GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:49:20

Sequence gi568815593r:76517585_76723230 : 205646 bp : 40.05% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +     41     80   40                              -3.55
 1.01 Init +   2039   2075   37  1  1   85   73    29 0.283   1.32
 1.02 Term +  15109  15410  302  2  2   90   45   172 0.576   7.50
 1.03 PlyA +  17923  17928    6                               1.05

 2.00 Prom +  18057  18096   40                              -6.35
 2.01 Init +  20671  20748   78  0  0   69   31    84 0.036   1.91
 2.02 Intr +  21863  21953   91  1  1  108   68    51 0.036   3.75
 2.03 Intr +  42043  42234  192  2  0   98    4   103 0.047   1.44
 2.04 Intr +  44234  44369  136  0  1   38   78    60 0.742  -1.29
 2.05 Intr +  44812  44968  157  1  1   97   86   157 0.977  15.49
 2.06 Intr +  52996  53073   78  0  0   93  121    77 0.994  10.33
 2.07 Intr +  58109  58185   77  1  2  122   75    89 0.114   8.39
 2.08 Intr +  71322  71389   68  0  2  107   79    35 0.027   2.13
 2.09 Intr +  72031  72144  114  2  0   81  103   154 0.667  15.70
 2.10 Intr +  72824  73002  179  0  2  104   44   172 0.833  13.12
 2.11 Intr +  75254  75341   88  1  1   34   98    96 0.714   3.82
 2.12 Intr +  79855  80018  164  2  2   46  115   262 0.961  23.47
 2.13 Intr +  83228  83388  161  1  2   61  103   121 0.994   8.76
 2.14 Intr +  88595  88719  125  2  2  104  103    47 0.824   7.11
 2.15 Intr +  93436  93599  164  2  2   75   83   135 0.941  10.47
 2.16 Intr +  95529  95606   78  2  0   55   87    86 0.023   4.03
 2.17 Intr + 100514 100819  306  1  0    5   61   346 0.001  19.32
 2.18 Intr + 109826 109916   91  1  1   91   75   140 0.999  11.65
 2.19 Intr + 114275 114442  168  0  0   36  107   186 0.978  14.30
 2.20 Intr + 122904 123001   98  1  2   32   49    84 0.317  -2.29
 2.21 Intr + 123349 123519  171  0  0   39   91   181 0.984  12.72
 2.22 Intr + 135166 135249   84  0  0   84   94    52 0.184   4.50
 2.23 Intr + 137350 137419   70  0  1   69  106    44 0.240   2.14
 2.24 Intr + 140402 140521  120  0  0   76   78    49 0.533   2.25
 2.25 Intr + 140875 141083  209  2  2   90   78   299 0.917  26.97
 2.26 Intr + 147442 147591  150  0  0   53   94    91 0.914   5.64
 2.27 Intr + 151097 151260  164  1  2  119   53    70 0.993   4.45
 2.28 Intr + 154175 154399  225  2  0   58   90   256 0.997  18.98
 2.29 Intr + 155865 156005  141  0  0   70   97   123 0.997   9.95
 2.30 Intr + 156368 156452   85  2  1   52   71    51 0.979  -1.30
 2.31 Intr + 156893 157125  233  1  2   83   94   233 0.995  19.05
 2.32 Intr + 159634 159766  133  1  1   81   89   157 0.994  14.83
 2.33 Intr + 165531 165633  103  2  1   23   91   116 0.979   4.23
 2.34 Intr + 166192 166333  142  2  1   81  106   139 0.996  13.49
 2.35 Intr + 170193 170250   58  0  1  113  101     2 0.683   1.97
 2.36 Intr + 171225 171410  186  2  0   28   36   133 0.409   1.06
 2.37 Intr + 175540 175655  116  0  2   28   62    81 0.427  -2.17
 2.38 Intr + 175771 175858   88  1  1   52   91    86 0.894   4.35
 2.39 Intr + 177870 178082  213  2  0   79    2   226 0.869  11.09
 2.40 Intr + 180403 180563  161  0  2  103  106   182 0.999  19.36
 2.41 Intr + 183492 183629  138  0  0   65  100   123 0.999   9.86
 2.42 Intr + 184898 185006  109  2  1  107  115   115 0.996  15.47
 2.43 Term + 189616 189729  114  0  0   74   45   105 0.785   2.39
 2.44 PlyA + 190524 190529    6                               1.05

 3.00 Prom + 194214 194253   40                              -6.35
 3.01 Init + 198724 198811   88  0  1   91   94   166 0.554  16.35
 3.02 Intr + 203813 203903   91  0  1   64  106    40 0.272   1.53
 3.03 Term + 204958 205057  100  1  1   92   46    80 0.349   0.82
 3.04 PlyA + 205367 205372    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  58109  58189   81  1  0  122   50    98 0.882   6.11
S.002 Sngl -  63636  63424  213  0  0   39   36   233 0.877   8.13
S.003 Term -  68335  68245   91  0  1   97   48    78 0.861   0.91
S.004 Init -  69266  69127  140  2  2   69   94   108 0.866   9.17


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:76517585_76723230|GENSCAN_predicted_peptide_1|112_aa
MAVPFCIRASNIYSPRGLDLKQALDWLVLVGGPLRALGNIRHSLPQHPQPLRGWPRPTAA
AISLHSHATRAASHTASHVPGPQRRGASTSLCLFNGGALKSSPQLASLKSGL

>gi568815593r:76517585_76723230|GENSCAN_predicted_CDS_1|339_bp
atggccgtgccattttgcattcgtgccagcaatatatacagccctagaggactggacctg
aaacaagccctggactggctcgttcttgtcggaggaccactccgtgcccttggaaacatc
aggcactctttgccccaacacccacagcctctgagaggatggcccagacccactgcagca
gcaatttcccttcactcccatgccaccagggcagctagccacactgcctctcatgttcca
ggtccccagagaaggggtgccagcacctctctgtgtctctttaatggtggagcactcaaa
tcaagcccccaactggcctcactgaaatccggcttgtga

>gi568815593r:76517585_76723230|GENSCAN_predicted_peptide_2|1941_aa
MIQLPSTGSLPRHVGIVEVTIQDEIWCQPGRERETVKSSAQPAVRLGARCSSLLLAASGS
LPAFPTTAGPPIMSFHSMSFPHNVDEEKEGATVEFVWSPQVCVGFLWGLVFFHVPKMCML
DKCVVISSWYWKKESVLFKEALSASLIPMPLFHAFLPFLVVIPGLRWMEVCLVEELPPTT
ELEEGLRNGVYLAKLAKFFAPKMVSEKKIYDVEQTRYKKSGLHFRHTDNTVQWLRAMESI
GLPKIFYPETTDVYDRKNIPRMIYCIHALSLYLFKLGIAPQIQDLLGKVDFTEEEISNMR
KELEKYGIQMPSFSKIGGILANELSVDEAALHAAVIAINEAVEKGIAEQTVVTLRNPNAV
LTLVDDNLAPEYQKELWDAKKKKEENARLKNSCISEEERDAYEELLTQAEIQGNINKVNR
QAAVDHINAVIPEGDPENTLLALKKPEAQLPAVYPFAAAMYQNELFNLQKQNTMNYLAHE
ELLIAVEMLSAVALLNQALESNDLVSVQNQLRSPAIGLNNLDKAYVERYANTLLSVKLEV
LSQGQDNLSWNEIQNCIDMVNAQIQEENDRVVAVGYINEAIDEGNPLRTLETLLLPTANI
SDVDPAHAQHYQDVLYHAKSQKLGPHTTCGMGAVSSDVNEPEAQGECLAKAPVGERMDDG
QVAVDADAGKEQNGAVHVAIEDDCGGPAQDLSKYPVVPIEMISYLKGQCNTKKKICNGQV
GVEYSGTDGSGPEEKHPQGHSIGRDTNYKHQEDSESVSKVLWLDEIQQAVDDANVDKDRA
KQWVTLVVDVNQCLEGKKSSDILSVLKSSTSNANDIIPECADKYYDALVKAKELKSERGV
CLLWPGEEMGKKSEDLMAIAVFSLAVRGKREDIIEEVTVGYIRENIWSASEELLLRFQAT
SSGPILREEFEARKSFLHEQEENVVKIQAFWKGYKQRKEYMHRRQTFIDNTDSIVKNNEI
VKIQSLLRANKARDDYKTLAFTYFRLLPKDPLGWEKPLSASCSKNVSHLSSSSTRSQGRV
GSENPPLTVIRKFVYLLDQSDLDFQEELEVARLREEVVTKIRANQQLEKDLNLMDIKIGL
LVKNRITLEDVISHSKKLNKKKGGEMEILNNTDNQGIKSLSKERRKTLETYQQLFYLLQT
NPLYLAKLIFQMPQNKSTKFMDTVIFTLYNYASNQREEYLLLKLFKTALEEEIKSKVDQV
QDIVTGNPTVIKMVVSFNRGARGQNTLRQLLAPVVKEIIDDKSLIINTNPVEVYKAWVNQ
LETQTGEASKLPYDVTTEQALTYPEVKNKLEASIENLRRVTDKVLNSIISSLDLLPYGLR
YIAKVLKNSIHEKFPDATEDELLKIVGNLLYYRYMNPAIVAPDGFDIIDMTAGGQINSDQ
RRNLGSVAKVLQHAASNKLFEGENEHLSSMNNYLSETYQEFRKYFKEACNVPEPEEKFNM
DKYTDLVTVSKPVIYISIEEIISTHSLLLEHQDAIAPEKNDLLSELLGSLGEVPTVESFL
GEGAVDPNDPNKANTLSQLSKTEISLVLTSKYDIEDGEAIDSRSLMIKWDCLVVGKQAQG
IHSFCIMQPQESGGYYQYFTDEETRHRTGINLFLGNTVTKWSRDSNPHDLKSSRAHTLDH
KVLQLVEGKYNATTSSTESPDFDYQAFINFQEPYSRPGEYPQECFILRTKKLIIDVIRNQ
PGNTLTEILETPATAQQEVDHATDMVSRAMIDSRTPEEMKHSQSMIEDAQLPLEQKKRKI
QRNLRTLEQTGHVSSENKYQDILNEIAKDIRNQRIYRKLRKAELAKLQQTLNALNKKAAF
YEEQINYYDTYIKTCLDNLKRKNTRRSIKLDGKGEPKGAKRAKPVKYTAAKLHEKGVLLD
IDDLQTNQFKNVTFDIIATEDVGIFDVRSKFLGVEMEKVQLNIQDLLQMQYEGVAVMKMF
DKVKVNVNLLIYLLNKKFYGK

>gi568815593r:76517585_76723230|GENSCAN_predicted_CDS_2|5826_bp
atgatccaattaccttccactgggtcgctcccacgacatgtgggaattgtggaagtgaca
attcaagatgagatttggtgccagcctggaagggagcgggaaactgtgaagtcttcagct
cagccagcagtcagactaggagcaagatgctcatctctccttcttgcagcttccggttct
ctccctgcctttccaactacagcaggtcctccaataatgtcgtttcattcgatgtcattt
cctcataatgttgatgaagaaaaagaaggggccactgtggagttcgtgtggtctccccag
gtctgcgtgggttttctctggggactcgttttcttccacgtcccaaagatgtgcatgtta
gataagtgtgttgtcataagttcctggtattggaaaaaggagtctgtgttatttaaagaa
gccttgtctgcttccttaattccaatgccccttttccatgccttcctacctttcctggta
gtcattcctggactgaggtggatggaagtttgcttagttgaagaattgccaccaaccact
gaattggaagaagggctccggaatggagtttaccttgcaaagttagccaagttctttgcc
ccgaaaatggtatcagagaaaaagatctatgatgtggaacaaacacgttataagaagtct
ggccttcattttcgacacacagataataccgtccagtggttaagagcgatggagtctatt
ggtctacccaagatattttatccagaaacaacagatgtctatgatcggaaaaacatacca
agaatgatatattgcattcacgcactgagtttgtatctgttcaaactaggaatagcaccc
cagatccaggatttgttgggcaaagtagacttcacagaggaggaaatcagtaatatgaga
aaagaacttgagaaatatggaatacagatgccatctttcagcaaaataggtggtattctg
gccaatgaactgtccgtggatgaagctgcattacatgctgcagttatagccattaatgaa
gcagttgaaaaaggaatagcagagcaaaccgttgtaacactaagaaacccaaatgcggtt
ttaactttagtggatgacaaccttgcaccagaatatcagaaagaactctgggatgccaaa
aagaaaaaagaggaaaatgcaagactgaagaatagctgtatttcagaagaagaaagagat
gcttatgaagaactgctgacacaagcagaaatccaaggcaatattaataaagtcaacagg
caggctgcagtggaccatatcaatgctgtcattccggaaggtgaccccgagaatacgctg
cttgcactgaagaaaccagaggcccagctgcctgctgtttatccctttgctgctgccatg
tatcagaacgaacttttcaacctccagaaacagaacaccatgaactacttggcccacgag
gagcttttgattgctgtggaaatgttgtctgctgttgctttactaaaccaggccttggaa
agcaacgatcttgtgtctgtgcagaatcaactcagaagccccgcaataggcttaaacaat
ctggacaaggcatatgtggaacgttatgcaaacacactactctctgttaaactagaagtt
ttatcccaagggcaagataacttaagctggaatgaaattcagaattgtattgatatggtt
aatgctcaaattcaagaagaaaatgaccgagttgtagctgtagggtacatcaatgaagct
attgatgaagggaatcctttgaggactttagaaactttgctcctacctactgcgaatatt
agtgatgtggacccagcccatgcccagcactaccaggatgttttataccatgctaaatca
cagaaactcggacctcataccacctgtggaatgggtgctgtctcatctgatgtgaacgag
cctgaggctcagggcgaatgcctggccaaggccccggtaggtgaaaggatggacgatggc
caggtagcggttgatgctgatgcaggcaaggagcagaatggagcagtacatgttgccata
gaagatgactgtggtggcccggcacaggacctctccaaatacccagttgttcccattgag
atgataagctatcttaaagggcaatgtaacacaaaaaagaaaatctgcaatggccaggtt
ggtgtagaatacagtggtacagatggatctggtcctgaagaaaagcatccacagggtcac
agcattggccgggacaccaactacaaacaccaggaggactctgagagtgtttccaaagtg
ctttggctggatgagatacagcaagccgtcgatgatgccaacgtggacaaggacagagca
aaacaatgggttactctggtggttgatgttaatcagtgtttggaaggaaaaaaatcaagt
gatattttgtctgtattgaagtcttccacttctaatgcaaatgacataatcccggagtgt
gctgacaaatactatgatgcccttgtgaaggcaaaagagctcaaatctgaaagaggggtc
tgcctactctggcctggggaagaaatgggaaagaagtctgaggaccttatggccattgca
gtcttttccttggcagtccgagggaagcgggaggacattattgaggaagtcacagtaggt
tacattcgtgagaatatatggtctgcttcagaagagttgcttcttcgctttcaagccaca
agctcaggacccatccttagggaagagtttgaagctagaaaatcatttttgcatgaacaa
gaagagaatgtggtcaaaatacaggctttttggaaaggatataaacaacggaaggagtat
atgcacaggcggcaaacgttcattgataatactgattctattgtgaagaataatgaaatt
gtgaaaatacagtcactgttgagagcgaacaaagctagagatgactacaaaacattggct
ttcacctacttccggctccttcccaaagatcctttgggctgggagaaaccactttctgct
tcctgcagcaagaatgtaagtcacttatctagctcaagcacaaggtctcagggtcgagtt
ggctctgaaaacccaccattaacagtaattcgcaaatttgtatacctgctggaccaaagt
gatttggatttccaggaggaactagaggttgcacgattaagggaagaagtagtgaccaag
atcagggccaatcaacagctggaaaaagacctgaacctgatggacatcaagattggactg
ctggtgaagaacaggatcacactagaggatgtaatttcacatagtaaaaagctgaacaag
aaaaaaggaggagaaatggaaatactgaataacaccgacaaccaaggaataaaaagtttg
agtaaggagaggagaaaaacactagaaacatatcagcagctgttttaccttttacagacc
aaccctttatacttggctaagctgattttccagatgccacagaacaagtccactaaattt
atggatactgttattttcacactatataattatgcctctaatcagcgagaagaatatcta
cttctcaagctttttaaaactgctctggaggaagaaataaaatcaaaagtggaccaggta
caggacatagttactggtaaccctacagtcatcaagatggtcgtcagcttcaatagaggt
gcccggggacagaacaccctgcgccaactcctggctccagtggtaaaagagatcatcgac
gacaagtcgctgattatcaacacaaaccctgtagaggtgtacaaggcttgggtgaaccaa
ctagaaacacagactggagaggccagcaagttgccttatgatgtgaccacagaacaagct
ctaacatacccagaagtgaaaaataaactggaggcttccattgagaacctgagaagggtc
accgacaaagtcctgaattctatcatttcttcccttgatctactgccttatggattgagg
tatatagccaaagtactgaagaattcgatccatgagaaattccccgatgcaacagaagat
gagctattaaagattgttggaaacctcctgtactatcggtacatgaatccagccattgta
gctccagatggctttgatatcatcgacatgacagctggaggtcagataaattctgaccaa
aggagaaacttaggatcagtggccaaggttcttcagcacgcagcctccaacaagctgttt
gaaggagaaaatgagcatctctcatctatgaacaattatttatcagagacgtatcaggaa
ttcaggaaatatttcaaagaagcatgtaatgtccctgagccagaagagaagtttaatatg
gacaaatacacagacctggtgacagtcagcaaaccagtcatttatatttcaattgaagaa
atcatcagcacacactcactcctgttggaacaccaggatgcaattgcccctgagaaaaat
gacttactgagtgaattgctggggtcgctgggagaggtgccaaccgtggaatcttttctt
ggggaaggagcagttgaccccaatgaccctaacaaggcaaatacactaagtcagctttca
aagaccgagatttctcttgtcttgacaagcaaatatgacatagaggacggtgaagctata
gatagccgaagcctcatgataaaatgggactgtctagttgtaggaaaacaagctcagggc
atccactcattctgtattatgcaaccccaagagagtggaggttattatcagtattttaca
gatgaggaaactaggcacagaacaggtataaaccttttcctgggtaacacagttactaag
tggagcagagattcaaacccacatgatttgaaatcctccagggcccacactcttgatcat
aaagttttacaacttgtcgagggcaagtataatgctacaacatcaagcacagaaagccca
gactttgattatcaagcattcataaactttcaggagccttatagcagacctggtgaatat
ccgcaagaatgttttattttaaggaccaagaagctgataattgatgtgatccggaaccag
ccagggaacacattgacagaaatcttagagacaccagcaactgcgcaacaggaggtagac
catgccacggacatggtgagccgtgcaatgatagattccaggactccagaagaaatgaag
catagccaatctatgattgaagatgcacagctgcctcttgagcagaagaagaggaaaatc
cagaggaatcttcggacgttggaacagactggacacgtgtcatccgaaaataaataccaa
gacattctcaatgagattgccaaggatattcgaaatcaaagaatctatcgtaagcttcga
aaagctgaattggcaaaacttcagcagaccctgaatgcacttaacaagaaggcagcattt
tatgaagagcaaatcaattattatgacacctacataaagacttgtttagacaacttaaaa
agaaaaaatactcggagatcaattaaactagatggaaaaggagaacccaaaggggcgaag
agagcgaagccagtgaagtacactgcagcaaagctgcatgagaaaggtgtcctgctagat
atagatgatcttcaaacaaaccagtttaagaatgttacatttgatatcatagctactgaa
gatgtaggcattttcgatgtaagatcaaaattccttggtgttgagatggaaaaggtgcaa
ctcaatattcaggatttacttcagatgcaatatgaaggagtagctgtaatgaaaatgttt
gataaggttaaagtgaatgtaaaccttctcatatacctgctgaacaagaagttctatgga
aagtga

>gi568815593r:76517585_76723230|GENSCAN_predicted_peptide_3|92_aa
MGPRRLLLVAACFSLCGPLLSARTRARRPDTVSHTDLVVVLGGSHLKGPDGPIYIICFQN
FLLGLLSYASRGVPAPGHGMGGEEASDIGSFF

>gi568815593r:76517585_76723230|GENSCAN_predicted_CDS_3|279_bp
atggggccgcggcggctgctgctggtggccgcctgcttcagtctgtgcggcccgctgttg
tctgcccgcacccgggcccgcaggccagataccgtctcccacactgaccttgtcgtggta
cttggaggaagccacttaaagggccctgacggtcctatatacattatttgctttcaaaac
ttcctcttaggcttgctttcctatgcttccagaggagtacctgctccaggacatggaatg
ggaggagaggaggcctctgatattggcagcttcttctga