GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:44:46

Sequence gi568815584r:61180095_61381147 : 201053 bp : 42.27% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5595   5805  211  2  1   45   30   276 0.188  14.53
 1.02 Intr +   6585   6763  179  1  2   47   20   124 0.088   0.22
 1.03 Intr +   7467   7574  108  2  0   36   94    64 0.033   1.36
 1.04 Intr +  25538  25627   90  1  0  125   98    47 0.624   8.67
 1.05 Intr +  29258  29324   67  1  1    8  107    84 0.348  -0.14
 1.06 Intr +  31021  31157  137  2  2   61   99   114 0.647   9.17
 1.07 Term +  35624  35692   69  1  0   99   42    24 0.099  -4.14
 1.08 PlyA +  35955  35960    6                               1.05

 2.07 PlyA -  36013  36008    6                               1.05
 2.06 Term -  37575  37368  208  2  1   60   44   150 0.757   3.63
 2.05 Intr -  40230  40080  151  1  1   88   54    94 0.464   4.30
 2.04 Intr -  64615  64540   76  1  1   77   66    94 0.469   4.27
 2.03 Intr -  67966  67769  198  1  0   74   93    89 0.564   6.63
 2.02 Intr -  76419  76270  150  0  0   39   71   125 0.466   5.34
 2.01 Init -  87325  87173  153  1  0   71   73    75 0.174   4.33
 2.00 Prom -  95147  95108   40                              -3.35

 3.02 PlyA -  95680  95675    6                               1.05
 3.01 Sngl - 101053  99998 1056  1  0  113   37  1511 0.999 145.39
 3.00 Prom - 106069 106030   40                              -6.15

 4.10 PlyA - 106120 106115    6                               1.05
 4.09 Term - 109009 108841  169  0  1  -36   48   150 0.240  -5.03
 4.08 Intr - 109846 109753   94  2  1  104   49   100 0.730   5.80
 4.07 Intr - 116503 116302  202  1  1   99   37   116 0.779   5.54
 4.06 Intr - 118422 118357   66  0  0   67  106    57 0.904   3.58
 4.05 Intr - 120841 120696  146  2  2   12   68    79 0.361  -2.62
 4.04 Intr - 121072 120862  211  1  1   48   64   123 0.483   3.46
 4.03 Intr - 122275 122139  137  2  2   37  115    23 0.558  -0.73
 4.02 Intr - 129260 129203   58  2  1   98   76    62 0.149   3.54
 4.01 Init - 131364 130792  573  0  0   86   55   210 0.113  12.67
 4.00 Prom - 131836 131797   40                              -7.15

 5.00 Prom + 132597 132636   40                              -6.25
 5.01 Init + 133589 133638   50  1  2   86   72    44 0.649   3.07
 5.02 Intr + 141417 141576  160  0  1   54   49   155 0.856   7.27
 5.03 Intr + 141900 142539  640  2  1   53   57   767 0.409  60.80
 5.04 Intr + 142598 142667   70  0  1   73   82    86 0.462   3.82
 5.05 Intr + 160009 160122  114  1  0   78   82    78 0.001   4.84
 5.06 Intr + 164408 164535  128  2  2   34  101   129 0.028   8.20
 5.07 Intr + 187295 187348   54  0  0   39   68    93 0.511   0.43
 5.08 Term + 188294 188520  227  0  2   89   48   164 0.937   8.46
 5.09 PlyA + 189707 189712    6                              -0.45

 6.04 PlyA - 189760 189755    6                               1.05
 6.03 Term - 191453 191297  157  1  1   47   42   103 0.317  -1.98
 6.02 Intr - 194313 194107  207  2  0  -11   62   161 0.181   0.87
 6.01 Init - 197093 196984  110  2  2   78   74   140 0.967  11.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +   6585   6796  212  1  2   47   50   147 0.820   3.27
S.002 Init - 170138 170089   50  2  2   53  100    97 0.934   7.87
S.003 Sngl + 178604 178852  249  1  0   47   46   212 0.888   5.83


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:61180095_61381147|GENSCAN_predicted_peptide_1|286_aa
MVVMLLVLVAVVFLLVVLVVVVMLLVVVGVGGGSGEGSDDSGGSGGGGGGSGDSGSSGGG
GGGDIEHTVEDWCFPRTELPKTGRVCFHMEGHIYASEAIYLFLAIHLEQPQFSEEATCTT
LQQQRMIRFRNSACLSGCNACLLLLLQAPPGEGRCFCLVQDRIRVWVSLLSASLPEGFPQ
FKETGSALAQDRAKIQEEGPHQQLNYTGTKILDSSFQNGLILNCPAEEAGALCQGVAMIH
GPGLGEAEGRARGTVGCSDMPLCEGLPCFDRRVRPCYSYVPLSMLQ

>gi568815584r:61180095_61381147|GENSCAN_predicted_CDS_1|861_bp
atggtagtgatgttgctggtgttggtggcagtggtgtttttgttggtagtgctggttgtg
gtggtgatgttattggtagtggttggtgttggtggtggtagtggtgaaggtagtgatgat
agtggtggtagtggtggtggtggtggaggtagtggtgatagtggcagtagtggtggtggt
ggtggtggtgacattgagcatacagtagaggattggtgctttccacggactgagttgccg
aagaccgggagagtgtgttttcatatggaaggtcacatctatgcatcagaggctatttat
ctttttctggccattcatttagagcagccgcagttttctgaagaagccacatgcaccaca
ctccaacagcagagaatgattcggttcagaaactctgcatgcttatcggggtgtaatgcc
tgcctcctgctgctgctccaagctcctccaggagaaggacgctgcttctgcctggtccag
gatcgtatcagggtctgggtgtctctcctctctgcttccctacctgagggctttccccag
ttcaaggaaactggttcggcccttgcacaggacagagctaaaatacaggaagaaggccct
catcagcaactcaactatactggcaccaagatcttggattccagcttccagaacggcttg
atactgaattgccctgcagaagaagctggtgccctttgccagggagtggccatgatacat
ggcccaggacttggagaagctgaaggaagagctcgaggaactgtgggttgcagtgatatg
cccctgtgtgagggcttgccatgtttcgatagaagagtacgaccctgctatagctatgtt
ccactttctatgttgcaataa

>gi568815584r:61180095_61381147|GENSCAN_predicted_peptide_2|311_aa
MHLGLECQKSENIKESFSVPEVSLNREALLDRHTSRLRALHLAVLSQSELYDQKASTISH
RRALSSGKISTDGTKAMTEHTPQAVGFTDGSMLRNQLRGIQKHTPRPYKEVLQLHHCEMT
LDDYISKLMEYPVFESHFRIIENKAHGDMEVSLPMPVFPDDLYCCLQEKVDYQMPVTVAP
ESTKPLSYSRTSAIALAEVIKKVPLLGVHLLGRLCSLTEEMSLDEGDQEPSPLTTISGVW
YIWKVLVAFPLVSEEEEADDVPVEAEVILWRGWEDVETGNRGGRTKQTQSCSSKCEWRLR
RRTSTNLPSTL

>gi568815584r:61180095_61381147|GENSCAN_predicted_CDS_2|936_bp
atgcacttggggctagagtgtcagaagagtgagaatattaaagagtctttctcagtccct
gaggtctccttgaaccgggaagctttgctagataggcatacatcaaggctccgagcatta
catctcgctgtactctctcaatctgaattgtatgatcaaaaagccagtacaatttcgcat
agacgagcattgtcttcaggaaaaataagcacagatggaaccaaagctatgacagaacac
accccacaggcggtgggcttcactgacggttctatgctcagaaaccaactccggggaatt
cagaaacacactcccagaccatacaaggaagtcttacagctgcaccactgtgaaatgaca
ctggatgattacatctccaagttgatggagtatcctgtatttgaaagccattttagaatt
atagaaaataaggcccatggggacatggaggtcagcctaccaatgccagtatttccagat
gatctctactgttgtcttcaggaaaaggttgactaccagatgcccgttactgtggctcca
gagtccactaaacctctgagttattccaggaccagcgctatagctctggccgaggtgatc
aaaaaagttcccctcttgggtgtacacctgctaggaagactgtgctccctgacagaggag
atgtccttggatgaaggcgatcaggagccttcacctctcacaaccatttcaggagtgtgg
tacatttggaaggttctggtggcattcccattagttagtgaggaggaagaagctgatgat
gttcctgttgaggctgaggtgatcctatggagaggttgggaagatgtggaaacaggaaat
agaggaggccggactaagcagacacagagctgctcctctaagtgcgagtggagactcaga
agaagaactagcactaatctgccctctacactatga

>gi568815584r:61180095_61381147|GENSCAN_predicted_peptide_3|351_aa
MTWSATARGAHQPDNTAFTQQRLPAWQPLLSASIALPLFFCAGLAFIGLGLGLYYSSNGI
KELEYDYTGDPGTGNCSVCAAAGQGRALPPPCSCAWYFSLPELFQGPVYLYYELTNFYQN
NRRYGVSRDDAQLSGLPSALRHPVNECAPYQRSAAGLPIAPCGAIANSLFNDSFSLWHQR
QPGGPYVEVPLDRSGIAWWTDYHVKFRNPPLVNGSLALAFQGTAPPPNWRRPVYELSPDP
NNTGFINQDFVVWMRTAALPTFRKLYARIRQGNYSAGLPRGAYRVNITYNYPVRAFGGHK
LLIFSSISWMGGKNPFLGIAYLVVGSLCILTGFVMLVVYIRYQDQDDDDEE

>gi568815584r:61180095_61381147|GENSCAN_predicted_CDS_3|1056_bp
atgacctggagcgccacggcccggggcgcccaccagcccgacaacaccgccttcactcag
cagcgcctccccgcctggcagccgctgctgtcggccagcatcgcgctgccgctcttcttc
tgcgcgggcctggccttcatcggcctgggcctgggcctctactactcctccaacggcatc
aaggagctggagtacgactatacaggcgacccgggcaccggtaactgctcggtgtgcgcc
gcggctggccagggccgggcgctgccgcccccctgctcgtgcgcctggtacttctcgctg
cccgagctcttccagggcccagtgtacctctactacgagctgaccaacttctaccagaac
aaccggcgctacggcgtgtcccgcgacgacgcgcagctgagcggactccccagcgcgctg
cgccaccctgtcaacgagtgcgccccctaccagcgcagcgcggccggcctgcccatcgcg
ccctgcggcgccatcgccaacagcctcttcaacgactccttctcgctttggcaccagcgc
cagcccggcgggccctacgtcgaggtgccgctcgaccgctccggcatcgcctggtggacc
gactaccacgtcaagttccgcaacccgccgctggtcaacggcagcctggcgttggccttc
cagggcacggcgcccccgcccaactggcgccggccagtctacgagctcagccccgacccc
aacaacaccggcttcatcaatcaggacttcgtggtgtggatgcgcacggcggcgctgccc
acgttccgcaaactgtacgcgcgcatccgccagggcaactactcggccgggctgccgcgg
ggcgcctaccgcgtcaacatcacctacaactacccggtgcgcgcgttcggcggccacaag
ctcctcatcttcagcagcatctcgtggatgggtggcaagaaccccttcctgggcatcgcc
tacctggtcgtcggctccctctgcatcctcaccggctttgtcatgctggtcgtctacatt
cgctaccaggaccaggacgacgacgacgaggagtga

>gi568815584r:61180095_61381147|GENSCAN_predicted_peptide_4|551_aa
MLVVIWTMKPRLRWSQMEMRNLLNTGAILLPRDRWHFASEVERDDLKLEFMFKREAEHKS
LKNLQPDDAIEKKNPFSGGKFKLATEICISNKEPNVNCQDNGENVSRACHRDLGSSPSHH
RSGGLGGKLGFMGQAQGPSALCSLGTWHPASHALLLQLQLWLKGANIQLRLLLQKVQAPS
LGSFHLALGLQIHDYAGGSTLPFAENLQIRGLICHKERHVSPASEGLCKTTEVDPSGKGK
NAICFTAYNLLKAGFMPGNRGHGHTRSGFKSRSLIGERKRKENLSPAERAGRLSGSSGPM
VKYTGFIDWLEEVVSDLHRAQRSVGPGEEADHPTLIFYSANGFSTLPVPRFLFFTIHKVD
KREDGTAMLNMPSPQIRDRDVELHFLVPNPGSSPHPWPFKTEEIMGLLNVSWTLEKESEA
ELRSIGSILERCTPWHDLHSSVLGSKEFSIAHTATQLWGHKCGSDAMTYPFPSLATRKPE
AALQTTTSKATGFHGSTGARVKAVATKSHRSQDMEVQKPRALLKMACLSCREKQRQDNAE
RRELPDDVLLL

>gi568815584r:61180095_61381147|GENSCAN_predicted_CDS_4|1656_bp
atgctggtagtgatatggacaatgaagcccaggctgaggtggtctcagatggagatgagg
aacttattgaacactggagctatccttttgccaagagacagatggcattttgcctctgaa
gttgagagagacgatctgaaattggaatttatgtttaaaagggaagcagagcataaaagt
ttgaaaaatttgcagcctgatgatgcaatagaaaagaaaaacccattttctggggggaaa
ttcaagctggccacagaaatttgcataagtaacaaggagccaaatgttaattgccaagac
aatggggaaaatgtctccagggcatgtcacagagatcttggcagcagcccctcccaccac
agatctggaggcctaggaggaaaacttggtttcatgggccaggcccagggcccttctgct
ctgtgcagccttggaacatggcaccctgcatcccatgcactgctgcttcagctccagctg
tggctaaaaggggccaacatacagctcaggctgttgcttcagaaggtgcaagccccaagc
cttggcagcttccacttggcgttgggcctgcagatccatgactatgcagggggctcaacc
ctgccatttgcagagaaccttcaaatcagagggcttatatgccataaagaaaggcatgta
agtcctgcttcagaaggactgtgtaaaacaactgaagtggacccctctgggaaaggcaag
aatgctatatgcttcacagcctataatttgcttaaggcaggatttatgccaggaaatcga
ggacatggacacacgagaagtggatttaagagcagaagtttaataggcgaaagaaagaga
aaagagaatctctctcctgcagagagagcggggcgcctgagtgggtcttccggtcccatg
gtgaagtacacaggttttatagactggcttgaggaggtggtgtctgatttacatagggcc
caaagatcggttggaccaggagaagaagctgaccaccccaccctaatcttttattctgca
aatggattttctaccttgccagtgccacgttttctgttctttaccattcacaaggttgac
aaaagggaagatggaactgccatgctgaacatgcctagcccccagattagggatcgtgat
gtggagctgcacttcctggttccaaatcctggctcttcccctcatccctggcccttcaag
acagaggagattatggggctactgaacgtatcttggactttagagaaagaaagtgaagct
gagctgagatccattggttctattttggaaagatgcaccccgtggcatgaccttcacagc
tcagttctggggtcaaaggaattttccattgctcacactgccacccaactctgggggcat
aagtgtggaagtgatgcaatgacttatcctttcccttctctggccactaggaaacctgag
gcagccctgcagactaccaccagcaaggccacaggatttcatggcagcactggtgccaga
gtcaaagctgtggcaaccaaaagccatagaagccaagatatggaggtgcaaaaaccaaga
gccttgctgaagatggcctgcctgagctgcagagagaagcagaggcaagacaatgcagag
agaagggagctgcctgatgacgttctactcctgtga

>gi568815584r:61180095_61381147|GENSCAN_predicted_peptide_5|480_aa
MVEGKEKQVTSYMDGSRAGPRTAGHAPGVRKARERTRGFCELGTWRCEVLAGDAAAAAAS
WFEARRVGESGCLDSCTCPEGWPETGLPVLPLRSSAAPRGRGSGAGMSSGTMKFNGYLRV
RIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCA
NVTDGGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVSSGDPFPLCPPN
PRSPYVFQNSPGSRFPIALWLREFPPDFGLRPRGRGTGDATAVGQRLGLTGSRAGVQGGH
PFRPVFGLFPDSCLQMPFPALFIFLPGAHPQETALAKPRSDSVVSNLLERKRATSKVVES
AGWLPCDQTCSFKASGASCGTINPAAAEVSPDVIATEVTVDEVIVGKRPCTAMSSPLAAS
CRVFCLIPDTRRLLQTELRGKALQAEQALQSCCSVGQGSADFMLCALGHMSDPPVDISHQ

>gi568815584r:61180095_61381147|GENSCAN_predicted_CDS_5|1443_bp
atggtggaaggcaaggagaagcaagtcacatcttacatggatggcagcagggccgggccg
cggaccgcgggccacgcccctggggtccggaaggcgcgggagcggacgcgggggttctgt
gaacttggaacctggcggtgcgaggttctcgccggggatgcggcggcggcagctgcttcc
tggtttgaagctcgccgagtgggggagagcggctgcctcgactcctgcacctgtcccgag
ggctggcctgagacgggactcccggttctcccgctgcgaagcagcgcggccccccggggc
cggggcagcggcgccggcatgtcgtctggcaccatgaagttcaatggctatttgagggtc
cgcatcggtgaggcagtggggctgcagcccacccgctggtccctgcgccactcgctcttc
aagaagggccaccagctgctggacccctatctgacggtgagcgtggaccaggtgcgcgtg
ggccagaccagcaccaagcagaagaccaacaaacccacgtacaacgaggagttttgcgct
aacgtcaccgacggcggccacctcgagttggccgtcttccacgagacgcccctgggctac
gaccacttcgtggccaactgcaccctgcagttccaggagctgctgcgcacgaccggcgcc
tcggacaccttcgagggttgggtgagtagcggtgaccccttccctttgtgtccacccaac
ccccgttccccttatgtttttcaaaactcacccgggtcccgctttcccatcgctttgtgg
ctgagggaattccctccagactttggtcttcgtccacgtggccgcggcactggtgacgcg
accgcggtgggacagcggcttggcctaacgggaagtcgggcaggggtccagggcggtcac
cctttccgcccagtctttggcctcttccctgacagctgtctgcagatgcccttccctgcc
ctgttcatttttcttcccggtgcccatccccaggagactgcgctggcgaagcccaggagt
gacagtgtagtcagtaacttacttgagaggaaaagagccacaagcaaggtagtggagagt
gctggatggttgccttgtgaccagacctgttcttttaaggcctctggagccagctgtggg
acgatcaatccagcagctgcagaggtcagccctgatgtaattgccaccgaggtcaccgtg
gatgaggtcattgtggggaaaaggccctgtactgccatgtcctcccctctggctgcttca
tgccgggtcttctgcctaatacctgacacaaggagactcctccagactgaactgcgagga
aaggctttacaggcagaacaggctctgcagagttgctgctcagtaggccaggggtcagca
gacttcatgctgtgtgccttaggccacatgagtgatcctcctgtagatatttcccatcag
tga

>gi568815584r:61180095_61381147|GENSCAN_predicted_peptide_6|157_aa
MGHGNKQLQKRGEAKCADMEDEVFKGEMTVDDLGDDRVPIGALPSGAVGRQTLSSRPQNG
RSTDSLHLAPGKATGTQRHESSRRGCTLHRHRVELPKTFGAHPLHRKNIRQTQFEGHSIK
YLTRTCQAVKLTKTKESLRNCHRLEEPKQTYKHDVVS

>gi568815584r:61180095_61381147|GENSCAN_predicted_CDS_6|474_bp
atgggacatggaaacaagcagcttcaaaagagaggagaagccaaatgtgcagatatggaa
gatgaggtctttaaaggggagatgacagtagatgacctgggagatgacagagtccccatt
ggggcactacctagtggagctgtgggaagacagacattgtcctccagaccccagaatggt
agatccactgacagcttgcatcttgcacctggaaaagccacaggcactcaacgccacgaa
agcagtcgcaggggctgtaccctgcataggcacagagtagaactgcccaagacattcgga
gcccaccccttgcatcggaaaaacattagacaaacccaatttgaaggacattctataaaa
tacctgacgaggacttgtcaagctgtcaagctcaccaaaaccaaggaaagtctgagaaac
tgtcacagactagaagaacctaagcagacatataaacatgatgtggtatcttga