GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:20:41

Sequence gi568815594r:100087680_100289983 : 202304 bp : 37.93% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5510   5637  128  0  2   57   81    94 0.154   5.08
 1.02 Term +   7686   7790  105  2  0   64   48    64 0.106  -2.57
 1.03 PlyA +   8955   8960    6                               1.05

 2.04 PlyA -   9739   9734    6                               1.05
 2.03 Term -  10582  10325  258  1  0   62   46   166 0.563   4.37
 2.02 Intr -  15673  15552  122  2  2   53   96   115 0.428   8.09
 2.01 Init -  35429  35381   49  2  1   46   81    87 0.567   4.96
 2.00 Prom -  35562  35523   40                              -2.95

 3.03 PlyA -  35673  35668    6                               1.05
 3.02 Term -  41541  41313  229  2  1   52   47   148 0.576   2.22
 3.01 Init -  56282  56188   95  2  2   38  110    86 0.162   5.70
 3.00 Prom -  65161  65122   40                              -4.75

 4.02 PlyA -  65605  65600    6                               1.05
 4.01 Sngl -  67479  67144  336  0  0   73   44   207 0.848  10.58
 4.00 Prom -  67533  67494   40                              -4.25

 5.03 PlyA -  67650  67645    6                               1.05
 5.02 Term -  69530  68927  604  1  1   14   35   246 0.188   4.90
 5.01 Init -  83773  83622  152  1  2   77   30   138 0.072   6.46
 5.00 Prom -  84664  84625   40                              -4.85

 6.06 PlyA -  84991  84986    6                               1.05
 6.05 Term -  91899  91666  234  0  0  -47   38   266 0.050   3.44
 6.04 Intr - 100488 100232  257  1  2   58   48   176 0.074   6.84
 6.03 Intr - 102175 102111   65  0  2  100   35    15 0.359  -5.16
 6.02 Intr - 102506 102214  293  2  2   56   89   198 0.601  11.71
 6.01 Init - 103217 102624  594  2  0   42   99   271 0.193  18.90
 6.00 Prom - 106112 106073   40                             -11.14

 7.00 Prom + 106660 106699   40                              -8.15
 7.01 Init + 107765 107864  100  1  1   60   68   139 0.601   8.68
 7.02 Intr + 107891 107992  102  0  0   50   68   118 0.962   5.23
 7.03 Intr + 108019 108123  105  2  0   50   70    89 0.813   2.57
 7.04 Intr + 108755 108939  185  0  2   56   27   230 0.711  12.29
 7.05 Intr + 113476 113551   76  0  1   31   92    67 0.437  -0.43
 7.06 Term + 123674 123744   71  0  2  128   48    63 0.545   3.42
 7.07 PlyA + 125778 125783    6                               1.05

 8.05 PlyA - 126642 126637    6                               1.05
 8.04 Term - 135513 135317  197  1  2   75   48   137 0.422   4.99
 8.03 Intr - 142949 142828  122  1  2  101  111    14 0.166   4.22
 8.02 Intr - 153958 153791  168  0  0   74   81   103 0.298   6.34
 8.01 Init - 169041 168992   50  0  2   64   97    78 0.664   6.77
 8.00 Prom - 171885 171846   40                              -3.65

 9.03 PlyA - 172191 172186    6                               1.05
 9.02 Term - 172420 172256  165  1  0   72   44   118 0.461   2.73
 9.01 Init - 177290 176838  453  2  0   43   61   161 0.179   4.81

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:100087680_100289983|GENSCAN_predicted_peptide_1|77_aa
XLRSGTLYAVTETAVPMKIRAHGGHANASLSVFSLLALPSAFLCLKIDTTDKLVEPFLKT
SMATFKGKQSKERKKKI

>gi568815594r:100087680_100289983|GENSCAN_predicted_CDS_1|234_bp
natctaagaagtgggaccttgtatgcagtcactgagacagctgttcccatgaaaatcagg
gctcatggaggacatgcaaatgcttctctgtcagtcttcagcctgcttgctctgccttct
gctttcctgtgccttaaaatagatacaacggataaactagtagaaccctttttaaaaaca
tcaatggccactttcaaaggaaaacaaagtaaggaaaggaaaaagaagatctga

>gi568815594r:100087680_100289983|GENSCAN_predicted_peptide_2|142_aa
MQYFCKIDDGAAAADDGNLQEKLIPIDIELGNRMSRADNPARTGEAADPGAIHLATQDGL
DFLTASRTRSKTAKADSAKPLNGKALKQQSFTSATSYWLKPVTKPVEIQKKRDRTHLLIE
KSCTCIKKGEDLTAIFEEYLPH

>gi568815594r:100087680_100289983|GENSCAN_predicted_CDS_2|429_bp
atgcagtacttttgtaaaattgatgatggtgctgctgctgctgatgatggtaacctgcaa
gagaagctaatccccattgacatagagctaggaaacagaatgtccagagcagacaatcca
gcaagaactggagaagctgcagacccaggtgctatccacctggccacccaggatggccta
gatttccttacggcatcgaggacgagatccaagacagcaaaagcagactctgccaagcct
cttaatggcaaggccctgaagcagcagagcttcacttctgccacctcctattggttaaag
cctgtcacaaagcctgtcgagattcagaaaaagagagatagaacccacctcctgatagaa
aaaagctgcacatgcataaagaaaggagaggatttgacagctatctttgaagagtatctg
ccccattaa

>gi568815594r:100087680_100289983|GENSCAN_predicted_peptide_3|107_aa
MVLEAEKAKIKGLASGESLLAALSHGRDAKRGTVHNSKDVETIQKPIKDRLDKENVAIYT
MEYYAAIKKDEFMPFAETWLKLEAIILSKLTQEQKTKHHMFSLISGS

>gi568815594r:100087680_100289983|GENSCAN_predicted_CDS_3|324_bp
atggttttggaggctgagaaggccaagatcaaggggctggcatctggtgagagccttctt
gctgcattatcccatggcagagatgcaaagagaggcactgttcacaatagcaaagacgtg
gaaacaatccaaaagcccatcaaggatagactggataaagaaaatgtggcaatatacacc
atggaatactatgcagccataaaaaaggatgagttcatgccctttgcggagacatggttg
aagctggaagccatcattctcagcaaactaacacaggaacagaaaaccaaacaccacatg
ttctcactcataagtgggagttga

>gi568815594r:100087680_100289983|GENSCAN_predicted_peptide_4|111_aa
MDKDFMTKTPKAMAIKAKIDKWDLIKLKIFCTAKDIIRVNRQPTELKKIFAIYPSDKGLI
SGIYKELKQIYKKKTKNPIKKWVKDMIRHFSKENIYAANKHTKKKLLITGH

>gi568815594r:100087680_100289983|GENSCAN_predicted_CDS_4|336_bp
atggacaaagacttcatgactaaaacaccaaaagcaatggcaataaaagccaaaattgac
aaatgggatctaattaaactaaagatcttctgcacagcaaaagatatcatcagagtgaac
aggcaacctacagaattgaagaaaatttttgcaatctatccatctgacaaagggctaata
tccggaatctacaaggaacttaaacaaatttacaagaaaaaaacaaagaaccccatcaaa
aagtgggtgaaggatatgatcagacacttttcaaaagaaaacatttatgcagccaacaaa
cataccaaaaaaaagctcctcatcactggtcattag

>gi568815594r:100087680_100289983|GENSCAN_predicted_peptide_5|251_aa
MDRIAAIKLEQMRCSLLWMSKEWFLEMESTRGEDAVNIAEMTTKDLEYSIKLFYGICGDI
NKCGVQLKELEKQEQTNSKASRRQEITKIRAELKEIGTQKTFQEINESRSWLFEKINKID
RLLARLIKKKREKNQIDTIKTDKGDITTDPTEIQTTIREYYKHLYANKLENLEEIDKFLD
TYTLPSLNQEEVEFPNTPITSSEIEAVINSLPTKKSPRPDGFRAKFYQRYKEELIPFPLK
IFQTTEKEGLL

>gi568815594r:100087680_100289983|GENSCAN_predicted_CDS_5|756_bp
atggaccgaattgctgcaataaaacttgaacagatgaggtgtagcctcttatggatgagc
aaagaatggtttcttgagatggaatctactcgtggtgaagatgctgtgaacattgctgaa
atgacaacaaaggatttagaatattccataaagcttttctatgggatctgtggtgatatt
aataaatgtggtgtccaattaaaagaactagagaagcaagagcaaacaaattcaaaagcc
agcagaagacaagaaataactaagataagagcagaactgaaggagatagggacacagaaa
acctttcaagaaattaatgaatccaggagctggctttttgaaaagattaacaaaatagat
agattgctagccagactaataaagaagaaaagagagaagaatcaaatagacacaataaaa
actgataaaggggatatcaccactgatcccacagaaatacaaactaccatcagagaatac
tataaacacctgtatgcaaataaactagaaaatctagaagaaattgataaattcctggac
acatacaccctcccaagtctaaaccaggaagaagtcgaattcccaaatacaccaataaca
agttctgaaattgaggcagtaattaacagcctaccaaccaaaaaaagcccacgaccagac
ggattcagagccaaattctaccagaggtacaaagaggagcttataccattccctctgaaa
atattccaaacaacagaaaaagagggactcctctaa

>gi568815594r:100087680_100289983|GENSCAN_predicted_peptide_6|480_aa
MLSGRCNRFKPSVQDDTAKPQDKEMHRSLKASRCREQPECESADARGGVALNNQVQALTS
RAPGIAVPVARDLPWKQQVSALPQAYPQLPVARLGLPGSVEVERGPDSGGEGRGAGRGGA
VQVGGPEQGGDWTYKVLAAPEAMLLRGAGAGWPGRGEQGAAGCWGLQVTESPGEGTPKKP
PACVYPAASAQAPANSWQGFVKLSCRGRFHPFGKGVPPLVRSRDAGHFRSLCTTRLLLQI
RLFSPHFFQRSGKAVAPREGNRAVDHGCNWQFEQQEPGQHFRIAGLWLSPREPAKWSVPL
DLLGGRAFDFLPYLYVGDFDYWDYVVPEPNLNEVIFEESTCQNLVKMLENCLSKSKQTKL
GCSKVLVPEKLTQRIAQDVLRLSSTEPCGLRGCVMHVNLEIENPFEGNIEEHFAVFYQQQ
HKDIEPTATVSENLLGSYHLIQSELAIADTVKSEGSTSSIRTDKFNVKGSESGVKELSRV

>gi568815594r:100087680_100289983|GENSCAN_predicted_CDS_6|1443_bp
atgctcagtggacgttgcaacagatttaagccaagtgttcaggatgacacagcaaagccc
caggacaaggaaatgcacagatcgcttaaagcttcccgctgccgggagcagcctgagtgt
gaaagcgcggacgctcggggaggggtcgcactgaacaatcaggttcaggctttgacgagt
cgtgcacccggaattgcggtcccagtggcccgagatctaccctggaagcaacaggtgtcc
gctctaccacaggcttatcctcaactccctgtggctaggctcgggctccctggaagtgta
gaggttgaaaggggaccagactctggaggggaggggcggggcgctggccggggaggggcg
gtgcaggtgggcgggcctgagcagggtggggactggacctataaagttctcgctgccccg
gaggctatgctactgcgaggagccggcgcagggtggcccgggaggggtgagcagggtgcc
gctggctgctggggtctgcaggtcaccgagtccccaggagaggggactcctaagaagcca
cctgcctgtgtttacccggcagcgagcgcgcaggcccccgcgaactcctggcagggcttt
gtcaaattgagttgcagaggccggttccacccctttggcaaaggagttcctccgctagtt
cgctcccgggacgccgggcattttaggagcctctgcacgactcgcctgcttttgcaaatc
cgtctcttctcgcctcattttttccagcgctcaggaaaggccgttgcgcctcgcgaagga
aacagagccgttgaccatggttgcaactggcagtttgagcagcaagaacccggccagcat
ttcagaattgctggactgtggctatcacccagagagcctgctaagtggtcggtgcctctg
gatctattgggtgggcgggctttcgacttcctcccctacctctatgtaggagattttgac
tactgggattatgttgttcctgaacccaacctcaacgaggtaatatttgaggaatcaact
tgccagaatttggttaaaatgctggagaactgtctgtccaaatcaaagcaaactaaactt
ggttgctcaaaggtccttgtccctgagaaactgacccagagaattgctcaagatgtcctg
cggctttcctcaacggagccctgcggcttgcgaggttgtgttatgcacgtgaacttggaa
attgaaaatccatttgaagggaatatagaagagcattttgcagtattctatcagcaacag
cataaagatattgagccaacggctaccgtgtcagagaatcttctgggtagctaccaccta
attcaaagtgaacttgctatcgcagacactgtgaagtctgaaggaagtaccagcagcatc
aggacagacaagtttaacgtgaagggaagtgaatctggtgtcaaagaactctcaagggtc
taa

>gi568815594r:100087680_100289983|GENSCAN_predicted_peptide_7|212_aa
MKPRTLAVSVTALKVVCLEFVPSDVRMSEFLPSGMKQQTFEVSVTALKVACLEFVPSDVR
MSEFLPSGMKPQTFEVSVTALKVACLVFVPSDVRICSEFLPSDSGGQLASPSGSRTRAAG
GAACQSRTVRPHSSALGWSIGLGAVEQGAALIGEARAAQEPMEGSVGQGEQKFKRSFGKR
SRSAPSNPTGHLSLTMEGIVEVKRNILRADNS

>gi568815594r:100087680_100289983|GENSCAN_predicted_CDS_7|639_bp
atgaagccgcggaccctcgcagtgagtgttacagctcttaaggtggtgtgtctggagttt
gttccttctgatgttcggatgtcggagtttcttccttctggaatgaagcagcagaccttc
gaagtgagtgttacagctcttaaggtggcgtgtctggagtttgttccttctgatgttcgg
atgtcggagtttcttccttctggaatgaagccgcagaccttcgaagtgagtgttacagct
cttaaggtggcgtgtctggtgtttgttccttctgatgttcggatatgttcggagtttctt
ccttctgattcaggaggccagctggcttcacccagtggatcccgaaccagggctgcaggt
ggagctgcctgccagtcccgcaccgtgcgcccacactcctcagcccttgggtggtcgata
ggactgggcgccgtggagcagggggcggcgctcatcggcgaggctcgggctgcacaggag
cccatggaggggagtgtagggcagggagagcagaagttcaaacgcagctttggaaaacgt
tctaggtcagctccatccaatccgacaggccaccttagtctgacaatggaaggtatagta
gaagttaagcgaaacattctcagggctgataacagttga

>gi568815594r:100087680_100289983|GENSCAN_predicted_peptide_8|178_aa
MPQLSLAPEADLGRADKVKQKSTLSRDSMADFYRPPDAAPPFCDLGITNDQHSSLVREHQ
PWGGYGQSTEDACWLTLMENRTYVEILGAGSPDNWQANMVFFFLSACENPIPFAGIYLHT
ALVGLSTGITSSVKPPLTLVQTTQEPEDCPTTATAIAHTTSAAQKPEDMPTHQTHFCH

>gi568815594r:100087680_100289983|GENSCAN_predicted_CDS_8|537_bp
atgccacagttgtcccttgcaccagaagcagatcttggaagagcagataaggttaaacag
aaatcaaccctttcaagagactccatggctgatttctaccgaccacctgatgctgcccct
cccttttgtgatttaggcataacaaatgaccagcattcctccctggtaagagagcaccaa
ccatggggtgggtatggccagtctacagaggatgcatgctggctgacacttatggaaaat
agaacctacgttgaaatattgggggcgggttcccctgataactggcaagccaacatggtt
ttctttttcctaagtgcatgtgagaacccaattccctttgctggcatctatctgcacaca
gctcttgtgggcctatcaactggcataaccagctcagtgaagccaccactcacactggtg
cagaccactcaggagccagaggattgtcccaccactgctactgccattgcccatactaca
tctgctgcccagaagcctgaggacatgcccacccatcaaacccacttctgccactga

>gi568815594r:100087680_100289983|GENSCAN_predicted_peptide_9|205_aa
MNVEVKILNKILANQIQQHIKKLIHHDPVSFIPGMQGWFNIHKSINEIHHIKRTNDKNHM
IISIETEKFFSKIQQPFMLKTLNKPGIDGTFLKIIRAIYDKPTPNIILNGQKLEGFPLKT
GTRQGGPLSPLLFNIVLEVLARAIRQEKEIKVLLAVFYKTQIKRWTKATELINDRVEMRI
RFSQMLKLKLFQLSSLQDAWHCKGA

>gi568815594r:100087680_100289983|GENSCAN_predicted_CDS_9|618_bp
atgaacgtcgaagtgaaaatcctcaataaaatactggcaaaccaaattcagcagcacatc
aaaaagcttatccaccacgatccagttagcttcatccctgggatgcaaggctggttcaac
atacacaaatcaataaatgaaatccatcacataaagagaaccaatgacaaaaaccacatg
attatctcaatagaaacagaaaagttcttcagtaaaattcaacagcccttcatgctaaaa
actctcaataaaccaggtattgatggaacatttctcaaaataataagagctatttatgac
aaacccacacccaatatcatactgaatgggcaaaaactggaaggattccctttgaaaacc
ggcacaagacaaggaggccctctctcaccactcctgttcaacatagtattggaagttctg
gccagggcaattaggcaagagaaagaaataaaggtgttactggctgtgttttataagact
cagattaagaggtggacaaaggccacagagctaataaatgacagagtggagatgcgaatt
cggttctctcagatgctaaagctcaagctctttcaactaagctcactacaagatgcctgg
cattgcaaaggtgcctga