GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:15:41

Sequence gi568815596r:231825428_232026249 : 200822 bp : 44.97% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  25991  25998    8  1  2   70  105    11 0.512   0.72
 1.02 Term +  29463  29577  115  0  1  127   42    48 0.491   2.14
 1.03 PlyA +  31820  31825    6                               1.05

 2.04 PlyA -  32272  32267    6                               1.05
 2.03 Term -  52675  52506  170  2  2   58   48   174 0.551   8.44
 2.02 Intr -  60940  60822  119  0  2   92   19   101 0.122   3.71
 2.01 Init -  75213  75104  110  0  2   77   99    45 0.063   4.33
 2.00 Prom -  78317  78278   40                              -6.26

 3.03 PlyA -  78327  78322    6                               1.05
 3.02 Term - 100288  99998  291  1  0  126   39   442 0.173  38.44
 3.01 Init - 100822 100733   90  1  0   99   98   228 0.985  23.39
 3.00 Prom - 101001 100962   40                              -5.36

 4.05 PlyA - 103563 103558    6                               1.05
 4.04 Term - 106771 106568  204  1  0   32   37   151 0.063   1.77
 4.03 Intr - 109571 109528   44  0  2   99   94    53 0.241   4.96
 4.02 Intr - 116591 116462  130  2  1   55   66    83 0.321   3.07
 4.01 Init - 163356 163249  108  0  0   62  103    80 0.904   7.12
 4.00 Prom - 172426 172387   40                              -4.46

 5.00 Prom + 177257 177296   40                              -2.76
 5.01 Init + 188810 188816    7  1  1   66  110     5 0.933   1.32
 5.02 Term + 190087 190277  191  2  2   89   42   169 0.867  10.01
 5.03 PlyA + 192597 192602    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  57010  56956   55  1  1   86   75    18 0.837   1.76
S.002 Intr - 100288 100003  286  1  1  126   19   469 0.806  40.71


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:231825428_232026249|GENSCAN_predicted_peptide_1|40_aa
MIWSDEIGDASAQKGSAGRRNPGRSRNQSLSQQEVWELQM

>gi568815596r:231825428_232026249|GENSCAN_predicted_CDS_1|123_bp
atgatctggagtgatgaaataggagatgcatctgcacagaaaggctcggctggccgcaga
aacccaggcaggtccagaaaccagtccttgagccagcaggaggtttgggagctgcagatg
tga

>gi568815596r:231825428_232026249|GENSCAN_predicted_peptide_2|132_aa
MGVDGRREVRALAGCSLSQQGHWGQLLCGAFARPRPRQLDVNKHGDPGSNMLKIAEPQDG
RILGLRISAECQPAGHTEENALEKAFAFTLVQSEKALSTSEWKTPTFRGLEQVSAGILRT
GFVPVSGQLPKH

>gi568815596r:231825428_232026249|GENSCAN_predicted_CDS_2|399_bp
atgggcgtggacggcagaagggaagtccgtgctctcgccggctgctccttgagccagcag
ggccactggggccagcttctgtgcggtgcattcgcacgaccacgccccagacagcttgat
gtgaacaagcatggtgaccctggaagcaacatgctgaagatagcagagccacaagatggc
aggatcctgggtctaagaatcagtgctgagtgccagccagctggccacacagaagaaaat
gctctagagaaagcttttgccttcacgctggtacagagtgagaaagcactgtcaacatct
gagtggaaaaccccaacattccgcggcctcgagcaggtctctgctggaatcctgaggaca
ggctttgttcctgtgtctggccagctgcccaaacactga

>gi568815596r:231825428_232026249|GENSCAN_predicted_peptide_3|126_aa
MHLSQLLACALLLTLLSLRPSEAKPGAPPKVPRTPPAEELAEPQAAGGGQKKGDKAPGGG
GANLKGDRSRLLRDLRVDTKSRAAWARLLQEHPNARKYKGANKKGLSKGCFGLKLDRIGS
MSGLGC

>gi568815596r:231825428_232026249|GENSCAN_predicted_CDS_3|381_bp
atgcatctctcccagctgctggcctgcgccctgctgctcacgctgctctccctccggccc
tccgaagccaagcccggggcgccgccgaaggtcccgcgaaccccgccggcagaggagctg
gccgagccgcaggctgcgggcggcggtcagaagaagggcgacaaggctcccgggggcggg
ggcgccaatctcaagggcgaccggtcgcgactgctccgggacctgcgcgtggacaccaag
tcgcgggcagcgtgggctcgccttctgcaagagcaccccaacgcgcgcaaatacaaagga
gccaacaagaagggcttgtccaagggctgcttcggcctcaagctggaccgaatcggctcc
atgagcggcctgggatgttag

>gi568815596r:231825428_232026249|GENSCAN_predicted_peptide_4|161_aa
MALVLGKYCYNNAYYSQDCGCKHLEVTTNRLSALSTSRCWSNHSEISPGASETVPTALVL
LTAASATTPETSPSLGGPLVPESAATLKPEAISQGWCNGIGAVQVTYPGTGCKGARESKH
MMIRLLQWAVMPGSSNHGWTRAHVTWTLASTPYHLCGHRHP

>gi568815596r:231825428_232026249|GENSCAN_predicted_CDS_4|486_bp
atggccttagtcttgggaaagtattgctacaacaatgcctactactctcaggactgcggc
tgcaaacatctggaagttactaccaacagactttcagccctaagcacgagccgctgctgg
tccaaccacagtgaaatctccccgggagcctcagaaacagtccctacggctctggtgctg
ctcactgctgcctctgctaccaccccggagaccagcccctccctcggtggtcccttagtc
ccagaatctgcagcaaccctgaaaccagaggccatctcccagggctggtgcaacggaatt
ggggcagtccaggtcacatacccaggcacaggttgcaagggtgcccgagaaagcaagcac
atgatgattcgacttctccagtgggctgtgatgccgggcagcagcaaccatggatggaca
cgtgctcacgtcacatggacactcgcctctactccttaccacctctgtggacatcgacat
ccttaa

>gi568815596r:231825428_232026249|GENSCAN_predicted_peptide_5|65_aa
MAGVSAVAGPHDIGASPGDKKSKNRSTRGKKKSIFETYMSKEDVSEGLKRGTLIQVLKIY
WKAIL

>gi568815596r:231825428_232026249|GENSCAN_predicted_CDS_5|198_bp
atggcaggtgtgtctgctgtggctggtccacatgacattggtgcttcgccaggtgacaaa
aagtcaaagaacaggtccacacgagggaagaaaaagagcatatttgaaacttacatgtcc
aaggaggatgtttcagaaggcttgaagagaggaacactcatccaggtgcttaaaatctac
tggaaggctattctctga