GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:40:45

Sequence gi568815581f:15845249_16075339 : 230091 bp : 43.84% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  15681  15757   77  2  2   76   69    43 0.620   1.76
 1.02 Intr +  18807  18909  103  0  1   89   91    94 0.661   9.98
 1.03 Intr +  30877  30904   28  0  1  100   93     9 0.046   0.29
 1.04 Term +  38148  38278  131  1  2   95   45    50 0.096  -0.26
 1.05 PlyA +  40126  40131    6                               1.05

 2.04 PlyA -  40536  40531    6                               1.05
 2.03 Term -  49186  48947  240  1  0   68   44   104 0.879   0.03
 2.02 Intr -  51527  51441   87  2  0  141   89    43 0.925   9.87
 2.01 Init -  67878  67765  114  0  0   77   96    51 0.726   5.01
 2.00 Prom -  69129  69090   40                              -5.36

 3.00 Prom +  70515  70554   40                              -8.16
 3.01 Init +  70865  70931   67  1  1   74   91    26 0.292   2.73
 3.02 Intr +  82449  82627  179  1  2    5  113   119 0.465   5.74
 3.03 Intr +  83261  83319   59  1  2   72   80    68 0.074   2.08
 3.04 Intr +  97737  97831   95  0  2   78   60    84 0.104   4.21
 3.05 Intr +  99972 100335  364  1  1   39   94   794 0.142  69.34
 3.06 Intr + 101754 101884  131  0  2   59   64    50 0.429   0.04
 3.07 Term + 121653 121774  122  1  2   80   55   134 0.554   7.94
 3.08 PlyA + 124207 124212    6                               1.05

 4.00 Prom + 125225 125264   40                              -6.86
 4.01 Init + 126945 127050  106  2  1   48  103    16 0.332  -0.51
 4.02 Intr + 128327 128485  159  0  0   55   53   108 0.436   3.96
 4.03 Term + 129388 130094  707  2  2   15   39   468 0.405  28.28
 4.04 PlyA + 130471 130476    6                               1.05

 5.00 Prom + 150413 150452   40                              -3.96
 5.01 Init + 154601 154784  184  1  1   62   94   297 0.970  24.98
 5.02 Intr + 154870 155114  245  2  2   68   65   242 0.665  17.12
 5.03 Intr + 156667 156777  111  0  0   96   21   105 0.774   5.18
 5.04 Intr + 158583 158639   57  2  0   72  110    15 0.555   1.18
 5.05 Intr + 158953 159014   62  0  2  123  111    49 0.997   8.23
 5.06 Intr + 161226 161320   95  0  2   75   91    83 0.846   6.91
 5.07 Intr + 179769 179923  155  1  2   72  110   112 0.884  11.59
 5.08 Intr + 181292 181454  163  1  1   53   92    80 0.982   4.45
 5.09 Term + 182126 182274  149  0  2   75   35   139 0.956   5.36
 5.10 PlyA + 182881 182886    6                               1.05

 6.13 PlyA - 183929 183924    6                               1.05
 6.12 Term - 187235 187048  188  0  2   74   43   165 0.996   8.25
 6.11 Intr - 194406 194227  180  1  0   68   69   107 0.038   6.64
 6.10 Intr - 199635 199417  219  1  0   85   42   152 0.026   8.57
 6.09 Intr - 201845 201703  143  1  2   78  106    25 0.093   3.30
 6.08 Intr - 203670 203597   74  0  2   94  107    25 0.129   3.20
 6.07 Intr - 212816 212659  158  0  2   89   75    60 0.180   4.53
 6.06 Intr - 216646 216153  494  0  2   82   34   292 0.917  15.84
 6.05 Intr - 217022 216857  166  0  1  112   29    31 0.635  -1.38
 6.04 Intr - 218939 218820  120  0  0   74   82   211 0.770  19.57
 6.03 Intr - 220423 220237  187  1  1   60   85    33 0.428  -0.54
 6.02 Intr - 225277 225077  201  1  0  129   91   190 0.749  22.88
 6.01 Intr - 226417 226161  257  2  2   62   93   183 0.994  13.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 199563 199709  147  2  0   11   42   198 0.843   5.40


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:15845249_16075339|GENSCAN_predicted_peptide_1|112_aa
MRLLSTSTRGKVEVAPRKREPRSSFSVERRNPLVALAREYGGFKCNAVLKWYQKKTEGYM
YLPENGFIEGQEYGSNSTGYRVAKGFQAMVAGGLSARTVVLEERRKPTTPEL

>gi568815581f:15845249_16075339|GENSCAN_predicted_CDS_1|339_bp
atgagactgctgagcacctccaccagagggaaagtggaagtggccccaagaaagagggaa
ccacgaagcagtttcagtgtggaaagaagaaaccctctggtggccttggcccgggaatat
ggcggtttcaagtgcaatgctgtactgaaatggtaccagaagaagacagaaggttacatg
tatctccctgagaatgggttcatagaaggccaggaatatgggtctaactccactggctac
agagttgcaaagggttttcaagccatggtggcaggtggtctctcagccagaactgtggtt
ctggaggagaggaggaaacccacaactcctgaattatga

>gi568815581f:15845249_16075339|GENSCAN_predicted_peptide_2|146_aa
MGFWAAETIATDSATTDASGGTLGASHLTPHLIRPLSRVEVMSKVWQLKGTSHTGTSMGT
KANRLKMLLLRPGSALLPPPPSDTDFDITATVSPHLNVIPVTDSHSTEFLSGLFDDLSLF
INNFTCYKVYRLLVCVVQEGMTVQSS

>gi568815581f:15845249_16075339|GENSCAN_predicted_CDS_2|441_bp
atgggcttctgggcagcagagaccattgccacagacagtgcaacaacagatgcctcaggg
ggcacgttgggagcctctcacctgacacctcatttaatacgaccactttctagggtggaa
gtgatgtctaaagtttggcagctaaaaggaaccagccacacaggaacaagtatggggaca
aaagccaacagattaaagatgctactccttcgccctggctctgcactgctgcctcctcca
ccttctgacaccgattttgacatcactgccactgtctcccctcatctaaatgtgatccct
gtcactgactctcacagcactgagtttctctctgggctctttgacgacttatccttgttc
attaataactttacttgttataaagtctaccgcttgcttgtctgtgtagttcaggagggc
atgacagttcagagttcatga

>gi568815581f:15845249_16075339|GENSCAN_predicted_peptide_3|338_aa
MAACLRTGEDSCSPELSPSKGSVVQVRDEGTQPSKGRADGAAVENAGRRGIRDAPQCLLL
LTWRRLGSRVRRKVAFNIQVEKPVQLYKGMGLDVSQTRLGDRKCYWRSCLISLAFCVAAE
VCVNCCGNVIGGAGGARGPAGPAMLLETQDALYVALELVIAALSVAGNVLVCAAVGTANT
LQTPTNYFLVSLAAADVAVGLFAIPFAITISLGFCTDFYGCLFLACFVLVLTQSSIFSLL
AVAVDRYLAICVPLRLFRGSQQEQEPPAWEGCEPYVGVWPLHVLLPVLLDQEALCLPSVL
SDLCSRAVTATGWRTEGRKDVAHALQECFGEMDKRMQT

>gi568815581f:15845249_16075339|GENSCAN_predicted_CDS_3|1017_bp
atggctgcctgcttacgaacaggcgaagactcttgcagcccagagctgtctccctccaaa
ggcagtgtagttcaggtgagagatgaggggactcagcccagcaagggcagagcagatgga
gcggctgtggagaatgcaggaaggagaggaatccgggacgcccctcagtgcctgctgctg
ctgacatggagaagactcggatcaagagtcaggcgcaaggtggctttcaacatccaagtg
gagaagccggtgcagctgtacaagggcatgggactggatgtcagccagacaaggctgggg
gacaggaagtgctattggaggagctgcctgatctctctggccttctgtgtggcagcagaa
gtttgtgtcaactgctgtgggaacgtgattggtggagcagggggcgcccggggcccagct
ggcccggccatgctgctggagacacaggacgcgctgtacgtggcgctggagctggtcatc
gccgcgctttcggtggcgggcaacgtgctggtgtgcgccgcggtgggcacggcgaacact
ctgcagacgcccaccaactacttcctggtgtccctggctgcggccgacgtggccgtgggg
ctcttcgccatcccctttgccatcaccatcagcctgggcttctgcactgacttctacggc
tgcctcttcctcgcctgcttcgtgctggtgctcacgcagagctccatcttcagccttctg
gccgtggcagtcgacagatacctggccatctgtgtcccgctcaggttgtttcgtgggtcc
cagcaggaacaggagcctcctgcttgggagggctgtgagccttatgtgggtgtctggcca
ctccatgtgctgctgcccgtgctgttggaccaggaggccttatgtctcccatcagtgctc
agtgacctctgcagcagagcagtgactgccacgggctggcgaacggaaggacggaaggac
gtggcccatgcccttcaggaatgttttggggagatggacaaacgcatgcagacctga

>gi568815581f:15845249_16075339|GENSCAN_predicted_peptide_4|323_aa
MSQREPLVKNGRHWTCGAEAGGFCGHAGKYTSYTADQQHSILIGANPIVNCARRGSTLCA
PYENLMHHPPPLVCGNIVFHEAGPWCQKERYKLTVTDGILLNRYKSLVTGTRARGVIAVL
WVLAFGIGLTPFLGWNSKDSATNNCTEPWDGTTNESCCLVKCLFENVVPMSYMVYFNFFG
CVLPPLLIMLVIYIKIFLVACRQLQRTELMDHSRTTLQREIHAAKSLAMIVGIFALCWLP
VHAVNCVTLFQPAQGKNKPKWAMNMAILLSHANSVVNPIVYAYRNRDFRYTFHKIISRYL
LCQADVKSGNGQAGVQPALGVGL

>gi568815581f:15845249_16075339|GENSCAN_predicted_CDS_4|972_bp
atgagccagagggagccattggttaagaatggcaggcactggacgtgtggagccgaggct
ggggggttctgcggccatgctgggaagtatacgtcttacactgcagatcagcagcattcg
attctcataggagctaaccctattgtgaactgtgcacgcaggggatctacgctgtgcgct
ccttatgagaatctaatgcatcaccccccgcccctggtctgtggaaacattgtcttccat
gaagctggtccctggtgccagaaagagcgctataaactgaccgtaacagatggtattctt
ttaaacaggtataaaagtttggtcacggggacccgagcaagaggggtcattgctgtcctc
tgggtccttgcctttggcatcggattgactccattcctggggtggaacagtaaagacagt
gccaccaacaactgcacagaaccctgggatggaaccacgaatgaaagctgctgccttgtg
aagtgtctctttgagaatgtggtccccatgagctacatggtatatttcaatttctttggg
tgtgttctgcccccactgcttataatgctggtgatctacattaagatcttcctggtggcc
tgcaggcagcttcagcgcactgagctgatggaccactcgaggaccaccctccagcgggag
atccatgcagccaagtcactggccatgattgtggggatttttgccctgtgctggttacct
gtgcatgctgttaactgtgtcactcttttccagccagctcagggtaaaaataagcccaag
tgggcaatgaatatggccattcttctgtcacatgccaattcagttgtcaatcccattgtc
tatgcttaccggaaccgagacttccgctacacttttcacaaaattatctccaggtatctt
ctctgccaagcagatgtcaagagtgggaatggtcaggctggggtacagcctgctctcggt
gtgggcctatga

>gi568815581f:15845249_16075339|GENSCAN_predicted_peptide_5|406_aa
MFRLLSWSLGRGFLRAAGRRCRGCSARLLPGLAGGPGPEVQVPPSRVAPHGRGPGLLPLL
AALAWFSRPAAAEEEEQQGADGAAAEDGADEAEAEIIQLLKRAKVRRLRALRPAERGSLC
ERGLGVAAHYSLRLAEEWMEAPRLSIMKDEPEEAELILHDALRLAYQTDNKKAITYTYDL
AEQLFKATMSYLLGGGMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKIE
REKELAEDIMSVEEKANTHLLLGMCLDACARYLLFSKQPSQAQRMYEKALQISEEIQGER
HPQTIVLMSDLATTLDAQGRFDEAYIYMQRASDLARQINHPELHMVLSNLAAVLMHRERY
TQAKEIYQEALKQAKLKKDEISVQHIREELAELSKKSRPLTNSVKL

>gi568815581f:15845249_16075339|GENSCAN_predicted_CDS_5|1221_bp
atgttccggctcctgagctggagcctgggccgaggcttcctgcgggccgcggggcggcgg
tgccggggctgctccgcgcgcctgctcccggggctggcaggaggtccggggcccgaggtg
caggtgccgccatcccgagtcgcgccgcacggccggggcccaggcctgctgccgctgctg
gcagcgctcgcctggttctcgaggcccgctgcggcagaggaggaggagcagcagggagcc
gacggggccgctgccgaggacggggcggacgaggccgaggcagagatcatccagctgctg
aagcgagccaaggtgaggcggctccgggccctgcgcccggccgagcgcggtagcctttgt
gagcggggtcttggcgttgctgcgcattactctctccgcctcgccgaagagtggatggag
gctccgcggttgagcattatgaaagatgagccagaagaggctgagttaattttgcatgac
gctcttcgtctcgcctatcagactgataacaagaaggccatcacttacacttatgatttg
gctgaacaactttttaaagcaacaatgagttacctccttggagggggcatgaagcaggag
gacaatgcaataattgaaatttccctaaagctggccagtatctatgctgcgcagaacaga
caggaatttgctgttgctggctatgaattctgcatttcaactctagaggaaaaaattgaa
agagaaaaggaattagcagaagacattatgtcagtggaagagaaagccaatacccacctc
ctcttgggcatgtgcttagacgcctgtgctcgctaccttctgttctccaagcagccgtca
caggcacaaaggatgtatgaaaaagctctgcagatttctgaagaaatacaaggagaaaga
cacccacagaccattgtgctgatgagtgacctggctactaccctggatgcacagggccgc
tttgatgaggcctatatttatatgcaaagggcatcagatctggcaagacagataaatcat
cctgagctacacatggtactcagtaatctagctgcagttttgatgcacagagaacgatat
acacaagcaaaagagatctaccaggaagcactgaagcaagcaaagctgaaaaaagatgaa
atttctgtacaacacatcagggaagagttggctgagctgtcaaagaaaagtagacctttg
acaaattctgtcaagctctaa

>gi568815581f:15845249_16075339|GENSCAN_predicted_peptide_6|795_aa
XTPRATTESFEDGLKYPKQIKRESPPIRAFEGAITKGKPYDGITTIKEMGRSIHEIPRQD
ILTQESRKTPEVVQSTRPIIEGSISQGTPIKFDNNSGQSAIKHNVKSLITGPSKLSRGMP
PLEIVPENIKVVERGKYEDVKAGETVRSRHTSVRQLSPTPGYPSQYQLYAMENTRQTILN
DYITSQQMQVNLRPDVARGLSPREQPLGLPYPATRGHPTHLAAAASAEREREREREKERE
RERIAAASSDLYLRPGSEQPGRPGSHGYVRSPSPSVRTQETMLQQRPSVFQGTNGTSVIT
PLDPTAQLRIMPLPAGGPSISQGLPASRYNTAADALAALVDAAASAPQMDVSKTKESKHE
AARLEENLRSRSAAVSEQQQLEQKTLEVEKRSVQCLYTSSAFPSGKPQPHSSVVYSEAGK
DKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDKDARERGSQSSDSSSSYDPTR
QYEGPLHHYRPQQESPSPQQQLPPSSQAEGMGQVPRTHRLITLADHICVPVVHEKQDSLL
LLSQRGAEPAEQRNDARSPGSISYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDM
AGAAAVEWAGSHWCSTSCWSRSTSPYIVDEAPNVDIGQGHCKQAGPKRFNIYTSCFNEGI
DLILRDGHLIVMQSSVSSRGHSFADPASNLGLEDIIRKALMGSFDDKVEDHGVVMSQPMG
VVPGTANTSVVTSGSTQFPYNPLTMRMLSSTPPTPIACAPSAVNQAAPHQQNRIWEREPA
PLLSAQYETLSDSDD

>gi568815581f:15845249_16075339|GENSCAN_predicted_CDS_6|2388_bp
nggacaccaagagcaacaactgaaagctttgaagatggccttaaatatcccaaacaaatt
aaaagggaaagtcctcccatacgagcatttgaaggtgccattaccaaaggaaaaccatat
gatggcatcaccaccatcaaagaaatggggcgttccattcatgagattccaaggcaagat
attttaactcaggaaagtcggaaaactccagaagtggtccagagcacacggccgataatt
gagggttccatttcccagggcacaccaataaagtttgacaacaactcaggtcaatctgcc
atcaaacacaatgtcaaatccttaatcacggggcctagcaaactatcccgtggaatgcct
ccgctggaaattgtgccagagaacataaaagtggtagaacggggaaaatatgaggatgtg
aaagcaggcgagaccgtgcgttcccggcacacgtcagtgagacagctttcaccaactcca
ggttacccaagtcagtatcagctttacgcaatggagaacacaagacagacaatcttaaat
gattacattacctcacaacagatgcaagtgaacttgcgtccagatgtggccagaggactc
tccccaagagagcagccactgggtctcccatacccagcaacgagaggacacccaacacac
cttgcagctgctgcaagtgctgagagggaacgggaacgggagcgggagaaggagcgggag
cgggaacggattgctgcagcttcctccgacctctacctgcggccaggctcagaacagcct
ggccgacctggcagtcatggatatgttcgctccccttccccttcagtaagaactcaggag
accatgttgcaacagagacccagtgttttccaaggaaccaatggaaccagtgtaatcaca
cctttggatccaactgctcagctacgaatcatgccactgcctgctgggggcccttcaata
agccaaggcctgccagcctcccgttacaacactgctgcggatgccctggctgctcttgtg
gatgctgcagcttctgcaccccagatggatgtgtccaaaacaaaagagagtaagcatgaa
gctgccaggttagaagaaaatttgagaagcaggtcagcagcagttagtgaacagcagcag
ctagagcagaaaaccctggaggtggagaagagatctgttcagtgtttatacacttcttca
gcctttccaagtggcaagccccagcctcattcttcagtagtttattctgaggctgggaaa
gataaagggcctcctccaaaatccagatatgaggaagagctaaggaccagagggaagact
accattactgcagctaacttcatagacgtgatcatcacccggcaaattgcctcggacaag
gatgcgagggaacgtggctctcaaagttcagactcttctagtagctatgatcctaccaga
caatatgaaggaccattacatcactatcgaccacagcaggaatcaccatctccccaacaa
cagctgcccccttcttcacaggcagagggaatggggcaagtgcccaggacccatcggctg
atcacacttgctgatcacatctgtgttccggttgtgcatgagaaacaggacagcttgctg
ctcttgtctcagaggggcgcagagcctgcagagcagaggaatgatgcccgctcaccaggg
agtataagctacttgccttcattcttcaccaagcttgaaaatacatcacccatggttaaa
tcaaagaagcaggagatttttcgtaagttgaactcctctggtggaggtgactctgatatg
gctggagcagcagcagtggagtgggcaggatcccactggtgcagcaccagctgctggagc
aggtccaccagcccctacattgtagatgaggctcccaatgttgacattggccagggccat
tgcaaacaagctggaccaaaaaggttcaacatttacaccagctgctttaacgagggcatt
gatcttatcctccgtgatggtcacctcattgtcatgcagagctcagttagctctagaggc
cattcttttgctgatcctgccagtaatcttgggctggaagacattatcaggaaggctctc
atgggaagctttgatgacaaagttgaggatcatggagttgtcatgtcccagcctatggga
gtagtgcctggtactgccaacacctcagttgtgaccagtggctcaactcagtttccttat
aaccctctgactatgcggatgctcagcagtactccaccaacaccgattgcatgtgctccc
tctgcggtgaaccaagcagctcctcaccaacagaacaggatctgggagcgagagcctgcc
ccactgctctcagcacagtacgagaccctgtcggatagtgatgactga