GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:41:49

Sequence gi568815593f:146239113_146440441 : 201329 bp : 41.05% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  12599  12763  165  0  0  130  115   185 0.977  24.41
 1.02 Intr +  15831  15980  150  1  0  113   78   134 0.999  14.11
 1.03 Intr +  19337  19481  145  0  1  100   69   121 0.999   9.82
 1.04 Intr +  21633  21786  154  0  1   62   99   102 0.999   7.85
 1.05 Intr +  22398  22694  297  2  0   62   84   209 0.886  14.05
 1.06 Intr +  24379  24519  141  0  0   67   85   133 0.998  10.53
 1.07 Intr +  28537  28656  120  0  0  102   92    14 0.884   2.97
 1.08 Intr +  30095  30169   75  1  0   83  116    30 0.943   4.09
 1.09 Intr +  30308  30472  165  1  0   82   55   104 0.973   5.74
 1.10 Intr +  31842  31946  105  2  0   60   78   115 0.981   7.19
 1.11 Intr +  32371  32562  192  0  0   93   89   143 0.994  13.67
 1.12 Intr +  45510  45620  111  2  0   39   84   106 0.964   4.96
 1.13 Term +  46835  46918   84  1  0   89   44   128 0.997   5.17
 1.14 PlyA +  47815  47820    6                               1.05

 2.08 PlyA -  47908  47903    6                               1.05
 2.07 Term -  56072  55894  179  0  2   61   48   112 0.293   1.37
 2.06 Intr -  72800  72739   62  1  2   69  100    63 0.095   3.06
 2.05 Intr -  81212  81086  127  0  1   48   61   109 0.067   3.02
 2.04 Intr -  93931  93774  158  0  2  -18  107   137 0.674   3.73
 2.03 Intr -  94191  94023  169  1  1  118   44    72 0.626   3.88
 2.02 Intr -  94675  94638   38  0  2  100  116     3 0.894   1.29
 2.01 Init -  95215  94983  233  1  2   69   47   153 0.485   5.38
 2.00 Prom -  95712  95673   40                             -13.01

 3.00 Prom +  96436  96475   40                              -5.25
 3.01 Init +  96896  96932   37  1  1   78   89    34 0.829   2.72
 3.02 Intr +  98308  98498  191  2  2   75   72   103 0.677   5.78
 3.03 Intr +  99293  99379   87  1  0   49   41   126 0.360   3.25
 3.04 Intr +  99548  99636   89  1  2   64   47    59 0.474  -2.75
 3.05 Intr +  99991 100120  130  1  1   48   98   100 0.810   6.78
 3.06 Term + 100436 101332  897  1  0  123   38  1109 0.973 100.78
 3.07 PlyA + 102540 102545    6                               1.05

 4.05 PlyA - 102604 102599    6                               1.05
 4.04 Term - 103401 103239  163  2  1   14   42   192 0.295   3.63
 4.03 Intr - 104316 104159  158  0  2   47   26   172 0.198   4.79
 4.02 Intr - 113671 113571  101  2  2   90   57    42 0.013   0.21
 4.01 Init - 137900 137603  298  2  1   48  103   157 0.191  10.63
 4.00 Prom - 140531 140492   40                              -5.25

 5.00 Prom + 145372 145411   40                              -7.55
 5.01 Init + 156048 156187  140  2  2   40  -16   254 0.352   9.86
 5.02 Intr + 161496 161783  288  0  0   93  101   135 0.358  10.74
 5.03 Term + 168083 168134   52  2  1  128   54    31 0.191  -0.38
 5.04 PlyA + 168226 168231    6                               1.05

 6.00 Prom + 185264 185303   40                              -3.75
 6.01 Init + 189373 189468   96  0  0   64   40   130 0.679   6.16
 6.02 Intr + 193691 193921  231  1  0   64   93   200 0.952  15.15
 6.03 Intr + 195617 195719  103  1  1   74   33    95 0.165   1.43
 6.04 Term + 200185 200294  110  2  2   84   54    56 0.125  -0.51
 6.05 PlyA + 200751 200756    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 140688 140909  222  2  0   73   38   155 0.836   4.93


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:146239113_146440441|GENSCAN_predicted_peptide_1|634_aa
XQPMYSREHGAAASERLQLGTPPPLLAARLVPPRNLMGSSIGYHTSVSSPTPLVPDTYEP
DGYNPEAPSITSSGRSQYRQFFSRTQTQRPNLIGLTSGDMDVNPRAANIVIQTEPPVPVS
INSNITRVVLEPDSRKRAMSGLEGPLTKKPWLGKQGNNNQNKPGFLRKNQYTNTKLEVKK
IPQELNNITKLNEHFSKFGTIVNIQVAFKGDPEAALIQYLTNEEARKAISSTEAVLNNRF
IRVLWHRENNEQPTLQSSAQLLLQQQQTLSHLSQQHHHLPQHLHQQQVLVAQSAPSTVHG
GIQKMMSKPQTSGAYVLNKVPVKHRLGHAGGNQSDASHLLNQSGGAGEDCQIFSTPGHPK
MIYSSSNLKTPSKLCSGSKSHDVQEVLKKKQEAMKLQQDMRKKRQEVLEKQIECQKMLIS
KLEKNKNMKPEERANIMKTLKELGEKISQLKDELKTSSAVSTPSKVKTKTEAQKELLDTE
LDLHKRLSSGEDTTELRKKLSQLQVEAARLGILPVGRGKTMSSQGRGRGRGRGGRGRGSL
NHMVVDHRPKALTVGGFIEEEKEDLLQHFSTANQGPKFKDRRLQISWHKPKVPSISTETE
EEEVKEEETETSDLFLPDDDDEDEDEYESRSWRR

>gi568815593f:146239113_146440441|GENSCAN_predicted_CDS_1|1905_bp
ngacagcccatgtactctcgtgaacatggtgctgctgcatctgagcgacttcagttgggg
acaccgcctcctctgttggcagctcgtttggtgccacctcgaaacctcatgggatcctcc
attggataccatacctcagtctccagccctacccctctggttccagatacatatgaacca
gatggttacaacccagaagctcctagtattactagttctggtagatctcagtacagacag
ttcttttcaagaactcagacacagcgtcccaatctgattggcctaacatctggagatatg
gatgtaaatccaagagctgctaacattgtgatccagactgaaccaccagttcctgtttcg
attaatagcaacataaccagagtagttcttgaaccagatagtcgaaaaagagctatgagt
ggtttggaagggccactcacaaagaaaccttggctgggaaagcaaggaaataacaatcaa
aataaaccagggttcttacgaaagaatcagtatacaaacaccaaattagaagtcaagaaa
atccctcaggaattgaacaacattaccaagctcaatgaacacttcagcaaatttggaact
attgttaatatccaggttgcttttaagggtgacccagaagcagccctaatccaatatctt
accaatgaggaggccaggaaagccatttctagcacagaagcagttctaaacaaccgattc
attcgagtcttgtggcatagggaaaataatgagcaaccgacactacagtcctcagcacag
ctgctcctgcaacaacagcaaacacttagtcacctctcacagcagcaccatcacctgcca
cagcatctacatcagcagcaggtgctagtggcccagtctgctccttcaacagtgcacgga
ggtatccagaagatgatgagcaaaccacagacatcaggtgcatatgttcttaacaaagtt
cctgttaaacatcgtcttggacatgcaggtggtaaccagagtgatgcatcacatttgttg
aatcagtctggtggtgctggagaagattgccagatattttcaactccaggccatccaaaa
atgatttacagctcctcaaacttaaagacaccttcaaagctctgttcagggtctaaatct
catgatgttcaagaagtgcttaaaaaaaaacaggaagcaatgaagttacaacaagatatg
aggaaaaaaagacaggaagtgttagaaaagcaaatagaatgccaaaagatgttaatatcc
aagttagaaaaaaacaaaaacatgaaaccagaagaaagagcaaatataatgaagactttg
aaagagcttggagagaagatctcacaattaaaagatgaattaaaaacatcttctgcagtc
tccacaccatctaaagtgaagacaaaaacggaggcccagaaggagttattagatactgaa
ctggacctccacaagaggctgtcctcaggagaagacaccacagaattacggaaaaaactc
agtcagttacaggttgaggctgcacggttaggtattttacctgtgggtcgaggaaagacc
atgtcctctcaaggtcgaggaagaggccgagggcgtggaggaagaggaaggggctcacta
aatcacatggtggtggaccatcgtcccaaagcactaacagttggaggattcattgaggaa
gaaaaagaagacttgcttcagcatttctcaaccgcaaaccaagggccaaaatttaaagac
cgtcggctacagatatcatggcacaagcccaaggtaccatctatatccactgagactgaa
gaagaagaagtcaaggaggaggaaacagaaacctcagatttgtttttgcctgatgatgac
gatgaagatgaagatgaatatgagtctcgctcatggcgaagatga

>gi568815593f:146239113_146440441|GENSCAN_predicted_peptide_2|321_aa
MPSRSEAAGGAAWPGVRSRLTCLPLPFSGRLSQTSHMYSPPAQLLRDSSVGRCLALSAKW
LRGSETPRGIQGPEAERPPSYPHGAEASAEGPAVCSSLSSRLENICVISSLASSVLSGLN
ESILEDENWFCSPLLQFRDILKFKAVRGGGQSTGGVDSNMGTWLTCWVTLDKSLMGSESQ
FPYHYKRVRETGSIVPSGGVATPLSDVDDHDEDEDSYGYCARHCARGFTEISLFNPSNSP
MRSGSPSLQMMQILVPTTDLAEGHAERKTSEAIYCYHFCYPKSMKHKTASDDNQNLKMNK
KAILHGCKTDEAKYAMLFLQY

>gi568815593f:146239113_146440441|GENSCAN_predicted_CDS_2|966_bp
atgccatcgcgcagcgaggcagctggcggggctgcctggccaggtgttcgcagccgcctg
acttgccttcctctccctttctctggtcgcctttcacaaacttctcacatgtactcgccg
cctgcgcagctgctgcgggactcgtctgttggccgctgccttgcattgtctgcaaagtgg
ctcagaggatccgagacgcccagagggattcaggggccagaggccgagcgtcccccctca
tacccccatggagctgaggcttctgcagaaggtcctgctgtgtgttcatctttgagctct
agacttgagaatatctgtgtcatcagcagcttggctagctctgtgctatctggactcaat
gagtccatcctggaagatgagaactggttttgctctcctcttctgcaattcagagacatc
ttaaagttcaaagccgtaagaggtggtggacagagcactggaggtgtggattcaaatatg
ggtacatggctaacctgctgggtgaccctagacaagtcactcatgggctctgagtctcag
tttccttatcactacaagagggttagggagacaggctccatcgtcccctctggtggagtg
gctactcctctcagtgatgttgacgatcatgatgaagatgaagatagttatggatactgt
gccaggcactgtgctagaggctttactgagatttctttatttaatccttccaacagtcct
atgagatcaggttctccttctctgcagatgatgcagattttagttccaaccacagaccta
gctgaaggccatgctgaaagaaagacaagtgaagccatctactgttaccacttctgctac
cctaagtctatgaagcataaaactgccagtgatgataatcaaaacctcaaaatgaataaa
aaggcaatcctccatggttgtaaaacagacgaggcaaaatatgctatgttgtttttacaa
tattga

>gi568815593f:146239113_146440441|GENSCAN_predicted_peptide_3|476_aa
MGKTLKHMGPDTGREPAEGAGSDGEKSNWRAPRGRGSPDLSGRPLGLRDVPLNHTTPPRS
DSGKPGTHIPCTITGRPLTLSRARLGAWRRLLAAPRDRTLVDSLGAVRAGTGRRGWDFWG
GMGEGKSTKKKESERSAKMMAMNSKQPFGMHPVLQEPKFSSLHSGSEAMRRVCLPAPQLQ
GNIFGSFDESLLARAEALAAVDIVSHGKNHPFKPDATYHTMSSVPCTSTSSTVPISHPAA
LTSHPHHAVHQGLEGDLLEHISPTLSVSGLGAPEHSVMPAQIHPHHLGAMGHLHQAMGMS
HPHTVAPHSAMPACLSDVESDPRELEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGS
LSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPELFNGSERKRKRTSIA
APEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH

>gi568815593f:146239113_146440441|GENSCAN_predicted_CDS_3|1431_bp
atgggaaaaaccctaaaacacatgggaccagacacagggcgggaaccagcggagggggct
ggctcggatggggagaaaagcaactggagggcgccgaggggaagagggagcccggatctg
tcagggcgtcctcttggactaagggatgttcccctaaaccacaccaccccacctcgttca
gattctgggaaacccggcacgcacataccctgcacaataacaggcaggcccctcaccctc
tccagggcccgtctgggcgcttggaggcgcctcctcgctgcgccgcgggaccggactctg
gtggacagcttgggcgcagttcgagctgggacaggacggagaggttgggacttttggggt
ggcatgggggaagggaagtccacgaagaagaaagaatcggaaaggagcgcgaagatgatg
gccatgaactccaagcagcctttcggcatgcacccggtgctgcaagaacccaaattctcc
agtctgcactctggctccgaggccatgcgccgagtctgtctcccagccccgcagctgcag
ggtaatatatttggaagctttgatgagagcctgctggcacgcgccgaagctctggcggcg
gtggatatcgtctcccacggcaagaaccatccgttcaagcccgacgccacctaccatacc
atgagcagcgtgccctgcacgtccacttcgtccaccgtgcccatctcccacccagctgcg
ctcacctcacaccctcaccacgccgtgcaccagggcctcgaaggcgacctgctggagcac
atctcgcccacgctgagtgtgagcggcctgggcgctccggaacactcggtgatgcccgca
cagatccatccacaccacctgggcgccatgggccacctgcaccaggccatgggcatgagt
cacccgcacaccgtggcccctcatagcgccatgcctgcatgcctcagcgacgtggagtca
gacccgcgcgagctggaagccttcgccgagcgcttcaagcagcggcgcatcaagctgggg
gtgacccaggcggacgtgggcgcggctctggctaatctcaagatccccggcgtgggctcg
ctgagccaaagcaccatctgcaggttcgagtctctcactctctcgcacaacaacatgatc
gctctcaagccggtgctccaggcctggttggaggaggccgaggccgcctaccgagagaag
aacagcaagccagagctcttcaacggcagcgaacggaagcgcaaacgcacgtccatcgcg
gcgccggagaagcgttcactcgaggcctatttcgctatccagccacgtccttcatctgag
aagatcgcggccatcgctgagaaactggaccttaaaaagaacgtggtgagagtctggttc
tgcaaccagagacagaaacagaaacgaatgaagtattcggctgtccactga

>gi568815593f:146239113_146440441|GENSCAN_predicted_peptide_4|239_aa
METFTTGDSKLNTGDGKGLVKSPDVDLKSSGISSKGSARSHLTGYDQYWGLYSSKGSLSN
FWTTLMVSEAFCRLSSNNSLLVVLGQQCVATEIKSNSSSSTPLGPHKTKVSLLSHKSPSD
FGLKNTSPFSSTGTSGKGDYTILGKPHLQLLPEASRRVRRRRRSGALRRRERVERFADRA
AAPACTKAFLQLANKKRERKENRELASMEHLLCTGHYARRFAAVIAVPPQRSRGGPQSE

>gi568815593f:146239113_146440441|GENSCAN_predicted_CDS_4|720_bp
atggaaaccttcaccactggtgactccaagctgaacacaggggatggcaaaggcctagtg
aagagtccagatgtagacttaaagagctctggaatctcctccaagggttcagccagaagc
catctgactggctatgaccagtattggggactttattcttccaaaggcagtctatccaat
ttttggaccactctgatggtgtcagaggccttctgtagattgagctcaaataactcactt
ctagttgtcttaggtcaacaatgtgtggccacagagattaagtcaaactcctcttcatct
acacccctggggccccataaaacaaaagtaagccttctttcacataaaagcccttcagat
ttcggccttaaaaacacaagtccattttcttctacaggaacgagtggcaaaggcgactac
acaatcctggggaaaccacatctccagttgcttcctgaagcaagccgaagagtgaggcga
cggcgccgttccggcgcactcaggaggagggaaagggtggagcgcttcgctgaccgggct
gcagctccggcctgcacgaaggcgtttctacagctcgcaaataaaaagagggagcgtaaa
gagaacagggagctggcgtctatggagcacctactatgtacagggcactatgctaggcgc
tttgcagcagttatagcagtacccccacaaagaagccgaggtggaccccagagtgaataa

>gi568815593f:146239113_146440441|GENSCAN_predicted_peptide_5|159_aa
MTKYGPSAKERQYGAILDATQEDHLKRQRDLDRQKLEVESEMPGGYGFLLRAFPQLIICT
RIPSQPLSLENLRQAPFMDSVLGMGDGGGHPEKKRTGLKLGQGPQPCRLTLPHPSHPDST
VQMPWMCHLECHQLLKKFQKKGINQESTGLWLRTVGRHN

>gi568815593f:146239113_146440441|GENSCAN_predicted_CDS_5|480_bp
atgaccaaatatggaccaagcgcaaaagaacgccagtatggagccatcttagatgctacc
caagaggaccacctgaagaggcaacgggaccttgatagacagaagctggaagtggaatct
gagatgcccgggggctatgggtttcttctcagggctttccctcaattaatcatttgcaca
agaattccatctcagcctctgagtctagagaacctaagacaagcccctttcatggacagt
gtgctgggcatgggagatggaggagggcatccagaaaagaagagaacagggctgaagcta
ggacagggaccacaaccatgtcgccttactttgccccatccttcccaccctgattctact
gtgcagatgccatggatgtgccacttagaatgccatcaattattgaagaagttccaaaag
aagggaataaatcaagaaagcacaggactctggctcagaactgttggcaggcacaactga

>gi568815593f:146239113_146440441|GENSCAN_predicted_peptide_6|179_aa
MNGYEVALVVSPSGPSGGLDVEDSDTERAAKAKGYTRQQFCHESTLNKGDQVIYNLTCLP
YCCVRFPLAGTGPHILYLSRVASNLELFKRGKGRGEQRKEEVTCGMLRKFPPSQRSLPPN
TVPASVFLPNYKEYDIKIQSKCSRNTRVRGSNQTDPEGKQSWSSASPYYDKRNCSRLKA

>gi568815593f:146239113_146440441|GENSCAN_predicted_CDS_6|540_bp
atgaatggatatgaggtggctttggtggtctcaccttcaggaccctctggtgggttggat
gtggaggacagtgacacggagagagctgccaaggctaaagggtacactcgccagcagttt
tgccatgagagtacactgaacaaaggagaccaggtcatttacaacctgacgtgtctaccc
tactgctgtgtccggtttccactggctggaacgggacctcacattctatatttgtcccga
gtggctagcaacttagaactttttaaaagaggcaaaggcagaggagaacaaaggaaggag
gaagtaacttgtggaatgctgagaaagtttccaccttcacaacggagtctccctccaaac
acagtccctgcttctgtgtttctgcctaactacaaagagtatgacataaagattcagagc
aaatgcagtagaaacacaagggttagaggaagcaatcagacagatccagaggggaaacag
tcctggtcttcagcaagtccatattatgataaaaggaactgttctagattaaaagcttga