GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:27:59

Sequence gi568815593r:76977177_77177878 : 200702 bp : 41.08% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  21400  21567  168  0  0   59   92    65 0.373   3.58
 1.02 Intr +  24597  24632   36  2  0   89   91    76 0.662   5.54
 1.03 Intr +  32663  32795  133  1  1   82   86   113 0.833   9.80
 1.04 Intr +  53323  53431  109  2  1  107   89    14 0.113   1.82
 1.05 Intr +  53512  53800  289  1  1   51   85   414 0.642  33.73
 1.06 Intr +  57242  57344  103  1  1   98   68    47 0.766   2.53
 1.07 Intr +  58365  58567  203  1  2   86   90   161 0.868  14.18
 1.08 Intr +  59380  59544  165  0  0   54   84   175 0.999  12.94
 1.09 Intr +  62355  62543  189  2  0   33   90   145 0.991   8.06
 1.10 Intr +  69171  69501  331  2  1  111  113   321 0.996  31.18
 1.11 Intr +  70985  71096  112  0  1  119   93    -3 0.998   1.82
 1.12 Intr +  71760  71811   52  0  1   55  121   103 0.996   8.29
 1.13 Intr +  75530  75631  102  1  0   35  109    84 0.951   4.65
 1.14 Intr +  76789  76954  166  0  1   80   76   170 0.999  13.61
 1.15 Intr +  78338  78420   83  0  2   91   94    79 0.999   7.24
 1.16 Intr +  82440  82567  128  2  2   39   88   164 0.996  10.06
 1.17 Intr +  84527  84626  100  2  1   37  111    98 0.994   6.19
 1.18 Term +  85876  86076  201  0  0   74   49   206 0.908  11.71
 1.19 PlyA +  86246  86251    6                               1.05

 2.03 PlyA -  86505  86500    6                               1.05
 2.02 Term -  99972  99663  310  2  1   71   49   265 0.995  14.45
 2.01 Init - 100297 100002  296  1  2   52   17   466 0.818  30.61
 2.00 Prom - 106422 106383   40                              -5.75

 3.02 PlyA - 106632 106627    6                               1.05
 3.01 Sngl - 107249 106914  336  2  0   63   53   156 0.490   5.38
 3.00 Prom - 109137 109098   40                              -5.35

 4.03 PlyA - 109165 109160    6                               1.05
 4.02 Term - 110081 109404  678  2  0  120   34   138 0.252   4.30
 4.01 Init - 118673 118494  180  2  0   67   78   174 0.960  13.53
 4.00 Prom - 121023 120984   40                              -4.05

 5.00 Prom + 123732 123771   40                              -6.15
 5.01 Init + 132917 132924    8  1  2  103  100     0 0.034   3.25
 5.02 Intr + 135754 135919  166  1  1   45   86    98 0.033   4.34
 5.03 Intr + 140420 140548  129  1  0   67   63    60 0.023   1.37
 5.04 Term + 141144 141260  117  2  0   97   51   116 0.173   6.36
 5.05 PlyA + 142675 142680    6                               1.05

 6.00 Prom + 152896 152935   40                              -6.05
 6.01 Init + 157716 157767   52  2  1  105   71   100 0.874  11.37
 6.02 Term + 160400 160521  122  0  2   60   48   122 0.791   3.06
 6.03 PlyA + 162223 162228    6                               1.05

 7.05 PlyA - 162817 162812    6                               1.05
 7.04 Term - 167299 166735  565  0  1  105   43   150 0.224   5.08
 7.03 Intr - 177394 177296   99  0  0   29   82   116 0.196   3.41
 7.02 Intr - 192051 191977   75  2  0   51   94    62 0.016   0.81
 7.01 Init - 198279 198203   77  0  2   35   97    53 0.103   1.51

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:76977177_77177878|GENSCAN_predicted_peptide_1|889_aa
MGTHGHKDSNDRYWGLQEEGGKERGRVGNLTTVYHAQYLGDGITRTPDLSIIQYTQVVDV
FLIDESSLAKVKVQCALIHIGPPSVTIGVPLSALGHHLPTCYRKTCSVKTVKAGEGSFQE
SFPVCRPRTSGRGHPRSPCSLLAAPFGYNGLWVRRRPFRPERSPSAATSSLAPELMASEA
PSPPRSPPPPTSPEPELAQLRRKVEKLERELRSCKRQVREIEKLLHHTERLYQNAESNNQ
ELRTQVEELSKILQRGRNEDNKKSDVEVQTENHAPWSISDYFYQTYYNDVSLPNKVTELS
DQQDQAIETSILNSKDHLQVENDAYPGTDRTENVKYRQVDHFASNSQEPASALATEDTSL
EGSSLAESLRAAAEAAVSQTGFSYDENTGLYFDHSTGFYYDSENQLYYDPSTGIYYYCDV
ESGRYQFHSRVDLQPYPTSSTKQSKDKKLKKKRKDPDSSATNEEKDLNSEDQKAFSVEHT
SCNEEENFANMKKKAKIGIHHKNSPPKVTVPTSGNTIESPLHENISNSTSFKDEKIMETD
SEPEEGEITDSQTEDSYDEAITSEGNVTAEDSEDEDEDKIWPPCIRVIVIRSPVLQIGSL
FIITAVNPATIGREKDMEHTLRIPEVGVSKFHAEIYFDHDLQSYVLVDQGSQNGTIVNGK
QILQPKTKCDPYVLEHGDEVKIGETVLSFHIHPGSDTCDGCEPGQVRAHLRLDKKDESFV
GPTLSKEEKELERRKELKKIRVKYGLQNTEYEDEKTLKNPKYKDRAGKRREQVGSEGTFQ
RDDAPASVHSEITDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTHAGLGTGKP
SSFEDVHLLQNKNKKNWDKARERFTENFPETKPQKDDPGTMPWVKGTLE

>gi568815593r:76977177_77177878|GENSCAN_predicted_CDS_1|2670_bp
atgggtactcatggacataaagatagcaacgatagatactggggactacaagaggaggga
gggaaggagaggggaagggttggaaatctaactactgtgtaccatgctcaatacctgggt
gatggaatcactcgtaccccagacctcagcattatacaatatacccaggttgttgatgtt
tttctcatcgacgagagctctttggctaaggtgaaggtgcaatgtgcccttatccacatt
gggccaccatcagttacaatcggtgtgcccttatccgcactgggccaccatcttcctact
tgttacagaaaaacctgctctgtaaagacagttaaggctggagaaggtagtttccaggaa
agttttccggtttgcaggccgcgcacatcgggcaggggccatcctcggtccccttgctcg
ttgctcgcagccccgttcggctacaatggtctctgggtccgccggcgtccgtttcggcct
gaacgcagcccctccgcggcgacgagcagtctcgcgccggagctcatggcctcggaggcg
ccgtccccgccgcggtcgccgccgccgcccacctcccccgagcctgagctggcccagcta
aggcggaaggtggagaagttggaacgtgaactgcggagctgcaagcggcaggtgcgggag
atcgagaagctgctgcatcacacagaacggctgtaccagaacgcagaaagcaacaaccag
gagctccgcacgcaggtggaagaactcagtaaaatactccaacgtgggagaaatgaagat
aataaaaagtctgatgtagaagtacaaacagagaaccatgctccttggtcaatctcagat
tatttttatcagacgtactacaatgacgttagtcttccaaataaagtgactgaactgtca
gatcaacaagatcaagctatcgaaacttctattttgaattctaaagaccatttacaagta
gaaaatgatgcttaccctggtaccgatagaacagaaaatgttaaatatagacaagtggac
cattttgcctcaaattcacaggagccagcatctgcattagcaacagaagatacctcctta
gaaggctcatcattagctgaaagtttgagagctgcagcagaagcggctgtatcacagact
ggatttagttatgatgaaaatactggactgtattttgaccacagcactggtttctattat
gattctgaaaatcaactctattatgatccttccactggaatttattactattgtgatgtg
gaaagtggtcgttatcagtttcattctcgagtagatttgcaaccttatccgacttctagc
acaaaacaaagtaaagataaaaaattgaagaagaaaagaaaagatccagattcttctgca
acaaatgaggaaaaggatttgaactcagaggatcaaaaagccttcagtgttgaacataca
agctgcaatgaggaagaaaatttcgcaaatatgaaaaagaaggccaaaataggcattcat
cacaaaaatagtccccccaaagtcactgttccaactagtggaaatactatagagtctcct
cttcatgaaaacatctctaattcaacatcatttaaagatgagaaaatcatggagactgat
agtgaaccagaggaaggtgaaattacagactctcagactgaggatagttatgacgaagcc
attaccagtgaaggcaatgtaactgcagaagatagtgaggatgaagatgaagacaaaatt
tggcccccatgtattagagtaattgtcattagatcacctgtgttgcagataggatcactc
tttatcattactgctgtaaaccctgctacaattggaagagaaaaggatatggaacatact
ctccgaatccctgaagttggtgtcagtaagtttcatgcagaaatttattttgaccatgac
ttacaaagttatgtccttgtggatcaaggcagtcaaaatggcacaattgttaatggaaaa
cagattcttcagccgaaaactaaatgtgacccttacgtacttgagcatggagatgaagtc
aaaattggagaaactgtcttatcctttcacattcatcctggcagtgatacctgtgatggc
tgtgaaccagggcaggttagagcccaccttcgccttgataagaaagatgaatcttttgtt
ggtccaacactaagtaaggaggaaaaagagttggaaagaagaaaagaattaaagaaaata
cgagtaaaatatggtttacagaatacagaatacgaagatgaaaagacattgaagaatcca
aaatataaagatagagctggaaaacgtagggagcaggttggaagtgaaggaactttccaa
agagatgatgctcctgcatctgttcattctgaaattactgatagcaacaaaggtcggaag
atgttggagaagatgggttggaagaaaggagagggcctggggaaggatggtggaggaatg
aaaacgccgatccagcttcagcttcggcgaacacatgcaggcttggggacaggcaaacca
tcctcatttgaagatgttcaccttctccaaaacaagaacaaaaaaaactgggacaaagca
cgagagcggtttactgaaaacttcccagaaactaagcctcaaaaagatgacccagggacc
atgccttgggtaaaagggactttagagtga

>gi568815593r:76977177_77177878|GENSCAN_predicted_peptide_2|201_aa
MGALAVRGSRRERELERRELAVEQGERALERRRRALQEEERAAAQARRELQAEREALQAR
LRDVSRREGALGWAPAAPPPLKDDPEGDRDGCVITKVLLTALLRPMPMPSDPAGTEAVTE
ARPAAATHSEAPANCRIFHTLRLQLEKHFEARAEPKLTSMGSPGVPGRPFVGMHARNWGG
TRDTRELQEPREPRPPSAMAT

>gi568815593r:76977177_77177878|GENSCAN_predicted_CDS_2|606_bp
atgggcgcgctggccgtgcgcggcagccggcgggagcgggagctggagcggcgcgagctg
gccgtggagcagggcgagcgcgccctggagcggaggcggagggcgctgcaggaggaagag
cgcgccgcggcccaggcgcgccgggaactgcaggccgagcgggaggcgctgcaggcgcgg
ctgcgggatgtgagccgccgtgagggcgccctgggctgggcccccgctgcgccgccgccg
ctcaaggacgaccccgagggtgacagggacggctgcgtcatcacaaaggtcctcctgaca
gcgcttctccgtccaatgccaatgccttcagaccccgctgggaccgaagccgtaaccgaa
gccaggcccgcagccgctactcactcggaagctccagctaactgtaggatcttccacacc
ctaaggcttcagcttgagaagcacttcgaagccagagcagaaccaaaactcacttccatg
gggtcaccgggggtgcctgggcggcctttcgtgggcatgcacgcaaggaattggggtggc
acacgggacacccgagagctccaggagccccgtgaacccagaccacccagtgccatggcc
acttag

>gi568815593r:76977177_77177878|GENSCAN_predicted_peptide_3|111_aa
MRVKRKGLLVYKTIRSREIYSLAQEQYGRNRARDSIISHQFHPTTRGNYGSRIQDEIWVG
TQPNHITQVSELLLEASLSQPDRTLPEGKDYVTFLLECLAESTHLTLAGAQ

>gi568815593r:76977177_77177878|GENSCAN_predicted_CDS_3|336_bp
atgagggtcaagcgaaaagggcttctcgtttataaaaccatcagatctcgtgagatttat
tcactagcacaagaacagtatgggagaaaccgcgctcgtgattcaattatctctcaccag
ttccatcccacaacacgtgggaattatgggagtaggattcaggatgagatttgggtgggg
acacagccaaaccatatcacacaggtatcagaattattgttggaagcatctctttcccaa
ccagaccgtacgcttcctgagggcaaagactatgtgacgttcctcttggaatgcttggca
gaaagcacgcacctgaccttagcaggtgcacaatga

>gi568815593r:76977177_77177878|GENSCAN_predicted_peptide_4|285_aa
MKSAKARINLKFVVKLGEKNGKIIDTLQKVYGDNAPKKLDVYKWISVRRDETMLKMKPIT
TCECSAVSLRGTRGGFPSGTKCQRGAWRGIYHLGLPTRRRLRPRFPGKGVSVGFQTRWRG
GLGRAAGSAGEQRPRTPLPASLAPARGVPFAGLPFSGPAVATVRKQVGPGFCGKAPLTVF
QCLILAPSLHSSFDKLVRNVEIRHHSPALPLLKLSDYSLFTGQVTGRPAVGSFCNWDLLD
VAHFRREKANASQKLTPESPPLPHPSWPPNKRIFRSFRSPLEQFL

>gi568815593r:76977177_77177878|GENSCAN_predicted_CDS_4|858_bp
atgaagtcggctaaagcaagaatcaacctcaaatttgtggtgaagcttggggagaagaat
ggtaaaatcatcgatactttacagaaagtttatggggacaatgccccaaagaaattagat
gtttacaaatggataagtgtaagaagggatgagacaatgttgaagatgaagcccatcacg
acgtgtgaatgcagcgctgtgtctttaaggggcacgcgcggaggttttccgtccgggaca
aaatgtcagcgaggcgcctggagggggatctaccatctcggactcccgacccgccgccgg
ctccggccgcgtttcccgggtaaaggggtgagtgtgggcttccagactcggtggcgaggc
gggctgggccgggcagcggggagcgcaggtgagcagcgaccgcggacgcccctgccggcc
tccctggcacccgcgcggggcgtgcccttcgctgggctgcccttctccgggccggctgtc
gcgactgtgagaaagcaggtgggcccgggattctgtggcaaggccccgctcaccgtcttc
cagtgcctcattcttgctccttccctgcactcctctttcgacaagcttgttcggaatgtg
gaaattcgtcaccactctcctgctctccctttattaaagttgtctgattacagtcttttc
actgggcaagtgactggacgccctgcagtgggttctttctgtaactgggacttgcttgat
gtcgcccactttcggagggagaaagcgaatgcaagccaaaagcttacaccagaatcccca
cccctcccccacccctcatggcccccaaacaaaagaattttccgctcctttcggagtccg
ctggagcagtttctgtga

>gi568815593r:76977177_77177878|GENSCAN_predicted_peptide_5|139_aa
MPQIKYLGIQLKKDVTDFFKENYKPLLNEIKEDTNKWKNIQCSWIGRINIMKMAILPKET
WVHQFRRSLFTIYQTARLVMIWKMFIQKPAAKRGGQSQRQEENTDPGAEHEDRAGRRRKW
KEGSFSLSLILLGLDAGES

>gi568815593r:76977177_77177878|GENSCAN_predicted_CDS_5|420_bp
atgccccaaataaaatacctaggaatccaacttaaaaaggatgtgacggacttcttcaag
gagaactacaaaccactgctcaatgaaataaaagaggacacaaacaaatggaagaatatt
caatgctcatggataggaagaatcaatatcatgaaaatggccatactgcccaaggaaacc
tgggtccaccagttccggagatccttgtttactatataccagacagcgaggctggtgatg
atctggaagatgtttattcagaagccagcagccaaaaggggtggacagagccagaggcag
gaagaaaacacagatcctggtgccgaacatgaggacagggcaggccgaaggagaaagtgg
aaggaggggagcttctctctcagcctcatccttctgggcctggatgctggagagtcatga

>gi568815593r:76977177_77177878|GENSCAN_predicted_peptide_6|57_aa
MGNWIYGGKEMDCGSPGVSSRKVRSTSSGIPVSASGPLCTLQKKAPYGNIKSHLCSS

>gi568815593r:76977177_77177878|GENSCAN_predicted_CDS_6|174_bp
atggggaactggatctatggaggaaaagaaatggactgtggcagtcctggagtgtcttca
cgcaaagtaagaagcacaagcagtggaattccagtgtcagcaagtggccctctgtgtacc
ctgcagaaaaaggctccctacggaaacataaagtcacacctttgctccagctaa

>gi568815593r:76977177_77177878|GENSCAN_predicted_peptide_7|271_aa
MQRSGENRIPGKGIANAKSLRQEKAWSDCVGATGNTLFPKASKQNQTQPPSIYAGDVGRP
NAEDLNLVPSFMTDSPDGPLHDLSGHRPYDSYSLVLYLPFGATQFSLLFHLTALQIFENF
ENSFLSPLQLIFFRPTHVVHSTAPSLTQFPDSSVPIAPLWRHSNFSTAPGDILTAKTWTQ
CLRCGPTAPQSSGADTTLLLDTSLVNPCSFEQIYKIMDQRLRFLMSGFFSYEATSRLLYP
PCSQETFSVLGPNLVSQILMYANNFKQTRAV

>gi568815593r:76977177_77177878|GENSCAN_predicted_CDS_7|816_bp
atgcaaagatctggggagaataggattccagggaagggaattgcaaatgcaaaatcctta
aggcaggaaaaagcttggtctgactgtgttggtgctacgggaaacactttgtttccaaaa
gcaagcaaacaaaatcaaacacaaccaccaagtatatatgcaggggatgtgggcaggcca
aatgcagaggaccttaacctggttcccagtttcatgaccgattctcctgacgggcctctg
catgatcttagcggacaccgtccctatgactcgtactcattggtcctgtatttaccgttt
ggagccacgcaattttcactgctcttccacctgacagcacttcaaatctttgaaaacttt
gaaaacagcttcttgtccccgctgcaacttatcttcttcaggccaacacacgttgttcat
tcaactgctccttctttgacccagtttccagattcttctgtccccattgctcccctctgg
aggcactccaatttctcaacagcccctggagacatcctgactgccaagacctggacccag
tgcctgagatgtggtcctactgccccacagagcagtggggctgacactaccctcctcctg
gacacttctcttgtgaatccatgctcttttgagcagatttacaaaataatggaccaaagg
ctgagatttctcatgtctggattcttctcgtatgaggcaacttcacgtttgctttaccct
ccatgtagccaggaaacattttctgttcttggaccgaacttagtttcccaaatactgatg
tatgcaaacaacttcaagcagaccagggctgtgtga