaacaatatcgatgctg
agcaacacaaatgataaatccaagcaagttgtttgcctgcagagttcccggcctgctcca
aagttgcagctgggggaaacccacagggctctagacccacccgtgcagctggaacctgga
catggcagtgacccaactctaatcacagaaatgaccaaggtgacctggagaataatggag
tgccaccaccctgacaagctgaatggctcgctccaggactgttacgtgagagcgagagat
tgcaagccagtcctcacattgggcagtcaggcaggcttctctgggagaagtgacacttca
gccaaagtggccaggggaccgagctgggggaggcccatcgtcagtgccctagcgaatgtg
gaagtgctcgagggacagggaggggccgacggccatcgcaccaaatgtccatcaccaaga
gtgaaccctgatgaaaactatggactttgggtgatgatgatgtgtcaacgcaggttcatc
aattacaacaaattgactgctcttgtgggggatgtcagtaacgggggaggctacgtatgt
gtaggcacaggggatatatgccctcctgccggggacaatgctccttatcccacaagcggg
gacctgggctctgacaggaggccacacacttacagtccctcccttagtgaccggcagagc
tgggatttgaacacccctgcctgggcaacagagcaagatcctgtttcaacaaaagaaaaa
gaagagagaagaggaagaaagaaggaggagaagaggaagaagaaggaggaggaggaggaa
ggaggaggaaggaggaggaagaggaaggaggaggaggaaggaggaggaggaggaaggagg
aggaggaggaggaaggaggaggaggaggaggaggaggaagtaggagaagaagaaggagga
ggaggaggaggagatcctacagcactgtttggaagattatgggaaaattag

>gi568815584f:96137108_96341501|GENSCAN_predicted_peptide_4|79_aa
MSHKQIHYSDRYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHNMIH
ESEPHILLFRRPPPKKPKK

>gi568815584f:96137108_96341501|GENSCAN_predicted_CDS_4|240_bp
atgtcacacaaacaaattcactattcggacagatacgacgacgaggagtttgagtatcga
catgtcatgctgcccaaggacatagccaagctggtccctaaaacccatttgatgtctgaa
tctgaatggaggaatcttggcgttcagcagagtcagggatgggtccataatatgatccat
gaatcagaacctcacatcttgctgttccggcgcccaccacccaagaagccaaagaaatga

>gi568815584f:96137108_96341501|GENSCAN_predicted_peptide_5|787_aa
MEASEETLDTSPMTELADMLNVTLQGPTLNGTFAQSKCPQVEWLGWLNTIQPPFLWVLFV
LATLENIFVLSVFCLHKSSCTVAEIYLGNLAAADLILACGLPFWAITISNNFDWLFGETL
CRVVNAIISMNLYSSICFLMLVSIDRYLALVKTMSMGRMRGVRWAKLYSLVIWGCTLLLS
SPMLVFRTMKEYSDEGHNVTACVISYPSLIWEVFTNMLLNVVGFLLPLSVITFCTMQIMQ
VLRNNEMQKFKEIQTERRATVLVLVVLLLFIICWLPFQISTFLDTLHRLGILSSCQDERI
IDVITQIASFMAYSNSCLNPLVYVIVGKRFRKKSWEVYQGVCQKGGCRSEPIQMENSMGT
LRTSISVERQIHKLQDWAGSRHFDDDDDDDDDDDGGGVGTSWRNEKKSRSLCMASSWPPL
ELQSSNQSQLFPQNATACDNAPEAWDLLHRVLPTFIISICFFGLLGNLFVLLVFLLPRRQ
LNVAEIYLANLAASDLVFVLGLPFWAENIWNQFNWPFGALLCRVINGVIKANLFISIFLV
VAISQDRYRVLVHPMASRRQQRRRQARVTCVLIWVVGGLLSIPTFLLRSIQAVPDLNITA
CILLLPHEAWHFARIVELNILGFLLPLAAIVFFNYHILASLRTREEVSRTRCGGRKDSKT
TALILTLVVAFLVCWAPYHFFAFLEFLFQVQAVRGCFWEDFIDLGLQLANFFAFTNSSLN
PVIYVFVGRLFRTKLRPLPKKGLTAGLQSAQCSRSEVQVSESHMPLFQSSLHHRMGLADH
RNSASHL

>gi568815584f:96137108_96341501|GENSCAN_predicted_CDS_5|2364_bp
atggaggccagcgaggaaacgctggacacgtcccccatgactgagctcgccgacatgctc
aatgtcaccttgcaagggcccactcttaacgggacctttgcccagagcaaatgcccccaa
gtggagtggctgggctggctcaacaccatccagccccccttcctctgggtgctgttcgtg
ctggccaccctagagaacatctttgtcctcagcgtcttctgcctgcacaagagcagctgc
acggtggcagagatctacctggggaacctggccgcagcagacctgatcctggcctgcggg
ctgcccttctgggccatcaccatctccaacaacttcgactggctctttggggagacgctc
tgccgcgtggtgaatgccattatctccatgaacctgtacagcagcatctgtttcctgatg
ctggtgagcatcgaccgctacctggccctggtgaaaaccatgtccatgggccggatgcgc
ggcgtgcgctgggccaagctctacagcttggtgatctgggggtgtacgctgctcctgagc
tcacccatgctggtgttccggaccatgaaggagtacagcgatgagggccacaacgtcacc
gcttgtgtcatcagctacccatccctcatctgggaagtgttcaccaacatgctcctgaat
gtcgtgggcttcctgctgcccctgagtgtcatcaccttctgcacgatgcagatcatgcag
gtgctgcggaacaacgagatgcagaagttcaaggagatccagacagagaggagggccacg
gtgctagtcctggttgtgctgctgctattcatcatctgctggctgcccttccagatcagc
accttcctggatacgctgcatcgcctcggcatcctctccagctgccaggacgagcgcatc
atcgatgtaatcacacagatcgcctccttcatggcctacagcaacagctgcctcaaccca
ctggtgtacgtgatcgtgggcaagcgcttccgaaagaagtcttgggaggtgtaccaggga
gtgtgccagaaagggggctgcaggtcagaacccattcagatggagaactccatgggcaca
ctgcggacctccatctccgtggaacgccagattcacaaactgcaggactgggcagggagc
agacactttgatgatgatgatgatgatgatgatgatgatgatggtggtggtgttggcaca
agctggcgcaatgagaagaagtccaggtcactgtgcatggcatcatcctggccccctcta
gagctccaatcctccaaccagagccagctcttccctcaaaatgctacggcctgtgacaat
gctccagaagcctgggacctgctgcacagagtgctgccaacatttatcatctccatctgt
ttcttcggcctcctagggaacctttttgtcctgttggtcttcctcctgccccggcggcaa
ctgaacgtggcagaaatctacctggccaacctggcagcctctgatctggtgtttgtcttg
ggcttgcccttctgggcagagaatatctggaaccagtttaactggcctttcggagccctc
ctctgccgtgtcatcaacggggtcatcaaggccaatttgttcatcagcatcttcctggtg
gtggccatcagccaggaccgctaccgcgtgctggtgcaccctatggccagccggaggcag
cagcggcggaggcaggcccgggtcacctgcgtgctcatctgggttgtggggggcctcttg
agcatccccacattcctgctgcgatccatccaagccgtcccagatctgaacatcaccgcc
tgcatcctgctcctcccccatgaggcctggcactttgcaaggattgtggagttaaatatt
ctgggtttcctcctaccactggctgcgatcgtcttcttcaactaccacatcctggcctcc
ctgcgaacgcgggaggaggtcagcaggacaaggtgcgggggccgcaaggatagcaagacc
acagcgctgatcctcacgctcgtggttgccttcctggtctgctgggccccttaccacttc
tttgccttcctggaattcttattccaggtgcaagcagtccgaggctgcttttgggaggac
ttcattgacctgggcctgcaattggccaacttctttgccttcactaacagctccctgaat
ccagtaatttatgtctttgtgggccggctcttcaggaccaagctcaggcccctgcccaag
aagggcctcaccgcggggctgcagagtgcacagtgcagccggtcagaggtccaggtctct
gagtcacacatgccactgttccagtcctcactccaccaccgcatgggcctggccgaccac
cgaaactcggcatcccatctgtaa

>gi568815584f:96137108_96341501|GENSCAN_predicted_peptide_6|1009_aa
XNSSKIGLANKDRKNRPMQQEDEYRIQMELNRYYLRKDSLSVGVSSEQSFYETETARTPS
SREETGSHSPVCLQLHYKHSENRGPQGNQARLSSVPHKAELQIKLNPVCCELDISIVDRL
NSLLQPQKLATVEMMASHMYTSYNKHISLHKAFTEVFLDDSHSPANCRISVQVATPALNL
SVRFPIPDLRSDQERGPWFKKSLQKEILYLAFTDLEFKTEFIGGSTPEQIKLELTFRELI
GSFQEEKGDPSIKFFHVSSGVDGDTTSSDDFDWPRIVLKINPPAMHSILERIAAEEEEEN
DGHYQEEEEGGAHSLKDVCDLRRPAPSPFSSRRVMFENEQMVMPGDPVEMTEFQDKAISN
SHYVLELTLPNIYVTLPNKSFYEKLYNRIFNDLLLWEPTAPSPVETFENISYGIGLSVAS
QLINTFNKDSFSAFKSAVHYDEESGSEEETLQYFSTVDPNYRSRRKKKLDSQNKNSQSFL
SVLLNINHGLIAVFTDVKTEPRFELHCSSDVVHIRTCSDSCAALMNLIQYIASYGDLQTP
NKADMKPGAFQRRSKVDSSGRSSSRGPVLPEADQQMLRDLMSDAMEEIDMQQGTSSVKPQ
ANGVLDEKSQIQEPCCSDLFLFPDESGNVSQESGPTYASFSHHFISDAMTGVPTENDDFC
ILFAPKAAMQEKEEEPVIKIMVDDAIVIRDNYFSLPVNKTDTSKAPLHFPIPVIRYVVKE
VKFQHEVYPPCKPDCDSSLSEHPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRK
AHSNMLTVKALHVCPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSAEVELQM
TPDPEENLDSRQKFPFDLIIMANMYQWIRLSSNSFLPFDKMIQAAAETAYDMVSPGTLSI
EPKKTKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHESRGVTGAVG
EVLRQIPPAVVKPLIVATEATSNVLGGMRNQIRPDVRQDESQKWRHGDD

>gi568815584f:96137108_96341501|GENSCAN_predicted_CDS_6|3030_bp
naaaattctagcaaaatagggttagctaataaagataggaaaaatcgacccatgcagcag
gaagacgagtatcgaattcagatggaattaaaccggtattatttgagaaaagattccctc
tctgtgggtgtatcttcagagcaaagcttttatgagacagaaacagctcgtacaccttct
agccgtgaagaaactggttcccattcccctgtgtgtcttcagcttcattataagcattct
gagaatagagggccccagggtaatcaagcaagacttagttcagttcctcacaaggcagaa
ttgcaaattaaattaaatccagtgtgttgtgagctggatatcagtattgtggacaggtta
aattccttgcttcaaccacagaaacttgccacagtagagatgatggcatcccacatgtat
acttcatataataaacatattagtctgcacaaggctttcactgaagtgtttctagatgat
tcacatagtcctgcaaattgtcggatatcagtacaagttgccacaccagcattaaacctt
tctgttcgcttcccaatacctgatcttcgatctgatcaagaaagaggaccatggtttaag
aagtcacttcagaaggagatcctttatttagccttcacagatctagaatttaagactgaa
tttataggaggatcaaccccagaacaaattaaattggaacttacctttagagaactaatt
ggatcgttccaggaagagaaaggagatccatctattaagtttttccatgtgtctagtgga
gtagatggagatacaacatcgtcagatgactttgactggccacgaattgtactgaaaata
aatccaccagccatgcattccattttggagagaattgcagctgaagaagaagaggagaat
gatggtcactaccaggaggaagaggaaggaggtgctcattccttgaaagatgtttgtgat
ctaagaagaccagccccatctcctttttcttctcgtagagtaatgtttgaaaatgaacag
atggtgatgccaggagaccctgtagaaatgacagaatttcaggataaagcaatcagcaat
tctcactatgtgctggaacttacgttaccaaatatttatgtaacactacctaataagagc
ttttatgagaagctttataataggatctttaatgacttgctactgtgggaaccaacagct
ccttcaccagtggagacattcgagaatatttcctatggcattgggctttcagtagccagt
cagctcattaatactttcaacaaagatagttttagtgcatttaaatctgcagttcactat
gatgaggaaagtggatctgaggaggagactttgcagtatttttccactgttgatcccaac
tatcgttctcgcaggaaaaaaaaattagactctcagaacaagaactctcagagttttctc
tcagttcttctgaatattaatcatggattaatagcagtgttcacagatgtgaagactgag
ccccgctttgagttacactgttccagcgatgttgtccatatcagaacgtgctcagactct
tgtgctgcgttaatgaatctcattcagtacattgcaagctatggtgacttgcagacacct
aacaaggcagatatgaagcctggagcctttcaaagaaggtctaaggtagattccagtggt
cgatcatcctcacgtggtccagtacttcctgaagcagatcaacaaatgttacgagatctg
atgagtgatgctatggaggagatcgacatgcaacaaggcacctcgtcagtaaaaccacag
gctaatggtgttttggatgaaaaatctcaaattcaggagccatgttgttcagacctcttc
ctgtttcctgacgagagtgggaatgtatcccaggagtccggccccacctatgcctcattc
tctcaccatttcatcagtgatgcaatgacaggtgtgcccactgagaatgatgacttttgc
attctttttgcaccaaaagcagccatgcaggagaaggaagaagaaccagttataaaaatc
atggttgatgatgcaattgtgataagagacaattatttcagtctgcccgttaataagacc
gatacgagcaaagcccccttacactttcccattcctgtgattcgctatgtggtgaaggag
gtgaagtttcagcatgaagtctacccgccatgcaaacctgattgtgattccagcctctca
gaacacccagtctcccggcaggtgttcattgttcaggatcttgagattcgagatcgtttg
gcaacatcacaaatgaataaatttttatacctgtattgcagtaaagaaatgcctcgaaaa
gctcactccaacatgttgacagtgaaagccttacacgtgtgtccagaatctggcaggtcc
ccacaggagtgctgcttgagagtgtcgctgatgccgctccgcctcaatattgaccaggat
gctttgttcttcctgaaggatttcttcacaagtctttctgcagaagtagagcttcaaatg
actccagatccagaagagaatttagattcacgtcagaagttcccattcgacttgattatc
atggcaaacatgtatcaatggatcagactttcttctaattcatttcttccttttgacaaa
atgatccaggcagctgcagagactgcttatgatatggtgtctcctggtaccctttctatc
gagcccaagaagaccaaaaggtttcctcatcaccggttagcccaccagccagtagacctg
agggaaggtgtggccaaggcctacagtgttgtgaaagagggaatcacagacacggctcag
accatttatgaaactgcggctcgagaacacgagagcagaggggtgactggtgccgtgggc
gaggttctgcgccagattcctccggcagtggtgaaacctctgattgttgccacagaagca
acgtcaaacgtgctgggtggcatgagaaaccaaattaggccagatgtccggcaagacgag
tcacagaaatggcgccacggggatgactga