GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:50:36

Sequence gi568815593f:170005958_170208608 : 202651 bp : 45.57% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1759   1790   32  2  2  123   88     0 0.698   1.35
 1.02 Intr +   2540   2640  101  1  2  129   47   104 0.963   9.31
 1.03 Intr +   2731   2789   59  1  2   75   97    56 0.936   3.73
 1.04 Intr +  13003  13151  149  2  2  131   93    71 0.568  11.85
 1.05 Intr +  20059  20313  255  0  0   80   15   121 0.559   1.64
 1.06 Intr +  21906  21991   86  2  2   72  101   146 0.916  12.92
 1.07 Intr +  28442  28598  157  2  1  111   78   300 0.982  31.31
 1.08 Intr +  30558  30598   41  2  2   95  116    55 0.973   6.02
 1.09 Intr +  35098  35188   91  1  1   77   87    41 0.973   2.90
 1.10 Intr +  36056  36175  120  1  0  119   84   216 0.999  24.99
 1.11 Intr +  39859  39948   90  0  0   79   95   188 0.999  18.79
 1.12 Intr +  41553  41657  105  2  0   92  100   111 0.994  13.11
 1.13 Intr +  44299  44438  140  0  2  105  -59   249 0.536  11.16
 1.14 Intr +  50727  50811   85  0  1   85   68   128 0.973  10.32
 1.15 Intr +  51623  51709   87  1  0   58  109   124 0.999  11.67
 1.16 Intr +  52529  52696  168  1  0   -1   96    91 0.623   1.14
 1.17 Intr +  61553  61729  177  1  0   69  100   317 0.780  31.12
 1.18 Intr +  63180  63263   84  2  0  134   94   113 0.999  16.52
 1.19 Intr +  69990  70127  138  2  0  117   56   173 0.996  17.66
 1.20 Intr +  71753  71880  128  1  2  107   78    90 0.999   9.38
 1.21 Intr +  73018  73189  172  1  1   72  100   203 0.999  19.85
 1.22 Intr +  74206  74326  121  0  1   65   85   126 0.999  10.07
 1.23 Intr +  75885  76027  143  1  2   87   77   138 0.905  12.67
 1.24 Intr +  76839  76897   59  2  2   32   50   120 0.936   0.28
 1.25 Intr +  78457  78607  151  1  1   60  113    82 0.940   8.06
 1.26 Intr +  79815  79878   64  2  1   59   89    52 0.618   0.69
 1.27 Intr +  85151  85259  109  0  1   52   78    67 0.252   1.44
 1.28 Term +  89742  89895  154  0  1   86   48    91 0.646   2.29
 1.29 PlyA +  93894  93899    6                               1.05

 2.00 Prom +  93912  93951   40                              -8.16
 2.01 Init + 100001 100574  574  1  1   84   90  1058 0.984 100.88
 2.02 Term + 102092 102654  563  0  2   75   43   420 0.991  30.74
 2.03 PlyA + 103753 103758    6                              -0.45

 3.00 Prom + 104357 104396   40                             -12.40
 3.01 Init + 104589 104667   79  2  1   79   95   231 0.887  24.12
 3.02 Intr + 112544 112616   73  0  1   78   80    34 0.022   0.06
 3.03 Intr + 118521 118590   70  0  1   73   94    38 0.024   2.08
 3.04 Term + 130331 130366   36  1  0  114   48     1 0.080  -3.96
 3.05 PlyA + 131102 131107    6                               1.05

 4.03 PlyA - 131430 131425    6                               1.05
 4.02 Term - 135992 135175  818  0  2   91   34  1199 0.983 108.10
 4.01 Init - 148111 147913  199  1  1   70   76    96 0.197   3.75
 4.00 Prom - 162372 162333   40                              -4.76

 5.00 Prom + 171856 171895   40                              -2.26
 5.01 Init + 182604 182735  132  2  0   84   83    70 0.877   6.18
 5.02 Intr + 183432 183545  114  2  0  105   84    48 0.936   6.74
 5.03 Intr + 186778 186815   38  0  2   60  119    11 0.377  -1.54
 5.04 Intr + 189915 190104  190  0  1   60  -10   148 0.542   1.79
 5.05 Intr + 190799 190917  119  1  2   81  100    63 0.907   6.06
 5.06 Intr + 191007 191025   19  0  1   84   98     5 0.457  -2.29
 5.07 Intr + 192847 192959  113  0  2   81   85    45 0.542   2.68
 5.08 Term + 194560 194665  106  1  1   89   48    50 0.524  -1.02
 5.09 PlyA + 196524 196529    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:170005958_170208608|GENSCAN_predicted_peptide_1|1088_aa
XWWSGLAPTDQLWNNYFHLAVAFITQDSLQLEQFSHAKYNKILNKYGDMRRLIGFSIRDM
WYKLGQNKICFIPGMVGPILEMTLIPEAELRKATIPIFFDMMLCEYQRSGDFKKARYISF
NKSSPTEATHRKFFGICAVSAQAFGPSLRSFVHKSEGTMASRMMCEPEGRANVVPAFSSP
KDSNSMELYPLCPGKSLPKFENEIILKLDHEVEGGRGDEQYMQLLESILMECAAEHPTIA
KSVENFVNLVKGLLEKLLDYRGVMTDESKDNRMSCTVNLLNFYKDNNREEMYIRYLYKLR
DLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYF
DKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIMKILRPKPDYFAVGYY
GQGFPSFLRNKVFIYRGKEYERREDFQMQLMTQFPNAEKMNTTSAPGDDVKNAPGHFYKS
NYVQRFHYSRPVRRGTVDPENEFASMWIERTSFVTAYKLPGILRWFEVVHMSQGSQRMLP
SILAVEERPGGNEEGVHADIEERDIPAEETASEKPWAQSMLVSRSEQVRTTISPLENAIE
TMSTANEKILMMINQYQSDETLPINPLSMLLNGIVDPAVMGGFAKYEKAFFTEEYVRDHP
EDQDKLTHLKDLIAWQIPFLGAGIKIHEKRVSDNLRPFHDRMEECFKNLKMKVEKEYGVR
EMPDFDDRRVGRPRSMLRSYRQMSIISLASMNSDCSTPSKPTSESFDLELASPKTPRVEQ
EEPISPGSTLPEVKLRRSKKRTKRSSVVFADEKAAAESDLKRLSRKHEFMSDTNLSEHAA
IPLKASVLSQMSFASQSMPTIPALALSVAGIPGLDEANTSPRLSQTFLQLSDGDKKTLTR
KKVNQFFKTMLASKSAEEGKQIPDSLSTDLLSLVASMSLLQAPFEDVLPSSASSFLNSLK
SPVAMIVGVWATTNTFGFPKLSDLSNGCDQQDPIWNPGLLPAVFISAILVSDLDKTGFHS
ELPTVMGLTAQVNKQMHKKHPEIPADINEDISFQKNLQFLQRCNQITVTFGKACDLSKPN
FLICEKGQ

>gi568815593f:170005958_170208608|GENSCAN_predicted_CDS_1|3267_bp
ngctggtggagtgggttagcaccaacagatcagctgtggaacaactattttcatctggca
gtggcttttatcacccaggattctctgcagctggagcagttctcacacgccaaatacaac
aaaatcctgaataagtatggggacatgagacggctaattggcttctccatccgtgatatg
tggtacaagcttggtcagaacaaaatctgcttcatcccaggcatggtaggacctatatta
gagatgacacttatccctgaggctgagctccggaaagccaccataccaatcttcttcgac
atgatgctgtgtgaatatcaaagaagtggggatttcaaaaaggcccggtatatctccttc
aataagtcttccccaactgaggcaactcaccggaaattctttggcatttgtgctgtatca
gcacaagcttttggtccctcccttagatcctttgtgcacaaaagtgagggaacgatggca
tcacggatgatgtgtgaaccagagggaagagcaaatgtggtccctgccttttcatcacct
aaagattccaactccatggagctctatcctttatgcccaggaaagagcctgccaaagttt
gaaaacgaaatcatcctgaagctggaccacgaggtagaagggggccgaggcgacgagcag
tacatgcagctcctggagtcaatcctgatggaatgtgctgcagagcacccaaccattgcc
aagtcggtggagaacttcgtgaacctggtcaaaggcctcctggagaagctgctggattac
cggggtgtgatgacagatgagagcaaagacaaccgcatgagctgcaccgtgaacctgctg
aatttctacaaagataacaacagggaggagatgtacataaggtacctgtacaaactccgc
gatcttcacctggactgtgacaattacacagaggctgcctacacgctccttctccacacc
tggcttctcaagtggtcggatgagcagtgtgcatcacaggtcatgcagacaggccagcag
cacccccagacacaccggcagctgaaggagacgctctacgagaccatcataggctacttt
gacaaaggaaagatgtgggaagaggccataagtctgtgcaaggagctggcggaacagtac
gagatggagatctttgactatgagctgctcagccagaacctgatccagcaggcaaaattc
tatgaaagcatcatgaaaatcctcaggcccaaaccagactactttgctgttggatactac
ggccagggattcccctccttcctgcggaacaaagtgttcatctaccgcgggaaggaatat
gagcgaagagaagatttccagatgcagctgatgacccagttccccaatgcagagaagatg
aacaccacctctgccccgggagatgatgtgaagaatgccccaggccacttctacaaatcc
aactacgtgcaaaggttccactactcccggcccgtgcgcagggggaccgtagacccagag
aatgagtttgcttccatgtggattgagagaacctccttcgtgactgcatacaagctgccg
gggatcctgcgctggtttgaggtggtgcacatgtcgcagggtagtcagagaatgcttccc
tctatactggctgttgaggagaggcctggaggaaatgaggaaggggtccatgctgacatt
gaagagagagacattccagcagaggagacagcaagtgaaaagccctgggcccagagtatg
cttgtgtccagatcagaacaagtgaggaccacaattagtcctctggagaatgccatagaa
accatgtccacggccaatgagaagatcctgatgatgataaaccagtaccagagtgatgag
accctccccatcaacccactctccatgctcctgaacgggattgtggaccctgctgtcatg
ggaggcttcgccaagtatgagaaggccttcttcactgaagagtatgtcagggaccaccct
gaggaccaggacaagctgacccacctcaaggacctgattgcatggcagatccccttcttg
ggagctgggattaagatccatgagaaaagggtgtcagataacttgcgacccttccatgac
cggatggaggaatgtttcaagaacctgaaaatgaaggtggagaaggagtacggtgtccga
gagatgcctgactttgacgacaggagagtgggccgtcccaggtctatgctgcgctcatac
agacagatgtccatcatctctctggcttccatgaattctgactgcagcacccccagcaag
cctacctcagagagctttgacctggaattagcatcacccaagacgccgagagtggagcag
gaggaaccgatctccccggggagcaccctgcctgaggtcaagctgcggaggtccaagaag
aggacaaagagaagcagcgtagtttttgcggatgagaaagcagctgcagagtcggacctg
aagcggctttccaggaagcatgagttcatgagtgacaccaacctctcggagcatgcggcc
atccccctcaaggcgtctgtcctctctcaaatgagctttgccagccagtccatgcctacc
atcccagccctggcgctctcagtggcaggcatccctgggttggatgaggccaacacatct
ccccgcctcagccagaccttcctccaactctcagatggtgacaagaagacactcacacgg
aagaaggtcaatcagttcttcaagacaatgctggccagcaaatcggctgaagaaggcaaa
cagatcccagactcgctgtccacggacctcctgtccctggtggcctctatgtccctgctg
caagccccatttgaagacgtgttgcctagttcagcttctagtttcctcaacagtctaaaa
agtcctgttgcgatgattgttggggtttgggctacaacaaacacctttgggttccctaag
ttaagtgatctctccaatggctgtgatcagcaggacccaatctggaatccaggtcttctt
ccagctgtgtttatctctgcaattcttgtgtctgatcttgacaaaacaggcttccactca
gaacttcctactgtaatgggtctaactgcccaggtcaacaaacagatgcataagaagcac
ccagaaatccctgcagacattaatgaggacatatcattccagaagaatctccagttcctg
cagagatgtaatcagataactgtgacctttggaaaagcatgtgacctctctaagcccaat
ttcctcatatgcgaaaaaggacaatga

>gi568815593f:170005958_170208608|GENSCAN_predicted_peptide_2|378_aa
MSSFDLPAPSPPRCSPQFPSIGQEPPEMNLYYENFFHPQGVPSPQRPSFEGGGEYGATPN
PYLWFNGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIPSQEELMK
LVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDC
FKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDVSSSTASLALEKTESSLPV
DSPKTTEPQDILDGASPGGTTSSPEKRPSPPPSGAPCLNSFLSSMTAYVSGGSPTSHPLV
TPGLSPEPSDKTGQNSLTFNSFSPLTNLSNHSGGGDWANPMPTNMLSYGGSVLSQFSPHF
YNSVNTSGVLYPREGTEV

>gi568815593f:170005958_170208608|GENSCAN_predicted_CDS_2|1137_bp
atgagctccttcgacctgccggcgccctccccacctcgctgcagcccccagttccccagc
atcggccaggagccccccgagatgaacctctactatgagaacttcttccacccacagggc
gtgcccagccctcagcggccctccttcgaggggggcggcgagtatggggccacccccaac
ccctacctctggttcaacgggcccaccatgaccccgccaccctacctgcccggccccaac
gccagccccttcctgccccaggcctatggagtgcagaggccgctgctgcccagcgtgtcg
gggcttggggggagcgacctgggctggctgcccatcccctcgcaggaggagctgatgaag
ctggtgcggccaccctattcctactcggctctcatcgccatggccatccacggggcaccc
gacaagcgcctcactctcagccagatctaccagtacgtggccgacaacttccccttctac
aacaagagcaaggccggctggcagaactccatccgccacaacctgtcgctcaacgactgc
ttcaagaaggtgccccgcgacgaggacgacccgggcaaagggaattactggaccctggac
cccaactgtgagaaaatgttcgacaatggaaatttccgcaggaaaaggaagagaaaatca
gatgtttcctctagcacagcctccttggccttagagaagacagagagcagtctcccggtg
gacagccccaagaccacggagcctcaggacatcttggatggagcctcaccagggggcacc
accagctccccagagaagcggccctcccctcccccatcaggcgccccttgccttaacagc
ttcctttcctctatgacagcctatgtgagcggggggagccccacgagccaccccttggtc
acaccaggactgagccctgagcccagtgacaagacggggcagaactcactgaccttcaac
tccttctccccgctcaccaacctcagcaaccacagcggtgggggtgactgggcgaacccc
atgcccaccaacatgctcagctatggaggatctgtgctcagccaattcagccctcacttc
tacaacagtgtcaacaccagtggtgtcctctaccccagggagggcaccgaggtctag

>gi568815593f:170005958_170208608|GENSCAN_predicted_peptide_3|85_aa
MAMIIDDDDDDDDDNDGDDDVDGDDDVRDQPNLFNNRGVPSSPWLEDVDNRAAERLAFWK
ELVDQHLWEMLLTEMRKCRLKDQAT

>gi568815593f:170005958_170208608|GENSCAN_predicted_CDS_3|258_bp
atggcaatgattattgatgatgatgatgatgatgatgatgataatgatggtgatgatgat
gttgatggtgatgatgatgtgagggaccaacccaacttgtttaacaacaggggtgtccca
agtagcccttggctggaggacgttgataatagggctgctgagagacttgcattctggaag
gagttggttgaccagcacctatgggagatgctgctgacagagatgaggaagtgcaggctg
aaagatcaagccacttaa

>gi568815593f:170005958_170208608|GENSCAN_predicted_peptide_4|338_aa
MALTRSSAVLGKAEVAAAPEFGIQGLFQLSFLTAFPVIPISHTLGNMSPSAKDSAPLLPA
FALLIPYSTRFTTRFTFSTNYQSLGSVQPPSYGVQLVSSAASVYAGAGGSGSRISMSRST
NFQGCLGSGGLAAGLAGGLERMGGIHKEKETMQSLNDCLASYLDRVRSQETENQKLENKI
WEHLEKKGPQVRDWGHYFKTIEELRTQIFANTVDNARIVLQINNARLAADDFRVKYETGL
AMRQSVESEIHGLCKVTDDTNVTRLQLETEIEALKEELLFMKKNHKEEVKGLQAQIASSG
LTMEVDAPKSQNLTKIMADIRAQYKELARKNQEELDKY

>gi568815593f:170005958_170208608|GENSCAN_predicted_CDS_4|1017_bp
atggcactgacacggtcctccgcagtcctggggaaggctgaggtagctgctgcgcctgaa
tttggcattcaaggccttttccagcttagttttctgactgcctttccagttatccccata
tcccacactcttgggaacatgtcaccttctgccaaagattctgccccgctcctccctgcc
tttgcgcttcttattccctacagcacgagattcaccactcgcttcaccttctccaccaac
taccagtccctaggctccgttcagcctcccagctatggtgtccagctggtcagcagcgca
gccagcgtctatgcaggcgctgggggctcgggctcccggatctctatgtcccgctccacc
aacttccaaggctgcttggggtctgggggcctggctgcggggctggccgggggtctggag
agaatgggaggcatccacaaggagaaggagaccatgcaaagcctgaacgactgcctggcc
tcctacctggacagagtgaggagccaggagaccgagaaccagaagctggaaaacaaaatc
tgggagcacctggagaagaagggaccccaggtcagagactggggccattacttcaagacc
atcgaggaactgaggactcagatctttgcaaatactgtggacaatgcccgcattgttctg
cagatcaacaatgcccgtcttgctgctgatgactttagagtcaagtatgagacagggctg
gccatgcgccagtctgtggagagcgaaatccatgggctctgcaaagtcactgatgacaca
aatgtcactcggctgcagctggagacagagatcgaagctctcaaggaggagctgctcttc
atgaagaaaaaccacaaagaggaagtaaaaggcctacaagcccagattgccagctctggg
ttgaccatggaggtagatgcccccaaatctcagaacctcaccaagatcatggcagacatc
cgggcccaatacaaggagctggctcggaagaaccaagaggagctggacaagtactag

>gi568815593f:170005958_170208608|GENSCAN_predicted_peptide_5|276_aa
MTWAVRAAFAKGLWLKGILSGPLKGAMRIEKKEGRVVEGDASPEIHRETTHYGLEDPTQV
PASLEAFSAYLTPLATTSYLPQRPTTLLGAVNVPWTPVMLRADGIDPDFAAMKSPQESPT
SGVLSLQTVIRDILVWETAALHPDFTAGETGPGEETHLVRKLKLKKATAHTGSEGSRKIG
NQLCSQCLCPLCSNTAFQSSYAVKFSAHHIGQRALARVEASADHFPDNLAGRDGTVCSTG
KSSLGQGMSRMFEKMVQKGAFGNPQGFCTQDGLEGS

>gi568815593f:170005958_170208608|GENSCAN_predicted_CDS_5|831_bp
atgacttgggccgtgagagcagcatttgctaagggcctgtggctgaaagggatcctgtca
ggaccattgaaaggagcaatgaggatagagaagaaggaggggagggtggtggaaggggat
gcctctccggagatccaccgggaaaccactcactatggccttgaagacccaactcaagta
cctgcttctttagaagccttttctgcctacctcaccccattagctactacctcatacctg
cctcagaggccgacaacactcctgggggcggtgaatgtgccctggacccctgtcatgcta
cgagcagatggcatcgatcctgactttgctgccatgaaatcccctcaagagagccccaca
tcaggggtcctgagtttgcagacagtcattagagacatccttgtttgggaaacagctgcc
ctccaccctgatttcacagctggggaaacagggcctggagaggagactcatctggtgaga
aaactaaagctcaagaaggccacggcacacacaggcagcgagggcagcaggaagattgga
aatcagctctgctcccaatgcctgtgcccactctgttccaacacagccttccaaagctca
tacgctgtgaagttttctgcccatcacattggccaaagagctctagccagagttgaagcc
agtgctgatcactttcctgacaacctggctggcagagatgggaccgtatgtagcacaggg
aagagctcacttggacagggaatgtcccgcatgtttgaaaagatggttcagaaaggagcc
tttggcaatccccagggtttctgcacccaagatggactggagggatcatga