Result of FASTA (omim) for pF1KB8811
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8811, 362 aa
  1>>>pF1KB8811 362 - 362 aa - 362 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4200+/-0.000417; mu= 15.9294+/- 0.026
 mean_var=158.0921+/-43.365, 0's: 0 Z-trim(111.6): 552  B-trim: 0 in 0/53
 Lambda= 0.102004
 statistics sampled from 19520 (20259) to 19520 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.605), E-opt: 0.2 (0.238), width:  16
 Scan time:  6.940

The best scores are:                                      opt bits E(85289)
NP_005273 (OMIM: 600551) G-protein coupled recepto ( 362) 2479 377.7 2.3e-104
XP_016882097 (OMIM: 600551) PREDICTED: G-protein c ( 362) 2479 377.7 2.3e-104
XP_016882096 (OMIM: 600551) PREDICTED: G-protein c ( 362) 2479 377.7 2.3e-104
NP_003476 (OMIM: 601404) ovarian cancer G-protein  ( 365) 1112 176.5 8.3e-44
NP_001171147 (OMIM: 601404) ovarian cancer G-prote ( 365) 1112 176.5 8.3e-44
XP_005268167 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_011535499 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_011535498 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_006720325 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_011535501 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_005268168 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_005268169 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
XP_011535500 (OMIM: 601404) PREDICTED: ovarian can ( 375) 1112 176.5 8.4e-44
NP_003599 (OMIM: 604620) psychosine receptor [Homo ( 337)  798 130.3 6.4e-30
NP_001265624 (OMIM: 606167) probable G-protein cou ( 371)  667 111.0 4.3e-24
NP_001265623 (OMIM: 606167) probable G-protein cou ( 380)  667 111.1 4.4e-24
NP_037477 (OMIM: 606167) probable G-protein couple ( 380)  667 111.1 4.4e-24
XP_016860005 (OMIM: 610376) PREDICTED: atypical ch ( 362)  540 92.3 1.8e-18
NP_064707 (OMIM: 610376) atypical chemokine recept ( 362)  540 92.3 1.8e-18
XP_005246154 (OMIM: 610376) PREDICTED: atypical ch ( 362)  540 92.3 1.8e-18
XP_005246155 (OMIM: 610376) PREDICTED: atypical ch ( 362)  540 92.3 1.8e-18
NP_001158194 (OMIM: 173393) platelet-activating fa ( 342)  529 90.7 5.3e-18
NP_001158195 (OMIM: 173393) platelet-activating fa ( 342)  529 90.7 5.3e-18
NP_001158193 (OMIM: 173393) platelet-activating fa ( 342)  529 90.7 5.3e-18
NP_000943 (OMIM: 173393) platelet-activating facto ( 342)  529 90.7 5.3e-18
NP_001155969 (OMIM: 278150,609239) lysophosphatidi ( 344)  525 90.1 8.1e-18
NP_001155970 (OMIM: 278150,609239) lysophosphatidi ( 344)  525 90.1 8.1e-18
NP_005758 (OMIM: 278150,609239) lysophosphatidic a ( 344)  525 90.1 8.1e-18
NP_001264929 (OMIM: 300086) lysophosphatidic acid  ( 370)  517 89.0 1.9e-17
NP_005287 (OMIM: 300086) lysophosphatidic acid rec ( 370)  517 89.0 1.9e-17
XP_005262183 (OMIM: 300086) PREDICTED: lysophospha ( 370)  517 89.0 1.9e-17
XP_016884926 (OMIM: 300086) PREDICTED: lysophospha ( 370)  517 89.0 1.9e-17
XP_016884927 (OMIM: 300086) PREDICTED: lysophospha ( 370)  517 89.0 1.9e-17
XP_006724702 (OMIM: 300086) PREDICTED: lysophospha ( 370)  517 89.0 1.9e-17
NP_001154888 (OMIM: 603071) uracil nucleotide/cyst ( 339)  507 87.4   5e-17
NP_001154889 (OMIM: 603071) uracil nucleotide/cyst ( 339)  507 87.4   5e-17
XP_016859322 (OMIM: 603071) PREDICTED: uracil nucl ( 367)  507 87.5 5.2e-17
NP_001154887 (OMIM: 603071) uracil nucleotide/cyst ( 367)  507 87.5 5.2e-17
NP_005282 (OMIM: 603071) uracil nucleotide/cystein ( 367)  507 87.5 5.2e-17
XP_016864712 (OMIM: 600933) PREDICTED: proteinase- ( 383)  506 87.4 5.9e-17
NP_005233 (OMIM: 600933) proteinase-activated rece ( 397)  506 87.4 6.1e-17
NP_002554 (OMIM: 601167) P2Y purinoceptor 1 [Homo  ( 373)  500 86.5 1.1e-16
XP_016875894 (OMIM: 605741) PREDICTED: G-protein c ( 361)  484 84.1 5.4e-16
NP_004942 (OMIM: 605741) G-protein coupled recepto ( 361)  484 84.1 5.4e-16
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355)  475 82.8 1.3e-15
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360)  471 82.2   2e-15
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360)  471 82.2   2e-15
NP_002555 (OMIM: 600041) P2Y purinoceptor 2 [Homo  ( 377)  464 81.2 4.3e-15
NP_788085 (OMIM: 600041) P2Y purinoceptor 2 [Homo  ( 377)  464 81.2 4.3e-15
NP_788086 (OMIM: 600041) P2Y purinoceptor 2 [Homo  ( 377)  464 81.2 4.3e-15


>>NP_005273 (OMIM: 600551) G-protein coupled receptor 4   (362 aa)
 initn: 2479 init1: 2479 opt: 2479  Z-score: 1994.8  bits: 377.7 E(85289): 2.3e-104
Smith-Waterman score: 2479; 100.0% identity (100.0% similar) in 362 aa overlap (1-362:1-362)

               10        20        30        40        50        60
pF1KB8 MGNHTWEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MGNHTWEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 IADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRYLAVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 IADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRYLAVA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 HPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEGWVAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEGWVAW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 MNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVCFAPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVCFAPY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 HVLLLSRSAIYLGRPWDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVAKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HVLLLSRSAIYLGRPWDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVAKA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 LHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQLKMLPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQLKMLPP
              310       320       330       340       350       360

         
pF1KB8 AQ
       ::
NP_005 AQ
         

>>XP_016882097 (OMIM: 600551) PREDICTED: G-protein coupl  (362 aa)
 initn: 2479 init1: 2479 opt: 2479  Z-score: 1994.8  bits: 377.7 E(85289): 2.3e-104
Smith-Waterman score: 2479; 100.0% identity (100.0% similar) in 362 aa overlap (1-362:1-362)

               10        20        30        40        50        60
pF1KB8 MGNHTWEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGNHTWEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 IADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRYLAVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRYLAVA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 HPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEGWVAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEGWVAW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 MNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVCFAPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVCFAPY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 HVLLLSRSAIYLGRPWDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVAKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HVLLLSRSAIYLGRPWDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVAKA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 LHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQLKMLPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQLKMLPP
              310       320       330       340       350       360

         
pF1KB8 AQ
       ::
XP_016 AQ
         

>>XP_016882096 (OMIM: 600551) PREDICTED: G-protein coupl  (362 aa)
 initn: 2479 init1: 2479 opt: 2479  Z-score: 1994.8  bits: 377.7 E(85289): 2.3e-104
Smith-Waterman score: 2479; 100.0% identity (100.0% similar) in 362 aa overlap (1-362:1-362)

               10        20        30        40        50        60
pF1KB8 MGNHTWEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGNHTWEGCHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYLMNLS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 IADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRYLAVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRYLAVA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 HPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEGWVAW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEGWVAW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 MNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVCFAPY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVCFAPY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 HVLLLSRSAIYLGRPWDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVAKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HVLLLSRSAIYLGRPWDCGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGARSDVAKA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 LHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQLKMLPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQLKMLPP
              310       320       330       340       350       360

         
pF1KB8 AQ
       ::
XP_016 AQ
         

>>NP_003476 (OMIM: 601404) ovarian cancer G-protein coup  (365 aa)
 initn: 1093 init1: 940 opt: 1112  Z-score: 907.5  bits: 176.5 E(85289): 8.3e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:1-331)

                   10        20        30        40        50      
pF1KB8 MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYL
       ::: : ..    : .:  . . . : .:. :. ::.:.:::.:. .: :.. ::::::::
NP_003 MGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQIKARNELGVYL
               10        20        30        40        50        60

         60        70        80        90       100       110      
pF1KB8 MNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRY
        ::..:::.:::.::.:..: :.:::: ::  ::.. :...: :::::..::::::::::
NP_003 CNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVGFLCCISVDRY
               70        80        90       100       110       120

        120       130       140       150       160       170      
pF1KB8 LAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEG
       ::::::.:: ..: .:.::.:: :.:: :: ..   :.:.:...:. .:  :::..:...
NP_003 LAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHRVCFEHYPIQA
              130       140       150       160       170       180

        180       190       200       210       220       230      
pF1KB8 WVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVC
       :   .: :: .::::::  :.: ::.::::::: : .:....: .:.::.:: ..: :.:
NP_003 WQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLVLSTVVIFLAC
              190       200       210       220       230       240

        240       250         260       270       280       290    
pF1KB8 FAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGAR
       : ::::::: ::.      :.  : : . ::.::: :: .::.::::::.:::.:.: ..
NP_003 FLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPVLYCFVSETTH
              250             260       270       280       290    

          300       310       320       330       340       350    
pF1KB8 SDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQ
        :.:.     : ::. ..  . :  .  : .: .: ..                      
NP_003 RDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTKLHPAFQTPNS
          300       310        320       330       340       350   

          360      
pF1KB8 LKMLPPAQ    
                   
NP_003 PGSGGFPTGRLA
           360     

>>NP_001171147 (OMIM: 601404) ovarian cancer G-protein c  (365 aa)
 initn: 1093 init1: 940 opt: 1112  Z-score: 907.5  bits: 176.5 E(85289): 8.3e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:1-331)

                   10        20        30        40        50      
pF1KB8 MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQVQQRNELGVYL
       ::: : ..    : .:  . . . : .:. :. ::.:.:::.:. .: :.. ::::::::
NP_001 MGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQIKARNELGVYL
               10        20        30        40        50        60

         60        70        80        90       100       110      
pF1KB8 MNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIAFLCCISVDRY
        ::..:::.:::.::.:..: :.:::: ::  ::.. :...: :::::..::::::::::
NP_001 CNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVGFLCCISVDRY
               70        80        90       100       110       120

        120       130       140       150       160       170      
pF1KB8 LAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHTFCFEKFPMEG
       ::::::.:: ..: .:.::.:: :.:: :: ..   :.:.:...:. .:  :::..:...
NP_001 LAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHRVCFEHYPIQA
              130       140       150       160       170       180

        180       190       200       210       220       230      
pF1KB8 WVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLALSLIAIVLVC
       :   .: :: .::::::  :.: ::.::::::: : .:....: .:.::.:: ..: :.:
NP_001 WQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLVLSTVVIFLAC
              190       200       210       220       230       240

        240       250         260       270       280       290    
pF1KB8 FAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPILYCLVNEGAR
       : ::::::: ::.      :.  : : . ::.::: :: .::.::::::.:::.:.: ..
NP_001 FLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPVLYCFVSETTH
              250             260       270       280       290    

          300       310       320       330       340       350    
pF1KB8 SDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAATPPSQGDQVQ
        :.:.     : ::. ..  . :  .  : .: .: ..                      
NP_001 RDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTKLHPAFQTPNS
          300       310        320       330       340       350   

          360      
pF1KB8 LKMLPPAQ    
                   
NP_001 PGSGGFPTGRLA
           360     

>>XP_005268167 (OMIM: 601404) PREDICTED: ovarian cancer   (375 aa)
 initn: 1093 init1: 940 opt: 1112  Z-score: 907.4  bits: 176.5 E(85289): 8.4e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:11-341)

                             10        20        30        40      
pF1KB8           MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQV
                 ::: : ..    : .:  . . . : .:. :. ::.:.:::.:. .: :.
XP_005 MRSVAPSGPKMGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQI
               10        20        30        40        50        60

         50        60        70        80        90       100      
pF1KB8 QQRNELGVYLMNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIA
       . :::::::: ::..:::.:::.::.:..: :.:::: ::  ::.. :...: :::::..
XP_005 KARNELGVYLCNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVG
               70        80        90       100       110       120

        110       120       130       140       150       160      
pF1KB8 FLCCISVDRYLAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHT
       ::::::::::::::::.:: ..: .:.::.:: :.:: :: ..   :.:.:...:. .: 
XP_005 FLCCISVDRYLAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHR
              130       140       150       160       170       180

        170       180       190       200       210       220      
pF1KB8 FCFEKFPMEGWVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLA
        :::..:...:   .: :: .::::::  :.: ::.::::::: : .:....: .:.::.
XP_005 VCFEHYPIQAWQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLV
              190       200       210       220       230       240

        230       240       250         260       270       280    
pF1KB8 LSLIAIVLVCFAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPI
       :: ..: :.:: ::::::: ::.      :.  : : . ::.::: :: .::.::::::.
XP_005 LSTVVIFLACFLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPV
              250       260             270       280       290    

          290       300       310       320       330       340    
pF1KB8 LYCLVNEGARSDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAA
       :::.:.: .. :.:.     : ::. ..  . :  .  : .: .: ..            
XP_005 LYCFVSETTHRDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTK
          300       310       320        330       340       350   

          350       360      
pF1KB8 TPPSQGDQVQLKMLPPAQ    
                             
XP_005 LHPAFQTPNSPGSGGFPTGRLA
           360       370     

>>XP_011535499 (OMIM: 601404) PREDICTED: ovarian cancer   (375 aa)
 initn: 1093 init1: 940 opt: 1112  Z-score: 907.4  bits: 176.5 E(85289): 8.4e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:11-341)

                             10        20        30        40      
pF1KB8           MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQV
                 ::: : ..    : .:  . . . : .:. :. ::.:.:::.:. .: :.
XP_011 MRSVAPSGPKMGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQI
               10        20        30        40        50        60

         50        60        70        80        90       100      
pF1KB8 QQRNELGVYLMNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIA
       . :::::::: ::..:::.:::.::.:..: :.:::: ::  ::.. :...: :::::..
XP_011 KARNELGVYLCNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVG
               70        80        90       100       110       120

        110       120       130       140       150       160      
pF1KB8 FLCCISVDRYLAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHT
       ::::::::::::::::.:: ..: .:.::.:: :.:: :: ..   :.:.:...:. .: 
XP_011 FLCCISVDRYLAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHR
              130       140       150       160       170       180

        170       180       190       200       210       220      
pF1KB8 FCFEKFPMEGWVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLA
        :::..:...:   .: :: .::::::  :.: ::.::::::: : .:....: .:.::.
XP_011 VCFEHYPIQAWQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLV
              190       200       210       220       230       240

        230       240       250         260       270       280    
pF1KB8 LSLIAIVLVCFAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPI
       :: ..: :.:: ::::::: ::.      :.  : : . ::.::: :: .::.::::::.
XP_011 LSTVVIFLACFLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPV
              250       260             270       280       290    

          290       300       310       320       330       340    
pF1KB8 LYCLVNEGARSDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAA
       :::.:.: .. :.:.     : ::. ..  . :  .  : .: .: ..            
XP_011 LYCFVSETTHRDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTK
          300       310       320        330       340       350   

          350       360      
pF1KB8 TPPSQGDQVQLKMLPPAQ    
                             
XP_011 LHPAFQTPNSPGSGGFPTGRLA
           360       370     

>>XP_011535498 (OMIM: 601404) PREDICTED: ovarian cancer   (375 aa)
 initn: 1093 init1: 940 opt: 1112  Z-score: 907.4  bits: 176.5 E(85289): 8.4e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:11-341)

                             10        20        30        40      
pF1KB8           MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQV
                 ::: : ..    : .:  . . . : .:. :. ::.:.:::.:. .: :.
XP_011 MRSVAPSGPKMGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQI
               10        20        30        40        50        60

         50        60        70        80        90       100      
pF1KB8 QQRNELGVYLMNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIA
       . :::::::: ::..:::.:::.::.:..: :.:::: ::  ::.. :...: :::::..
XP_011 KARNELGVYLCNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVG
               70        80        90       100       110       120

        110       120       130       140       150       160      
pF1KB8 FLCCISVDRYLAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHT
       ::::::::::::::::.:: ..: .:.::.:: :.:: :: ..   :.:.:...:. .: 
XP_011 FLCCISVDRYLAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHR
              130       140       150       160       170       180

        170       180       190       200       210       220      
pF1KB8 FCFEKFPMEGWVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLA
        :::..:...:   .: :: .::::::  :.: ::.::::::: : .:....: .:.::.
XP_011 VCFEHYPIQAWQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLV
              190       200       210       220       230       240

        230       240       250         260       270       280    
pF1KB8 LSLIAIVLVCFAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPI
       :: ..: :.:: ::::::: ::.      :.  : : . ::.::: :: .::.::::::.
XP_011 LSTVVIFLACFLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPV
              250       260             270       280       290    

          290       300       310       320       330       340    
pF1KB8 LYCLVNEGARSDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAA
       :::.:.: .. :.:.     : ::. ..  . :  .  : .: .: ..            
XP_011 LYCFVSETTHRDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTK
          300       310       320        330       340       350   

          350       360      
pF1KB8 TPPSQGDQVQLKMLPPAQ    
                             
XP_011 LHPAFQTPNSPGSGGFPTGRLA
           360       370     

>>XP_006720325 (OMIM: 601404) PREDICTED: ovarian cancer   (375 aa)
 initn: 1093 init1: 940 opt: 1112  Z-score: 907.4  bits: 176.5 E(85289): 8.4e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:11-341)

                             10        20        30        40      
pF1KB8           MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQV
                 ::: : ..    : .:  . . . : .:. :. ::.:.:::.:. .: :.
XP_006 MRSVAPSGPKMGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQI
               10        20        30        40        50        60

         50        60        70        80        90       100      
pF1KB8 QQRNELGVYLMNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIA
       . :::::::: ::..:::.:::.::.:..: :.:::: ::  ::.. :...: :::::..
XP_006 KARNELGVYLCNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVG
               70        80        90       100       110       120

        110       120       130       140       150       160      
pF1KB8 FLCCISVDRYLAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHT
       ::::::::::::::::.:: ..: .:.::.:: :.:: :: ..   :.:.:...:. .: 
XP_006 FLCCISVDRYLAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHR
              130       140       150       160       170       180

        170       180       190       200       210       220      
pF1KB8 FCFEKFPMEGWVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLA
        :::..:...:   .: :: .::::::  :.: ::.::::::: : .:....: .:.::.
XP_006 VCFEHYPIQAWQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLV
              190       200       210       220       230       240

        230       240       250         260       270       280    
pF1KB8 LSLIAIVLVCFAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPI
       :: ..: :.:: ::::::: ::.      :.  : : . ::.::: :: .::.::::::.
XP_006 LSTVVIFLACFLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPV
              250       260             270       280       290    

          290       300       310       320       330       340    
pF1KB8 LYCLVNEGARSDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAA
       :::.:.: .. :.:.     : ::. ..  . :  .  : .: .: ..            
XP_006 LYCFVSETTHRDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTK
          300       310       320        330       340       350   

          350       360      
pF1KB8 TPPSQGDQVQLKMLPPAQ    
                             
XP_006 LHPAFQTPNSPGSGGFPTGRLA
           360       370     

>>XP_011535501 (OMIM: 601404) PREDICTED: ovarian cancer   (375 aa)
 initn: 1093 init1: 940 opt: 1112  Z-score: 907.4  bits: 176.5 E(85289): 8.4e-44
Smith-Waterman score: 1112; 49.1% identity (75.4% similar) in 338 aa overlap (1-332:11-341)

                             10        20        30        40      
pF1KB8           MGNHTWEG----CHVDSRVDHLFPPSLYIFVIGVGLPTNCLALWAAYRQV
                 ::: : ..    : .:  . . . : .:. :. ::.:.:::.:. .: :.
XP_011 MRSVAPSGPKMGNITADNSSMSCTIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQI
               10        20        30        40        50        60

         50        60        70        80        90       100      
pF1KB8 QQRNELGVYLMNLSIADLLYICTLPLWVDYFLHHDNWIHGPGSCKLFGFIFYTNIYISIA
       . :::::::: ::..:::.:::.::.:..: :.:::: ::  ::.. :...: :::::..
XP_011 KARNELGVYLCNLTVADLFYICSLPFWLQYVLQHDNWSHGDLSCQVCGILLYENIYISVG
               70        80        90       100       110       120

        110       120       130       140       150       160      
pF1KB8 FLCCISVDRYLAVAHPLRFARLRRVKTAVAVSSVVWATELGANSAPLFHDELFRDRYNHT
       ::::::::::::::::.:: ..: .:.::.:: :.:: :: ..   :.:.:...:. .: 
XP_011 FLCCISVDRYLAVAHPFRFHQFRTLKAAVGVSVVIWAKELLTSIYFLMHEEVIEDENQHR
              130       140       150       160       170       180

        170       180       190       200       210       220      
pF1KB8 FCFEKFPMEGWVAWMNLYRVFVGFLFPWALMLLSYRGILRAVRGSVSTERQEKAKIKRLA
        :::..:...:   .: :: .::::::  :.: ::.::::::: : .:....: .:.::.
XP_011 VCFEHYPIQAWQRAINYYRFLVGFLFPICLLLASYQGILRAVRRSHGTQKSRKDQIQRLV
              190       200       210       220       230       240

        230       240       250         260       270       280    
pF1KB8 LSLIAIVLVCFAPYHVLLLSRSAIYLGRPWD--CGFEERVFSAYHSSLAFTSLNCVADPI
       :: ..: :.:: ::::::: ::.      :.  : : . ::.::: :: .::.::::::.
XP_011 LSTVVIFLACFLPYHVLLLVRSV------WEASCDFAKGVFNAYHFSLLLTSFNCVADPV
              250       260             270       280       290    

          290       300       310       320       330       340    
pF1KB8 LYCLVNEGARSDVAKALHNLLRFLASDKPQEMANASLTLETPLTSKRNSTAKAMTGSWAA
       :::.:.: .. :.:.     : ::. ..  . :  .  : .: .: ..            
XP_011 LYCFVSETTHRDLARLRGACLAFLTCSRTGR-AREAYPLGAPEASGKSGAQGEEPELLTK
          300       310       320        330       340       350   

          350       360      
pF1KB8 TPPSQGDQVQLKMLPPAQ    
                             
XP_011 LHPAFQTPNSPGSGGFPTGRLA
           360       370     




362 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 15:48:35 2016 done: Fri Nov  4 15:48:36 2016
 Total Scan time:  6.940 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com