GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:26:05

Sequence gi568815578f:36478775_36691428 : 212654 bp : 48.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  17931  18292  362  1  2  111   30   275 0.764  18.94
 1.02 Intr +  20814  20902   89  2  2   39  115    89 0.920   5.47
 1.03 Intr +  21425  21837  413  2  2   95   98   451 0.519  40.63
 1.04 Intr +  45476  45567   92  0  2   87   97    79 0.834   8.41
 1.05 Intr +  47077  47232  156  0  0   95  105   268 0.998  29.41
 1.06 Term +  48039  48257  219  2  0   59   53   310 0.996  21.64
 1.07 PlyA +  49840  49845    6                               1.05

 2.00 Prom +  53660  53699   40                              -5.76
 2.01 Init +  62844  62912   69  2  0   51   42    54 0.134  -3.04
 2.02 Intr +  65809  65896   88  0  1   65   65    77 0.634   2.64
 2.03 Intr +  66085  66294  210  2  0   97   80   433 0.877  42.28
 2.04 Intr +  69258  69419  162  1  0   61   69   382 0.998  33.55
 2.05 Term +  70303  70475  173  2  2  129   47   404 0.999  38.39
 2.06 PlyA +  75179  75184    6                               1.05

 3.00 Prom +  83067  83106   40                              -8.36
 3.01 Init + 100001 100192  192  1  0  101   80   313 0.931  30.77
 3.02 Term + 112136 112657  522  1  0   60   48   372 0.452  24.68
 3.03 PlyA + 115144 115149    6                               1.05

 4.00 Prom + 115674 115713   40                              -4.66
 4.01 Init + 127178 127291  114  1  0   70  102   119 0.934  11.75
 4.02 Intr + 128941 129044  104  0  2  109  110    48 0.999   8.07
 4.03 Intr + 130827 130956  130  0  1   70   80   143 0.280  12.40
 4.04 Term + 133236 133277   42  2  0  100   45    24 0.150  -3.54
 4.05 PlyA + 133759 133764    6                               1.05

 5.20 PlyA - 134089 134084    6                               1.05
 5.19 Term - 135212 135092  121  1  1  107   47   104 0.997   6.15
 5.18 Intr - 135663 135531  133  1  1   27  103   117 0.665   6.80
 5.17 Intr - 136600 136451  150  2  0  128   60    70 0.653   8.33
 5.16 Intr - 153924 153821  104  2  2  118  105   129 0.945  17.42
 5.15 Intr - 154855 154769   87  0  0   91   92    79 0.995   7.69
 5.14 Intr - 155815 155716  100  2  1   72   80   117 0.992   8.47
 5.13 Intr - 161627 161593   35  1  2   52   64    34 0.109  -4.73
 5.12 Intr - 162604 162471  134  1  2  108   96    82 0.388  10.44
 5.11 Intr - 174927 174758  170  1  2   91   22   104 0.183   3.77
 5.10 Intr - 176065 176027   39  2  0   85   82    50 0.656   2.30
 5.09 Intr - 177637 177586   52  1  1   91   79    60 0.992   3.88
 5.08 Intr - 177758 177723   36  2  0  124  110     9 0.913   5.16
 5.07 Intr - 186323 186272   52  1  1  106  103    -4 0.968   1.81
 5.06 Intr - 186527 186462   66  1  0   78  106    44 0.881   3.22
 5.05 Intr - 187618 187515  104  1  2   81   15   133 0.820   4.27
 5.04 Intr - 192623 192567   57  2  0   73  111    26 0.009   2.48
 5.03 Intr - 202128 202042   87  0  0   81  106    48 0.502   6.07
 5.02 Intr - 203804 203744   61  1  1   78   92    41 0.741   2.24
 5.01 Init - 205685 205639   47  2  2   89  100    26 0.718   4.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 142294 142551  258  0  0   81   48   230 0.846  13.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:36478775_36691428|GENSCAN_predicted_peptide_1|443_aa
XSSCLVAYKKTPPPVPPRTTSKPFISVTVQSSTESAQDTYLDSQDHKSEVTSQSGLSNSS
DSLDSSTRPPSVTRGGVAPAPEAPEPPPKHAALKSEQGTLTSSESHPEAAPKRKLSSIGI
QVDCIQPVPKEEPSPATKFQSIGVQVEDDWRSSVPSHSMSSRRDTDSDTQDANDSSCKSS
ERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDNSDPALEASSLPPPDPWLETSSS
SPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQMDKETKENNLSEEVLGKVLSAVGSA
QLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANS
WQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASDASDKQRQEARKRLLAAKRAASV
RQNSATESADSIEIYVPEAQTRL

>gi568815578f:36478775_36691428|GENSCAN_predicted_CDS_1|1332_bp
ngttcatcatgcctagtggcgtataagaagaccccgccaccggtccctccacgcaccact
tcaaagccgttcatctcagtcacagtccagagcagtactgagtctgcccaggacacctac
ctggacagccaggaccacaagagcgaggtgactagccagtcgggcctgagcaactcgtcg
gacagcctggacagcagtacccgaccgcccagcgtgacacggggtggagtcgccccagcc
cctgaggccccagagccacccccaaaacatgcagctctgaaaagtgaacaagggacgctg
accagctctgagtcccaccccgaggccgcccccaaaaggaaactgtcatcgataggaata
caagttgactgcattcagccagtgccaaaagaggagcccagtcccgctaccaaattccag
tccatcggggttcaggtagaggacgactggcgaagcagcgtcccctctcacagtatgtcc
tcccgacgggacacagactcggatacccaggatgccaatgactcaagctgtaagtcatct
gagaggagcctcccggactgtacccctcaccccaactccatcagcatcgatgccggtccc
cggcaggcccccaagattgcccagatcaagcgcaacctctcctatggagacaacagcgac
cctgccctagaggcgtcctcgctgcccccacccgacccctggctcgagacctcctccagc
tccccagcagagccggcacagccaggggcctgccgccgagacggctactggttcctaaag
ctactgcaggcagaaacagagcggctggaaggctggtgctgccagatggacaaggagacc
aaagagaacaacctctctgaagaagtcttaggaaaagtcctcagtgctgtgggcagtgcc
cagctactgatgtcccagaaattccagcagttccggggcctctgtgagcaaaacttgaac
cctgatgccaacccacgccccacagcccaggacctggcagggttctgggacctgctacag
ctgtccatcgaggatatcagcatgaagttcgatgaactctaccacctcaaggccaacagc
tggcagctggtggagacccccgagaagaggaaggaagagaagaaaccaccccctccggtc
ccaaagaagccagccaaatccaagccggcagtgagccgcgacaaggcctcagacgccagc
gacaagcagcgccaggaggcccgcaagagactcctggcggccaagcgggcagcttctgtg
cggcagaactcagccaccgagagcgcagacagcatcgagatttatgtcccggaggcccag
accaggctctga

>gi568815578f:36478775_36691428|GENSCAN_predicted_peptide_2|233_aa
MRGGPGPTRLSRGAKAGPTDWDVELSGTESVNPYCWALLMSPVPDEDSRAQRGKPHPPEA
KMSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLA
SLGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIH
EDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD

>gi568815578f:36478775_36691428|GENSCAN_predicted_CDS_2|702_bp
atgagaggtggcccgggcccgacccggctgtcacggggggcaaaggcgggccccacggac
tgggacgtggagctctcgggcactgagtcagttaatccctactgctgggcactcctcatg
tctccagtcccagatgaagactctcgggctcagagagggaagccccacccaccagaagcc
aagatgtccagcaagcgggccaaagccaagaccaccaagaagcggccacagcgggccaca
tccaatgtcttcgcaatgtttgaccagtcccagatccaggagtttaaggaggctttcaac
atgattgaccagaaccgtgatggcttcattgacaaggaggacctgcacgacatgctggcc
tcgctggggaagaaccccacagacgaatacctggagggcatgatgagcgaggccccgggg
cccatcaacttcaccatgttcctcaccatgtttggggagaagctgaacggcacggacccc
gaggatgtgattcgcaacgcctttgcctgcttcgacgaggaagcctcaggtttcatccat
gaggaccacctccgggagctgctcaccaccatgggtgaccgcttcacagatgaggaagtg
gacgagatgtaccgggaggcacccattgataagaaaggcaacttcaactacgtggagttc
acccgcatcctcaaacatggcgccaaggataaagacgactag

>gi568815578f:36478775_36691428|GENSCAN_predicted_peptide_3|237_aa
MSDSDLGEDEGLLSLAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNL
SVLQICNWFINARRRLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPSVLAVSVPA
PTNVLSLSVCSMPLHSGQGEKPAAPFPRGELESPKPLVTPGSTLTLLTRAEAGSPTGGLF
NTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQKQQDPSLPLLHTPIPLVSENPQ

>gi568815578f:36478775_36691428|GENSCAN_predicted_CDS_3|714_bp
atgtcggacagtgatctaggtgaggacgaaggcctcctctccctggcgggcaaaaggaag
cgcagggggaacctgcccaaggagtcggtgaagatcctccgggactggctgtacttgcac
cgctacaacgcctacccctcagagcaggagaagctgagcctttctggacagaccaacctg
tcagtgctgcaaatatgtaactggttcatcaatgcccggcggcggcttctcccagacatg
cttcggaaggatggcaaagaccctaatcagtttaccatttcccgccgcgggggtaaggcc
tcagatgtggccctcccccgtggcagcagcccctcagtgctggctgtgtctgtcccagcc
cccaccaatgtgctctccctgtctgtgtgctccatgccgcttcactcaggccagggggaa
aagccagcagcccctttcccacgtggggagctggagtctcccaagcccctggtgacccct
ggtagcacacttactctgctgaccagggctgaggctggaagccccacaggtggactcttc
aacacgccaccacccacacccccagagcaggacaaagaggacttcagcagcttccagctg
ctggtggaggtggcgctacagagggctgctgagatggagcttcagaagcagcaggaccca
tcactcccattactgcacactcccatccctttagtctctgaaaatccccagtag

>gi568815578f:36478775_36691428|GENSCAN_predicted_peptide_4|129_aa
MSGGRRKEEPPQPQLANGALKVSVWSKVLRSDAAWEDKDEFLDVIYWFRQIIAVVLGVIW
GVLPLRGFLGIAGFCLINAGVLYLYFSNYLQIDEEEYGGTWELTKEGFMTSFALFMVIWI
IFYTAIHYD

>gi568815578f:36478775_36691428|GENSCAN_predicted_CDS_4|390_bp
atgagcggcgggcggcggaaggaggagccgcctcagccgcagctggccaacggggccctc
aaagtctccgtctggagtaaggtgctgcggagcgacgcggcctgggaggataaggatgaa
tttttagatgtgatctactggttccgacagatcattgctgtggtcctgggtgtcatttgg
ggagttttgccattacgagggttcttgggaatagcaggattctgcctgatcaatgcagga
gtcctgtacctctacttcagcaattacctacagattgatgaggaagaatatggtggcacg
tgggagctcacgaaggaagggtttatgacctcttttgccttgttcatggtcatttggatc
atcttttacactgccatccattatgactga

>gi568815578f:36478775_36691428|GENSCAN_predicted_peptide_5|544_aa
MDELAEMLPPVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWID
WAASKLSGLTTNVVDIILAHHFGQEELQANLDLIQTYRMHIAQDINQDNLQLFLNSYNGR
RDLEIERPILGQNDNKSKTLKCSTLLVVGDNSPAVEAVMADCGGLPQVVQPGKLTEAFKY
FLQGMGYIPYVQLSHLSTESVPSASMTRLARSRTHSTSSSLGSGESPFSRSVTSNQSDGT
QESCESPDVLDRHQTMEISLDDVLLSALLRNNGKSAQQKKISAKPKLEFLCPRPGTCDHG
SRKFCYTVLVDPRERSKATAVALGSFPAGGPAELSLRLGEPLTIVSEDGDWWTVLSEVSG
REYNIPSVHVAKVSHGWLYEGLSREKAEELLLLPGNPGGAFLIRESQTRRGSYSLSVRLS
RPASWDRIRHYRIHCLDNGWLYISPRLTFPSLQALVDHYSELADDICCLLKEPCVLQRAG
PLPGKDIPLPVTVQRTPLNWKELDSSLLFSEAATGEESLLSEGLRESLSFYISLNDEAVS
LDDA

>gi568815578f:36478775_36691428|GENSCAN_predicted_CDS_5|1635_bp
atggatgagctggctgaaatgctgcctcctgttcttacccacctaagcctgaaaagcatc
attggaattggagttggagctggagcttacatcctcagcagatttgcactcaaccatcca
gagcttgtggaaggccttgtgctcattaatgttgacccttgcgctaaaggctggattgac
tgggcagcttccaaactctctggcctgacaaccaatgttgtggacattattttggctcat
cactttgggcaggaagagttacaggccaacctggacctgatccaaacctacagaatgcat
attgcccaagacatcaaccaagacaacctgcagctcttcttgaattcctacaatggacgc
agagacctggagatcgaaagacccatactgggccaaaatgataacaaatcaaaaacatta
aagtgttctactttactggtggtaggggacaattcgcctgcagttgaggctgtgatggcg
gactgtgggggactgccccaggtagttcagcctgggaagctcaccgaggccttcaagtac
tttttgcagggaatgggctacatcccgtatgtgcagctcagtcacctgagcaccgagtca
gtaccatctgccagcatgactcggctcgcccgatcacgaacccactcaacctcgagtagc
ctcggctctggagaaagtcccttcagccggtctgtcaccagcaatcagtcagatggaact
caagaatcctgtgagtcccctgatgtcctggacagacaccagaccatggagatttccctc
gatgatgtgcttctgagtgctctgctgaggaacaatgggaagtctgcccagcagaagaaa
atctctgccaagcccaagcttgagttcctctgtccaaggccagggacctgtgaccatgga
agcagaaagttctgctatactgtcctagtggacccgagagagagaagcaaggccacagcc
gtggccctgggcagtttcccggcaggtggcccggccgagctgtcgctgagactcggggag
ccattgaccatcgtctctgaggatggagactggtggacggtgctgtctgaagtctcaggc
agagagtataacatccccagcgtccacgtggccaaagtctcccatgggtggctgtatgag
ggcctgagcagggagaaagcagaggaactgctgttgttacctgggaaccctggaggggcc
ttcctcatccgggagagccagaccaggagaggctcttactctctgtcagtccgcctcagc
cgccctgcatcctgggaccggatcagacactacaggatccactgccttgacaatggctgg
ctgtacatctcaccgcgcctcaccttcccctcactccaggccctggtggaccattactct
gagctggcggatgacatctgctgcctactcaaggagccctgtgtcctgcagagggctggc
ccgctccctggcaaggatatacccctacctgtgactgtgcagaggacaccactcaactgg
aaagagctggacagctccctcctgttttctgaagctgccacaggggaggagtctcttctc
agtgagggtctccgggagtccctcagcttctacatcagcctgaatgacgaggctgtctct
ttggatgatgcctag