Result of FASTA (omim) for pF1KB8901
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8901, 233 aa
  1>>>pF1KB8901 233 - 233 aa - 233 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2905+/-0.000362; mu= 14.3089+/- 0.023
 mean_var=66.2837+/-13.123, 0's: 0 Z-trim(113.6): 64  B-trim: 361 in 2/55
 Lambda= 0.157533
 statistics sampled from 23011 (23077) to 23011 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.654), E-opt: 0.2 (0.271), width:  16
 Scan time:  5.510

The best scores are:                                      opt bits E(85289)
XP_016883482 (OMIM: 600039) PREDICTED: bcl-2-like  ( 233) 1550 360.9   1e-99
NP_001309171 (OMIM: 600039) bcl-2-like protein 1 i ( 233) 1550 360.9   1e-99
NP_001304850 (OMIM: 600039) bcl-2-like protein 1 i ( 233) 1550 360.9   1e-99
NP_001309169 (OMIM: 600039) bcl-2-like protein 1 i ( 233) 1550 360.9   1e-99
NP_612815 (OMIM: 600039) bcl-2-like protein 1 isof ( 233) 1550 360.9   1e-99
XP_011527266 (OMIM: 600039) PREDICTED: bcl-2-like  ( 233) 1550 360.9   1e-99
NP_001304848 (OMIM: 600039) bcl-2-like protein 1 i ( 233) 1550 360.9   1e-99
NP_001309168 (OMIM: 600039) bcl-2-like protein 1 i ( 233) 1550 360.9   1e-99
NP_001304849 (OMIM: 600039) bcl-2-like protein 1 i ( 233) 1550 360.9   1e-99
NP_001182 (OMIM: 600039) bcl-2-like protein 1 isof ( 170)  816 194.0 1.3e-49
NP_000624 (OMIM: 151430) apoptosis regulator Bcl-2 ( 239)  599 144.8 1.2e-34
XP_011524437 (OMIM: 151430) PREDICTED: apoptosis r ( 224)  569 137.9 1.3e-32
XP_016881406 (OMIM: 151430) PREDICTED: apoptosis r ( 198)  551 133.8   2e-31
NP_000648 (OMIM: 151430) apoptosis regulator Bcl-2 ( 205)  551 133.8 2.1e-31
NP_001186768 (OMIM: 601931) bcl-2-like protein 2 [ ( 193)  530 129.0 5.4e-30
NP_004041 (OMIM: 601931) bcl-2-like protein 2 [Hom ( 193)  530 129.0 5.4e-30
NP_620116 (OMIM: 600040) apoptosis regulator BAX i ( 192)  219 58.4   1e-08
XP_011513082 (OMIM: 600516) PREDICTED: bcl-2 homol ( 152)  215 57.4 1.6e-08
XP_011513081 (OMIM: 600516) PREDICTED: bcl-2 homol ( 211)  215 57.5 2.1e-08
NP_001179 (OMIM: 600516) bcl-2 homologous antagoni ( 211)  215 57.5 2.1e-08
XP_016882566 (OMIM: 600040) PREDICTED: apoptosis r ( 173)  213 57.0 2.4e-08
NP_620119 (OMIM: 600040) apoptosis regulator BAX i ( 179)  206 55.4 7.5e-08
NP_001278360 (OMIM: 600040) apoptosis regulator BA ( 114)  202 54.4 9.7e-08
NP_620118 (OMIM: 600040) apoptosis regulator BAX i ( 143)  202 54.4 1.2e-07
NP_004315 (OMIM: 600040) apoptosis regulator BAX i ( 218)  201 54.3 1.9e-07
NP_001278357 (OMIM: 600040) apoptosis regulator BA ( 221)  201 54.3   2e-07
NP_001278358 (OMIM: 600040) apoptosis regulator BA ( 181)  192 52.2 6.9e-07
NP_001278359 (OMIM: 600040) apoptosis regulator BA ( 140)  184 50.3   2e-06
NP_001184249 (OMIM: 159552) induced myeloid leukem ( 197)  185 50.6 2.2e-06
XP_011509998 (OMIM: 605404) PREDICTED: bcl-2-relat ( 212)  182 50.0 3.8e-06
NP_115904 (OMIM: 605404) bcl-2-related ovarian kil ( 212)  182 50.0 3.8e-06
NP_068779 (OMIM: 159552) induced myeloid leukemia  ( 350)  183 50.3 4.9e-06
NP_004040 (OMIM: 601056) bcl-2-related protein A1  ( 175)  172 47.7 1.6e-05
NP_001108207 (OMIM: 601056) bcl-2-related protein  ( 163)  167 46.5 3.2e-05
XP_016860264 (OMIM: 605404) PREDICTED: bcl-2-relat ( 134)  150 42.6  0.0004
XP_016860265 (OMIM: 605404) PREDICTED: bcl-2-relat ( 134)  150 42.6  0.0004
NP_620048 (OMIM: 606126) apoptosis facilitator Bcl ( 327)  152 43.3 0.00061
XP_016875452 (OMIM: 606126) PREDICTED: apoptosis f ( 327)  152 43.3 0.00061
XP_011519150 (OMIM: 606126) PREDICTED: apoptosis f ( 327)  152 43.3 0.00061
XP_006719214 (OMIM: 606126) PREDICTED: apoptosis f ( 327)  152 43.3 0.00061
XP_011519151 (OMIM: 606126) PREDICTED: apoptosis f ( 327)  152 43.3 0.00061
NP_620049 (OMIM: 606126) apoptosis facilitator Bcl ( 327)  152 43.3 0.00061


>>XP_016883482 (OMIM: 600039) PREDICTED: bcl-2-like prot  (233 aa)
 initn: 1550 init1: 1550 opt: 1550  Z-score: 1911.0  bits: 360.9 E(85289): 1e-99
Smith-Waterman score: 1550; 100.0% identity (100.0% similar) in 233 aa overlap (1-233:1-233)

               10        20        30        40        50        60
pF1KB8 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
              130       140       150       160       170       180

              190       200       210       220       230   
pF1KB8 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
              190       200       210       220       230   

>>NP_001309171 (OMIM: 600039) bcl-2-like protein 1 isofo  (233 aa)
 initn: 1550 init1: 1550 opt: 1550  Z-score: 1911.0  bits: 360.9 E(85289): 1e-99
Smith-Waterman score: 1550; 100.0% identity (100.0% similar) in 233 aa overlap (1-233:1-233)

               10        20        30        40        50        60
pF1KB8 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
              130       140       150       160       170       180

              190       200       210       220       230   
pF1KB8 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
              190       200       210       220       230   

>>NP_001304850 (OMIM: 600039) bcl-2-like protein 1 isofo  (233 aa)
 initn: 1550 init1: 1550 opt: 1550  Z-score: 1911.0  bits: 360.9 E(85289): 1e-99
Smith-Waterman score: 1550; 100.0% identity (100.0% similar) in 233 aa overlap (1-233:1-233)

               10        20        30        40        50        60
pF1KB8 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
              130       140       150       160       170       180

              190       200       210       220       230   
pF1KB8 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
              190       200       210       220       230   

>>NP_001309169 (OMIM: 600039) bcl-2-like protein 1 isofo  (233 aa)
 initn: 1550 init1: 1550 opt: 1550  Z-score: 1911.0  bits: 360.9 E(85289): 1e-99
Smith-Waterman score: 1550; 100.0% identity (100.0% similar) in 233 aa overlap (1-233:1-233)

               10        20        30        40        50        60
pF1KB8 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
              130       140       150       160       170       180

              190       200       210       220       230   
pF1KB8 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
              190       200       210       220       230   

>>NP_612815 (OMIM: 600039) bcl-2-like protein 1 isoform   (233 aa)
 initn: 1550 init1: 1550 opt: 1550  Z-score: 1911.0  bits: 360.9 E(85289): 1e-99
Smith-Waterman score: 1550; 100.0% identity (100.0% similar) in 233 aa overlap (1-233:1-233)

               10        20        30        40        50        60
pF1KB8 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
              130       140       150       160       170       180

              190       200       210       220       230   
pF1KB8 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_612 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
              190       200       210       220       230   

>>XP_011527266 (OMIM: 600039) PREDICTED: bcl-2-like prot  (233 aa)
 initn: 1550 init1: 1550 opt: 1550  Z-score: 1911.0  bits: 360.9 E(85289): 1e-99
Smith-Waterman score: 1550; 100.0% identity (100.0% similar) in 233 aa overlap (1-233:1-233)

               10        20        30        40        50        60
pF1KB8 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
              130       140       150       160       170       180

              190       200       210       220       230   
pF1KB8 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
              190       200       210       220       230   

>>NP_001304848 (OMIM: 600039) bcl-2-like protein 1 isofo  (233 aa)
 initn: 1550 init1: 1550 opt: 1550  Z-score: 1911.0  bits: 360.9 E(85289): 1e-99
Smith-Waterman score: 1550; 100.0% identity (100.0% similar) in 233 aa overlap (1-233:1-233)

               10        20        30        40        50        60
pF1KB8 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
              130       140       150       160       170       180

              190       200       210       220       230   
pF1KB8 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
              190       200       210       220       230   

>>NP_001309168 (OMIM: 600039) bcl-2-like protein 1 isofo  (233 aa)
 initn: 1550 init1: 1550 opt: 1550  Z-score: 1911.0  bits: 360.9 E(85289): 1e-99
Smith-Waterman score: 1550; 100.0% identity (100.0% similar) in 233 aa overlap (1-233:1-233)

               10        20        30        40        50        60
pF1KB8 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
              130       140       150       160       170       180

              190       200       210       220       230   
pF1KB8 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
              190       200       210       220       230   

>>NP_001304849 (OMIM: 600039) bcl-2-like protein 1 isofo  (233 aa)
 initn: 1550 init1: 1550 opt: 1550  Z-score: 1911.0  bits: 360.9 E(85289): 1e-99
Smith-Waterman score: 1550; 100.0% identity (100.0% similar) in 233 aa overlap (1-233:1-233)

               10        20        30        40        50        60
pF1KB8 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
              130       140       150       160       170       180

              190       200       210       220       230   
pF1KB8 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
              190       200       210       220       230   

>>NP_001182 (OMIM: 600039) bcl-2-like protein 1 isoform   (170 aa)
 initn: 1093 init1: 816 opt: 816  Z-score: 1011.5  bits: 194.0 E(85289): 1.3e-49
Smith-Waterman score: 971; 73.0% identity (73.0% similar) in 233 aa overlap (1-233:1-170)

               10        20        30        40        50        60
pF1KB8 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEP
       :::::                                                       
NP_001 QSFEQ-------------------------------------------------------
                                                                   

              190       200       210       220       230   
pF1KB8 WIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
               :::::::::::::::::::::::::::::::::::::::::::::
NP_001 --------DTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
                 130       140       150       160       170




233 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 16:25:07 2016 done: Fri Nov  4 16:25:08 2016
 Total Scan time:  5.510 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com