GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:24:48

Sequence gi568815587r:77916596_78117270 : 200675 bp : 43.64% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 Intr -   2383   2226  158  1  2   68   91   125 0.422   9.61
 1.10 Intr -  11952  11747  206  1  2  100  105   206 0.997  22.42
 1.09 Intr -  22230  22056  175  0  1   85  115    91 0.998  11.01
 1.08 Intr -  24656  24585   72  2  0   97   44    93 0.939   5.40
 1.07 Intr -  39467  39347  121  1  1   75  111    91 0.993  10.60
 1.06 Intr -  42239  42151   89  2  2   86   86    59 0.958   4.27
 1.05 Intr -  44543  44358  186  2  0   86   54    55 0.445   1.79
 1.04 Intr -  62507  62401  107  0  2   80  116    59 0.963   7.83
 1.03 Intr -  64981  64864  118  1  1  110  106    77 0.980  11.74
 1.02 Intr -  74704  74513  192  1  0   96  116    19 0.942   5.19
 1.01 Init -  78048  77995   54  0  0   94  115    68 0.986  11.38
 1.00 Prom -  86465  86426   40                              -4.56

 2.03 PlyA -  87169  87164    6                               1.05
 2.02 Term - 100675  99998  678  1  0  102   42   810 0.964  71.49
 2.01 Init - 106615 106565   51  1  0   91  127    30 0.932   6.50
 2.00 Prom - 108535 108496   40                              -5.36

 3.00 Prom + 108549 108588   40                              -2.56
 3.01 Init + 109990 109992    3  0  0  108  101     0 0.346   3.30
 3.02 Intr + 118358 118477  120  1  0   38   41   129 0.229   3.89
 3.03 Intr + 127759 127837   79  0  1   66   48    61 0.000  -0.98
 3.04 Intr + 145558 145611   54  2  0  148   82    42 0.251   8.55
 3.05 Term + 147276 147727  452  1  2   29   41   685 0.233  53.25
 3.06 PlyA + 149206 149211    6                               1.05

 4.04 PlyA - 149741 149736    6                              -0.45
 4.03 Term - 151117 151053   65  2  2   30   49    99 0.196  -1.75
 4.02 Intr - 156546 156403  144  1  0   54   63    61 0.233   0.45
 4.01 Init - 163149 162984  166  0  1   94  105   288 0.972  29.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 136164 136070   95  0  2   71   80    53 0.938   2.65
S.002 Init + 166901 166937   37  1  1   92  110    49 0.862   7.70


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:77916596_78117270|GENSCAN_predicted_peptide_1|493_aa
MAAHLKKRVYEEFTKVVQPQEEIATKKLRLTKPSKSAALHIDLCKATSPADALQYLLQFA
RKPVEAESVEGVVRILLEHYYKENDPSVRLKIASLLGLLSKTAGFSPDCIMDDAINILQN
EKSHQVLAQLLDTLLAIGTKLPENQAIQMRLVDVACKHLTDTSHGVRNKCLQLLGNLGSL
EKSVTKDAEGLAARDVQKIIGDYFSDQDPRVRTAAIKAMACKLLSDDYEQVRSAAVQLIW
VVSQLYPESIVPIPSSNEEIRLVDDAFGKICHMVSDGSWVVRVQAAKLLGSMEQVSSHFL
EQTLDKKLMSDLRRKRTAHERAKELYSSGEFSSGRKWGDDAPKEEVDTGAVNLIESGACG
AFVHGLEDEMYEVRIAAVEALCMLAQSSPSFAEKCLDFLVDMFNDEIEEVRLQSIHTMRK
ISNNITLREDQLDTVLAVLELPGRKLVSSAVSPSIIPQEDPSQQFLQQSLERVYSLQHLD
PQGAQELLEFTIS

>gi568815587r:77916596_78117270|GENSCAN_predicted_CDS_1|1479_bp
atggcggcgcaccttaagaagcgggtttatgaggaattcacgaaagtggttcagccacag
gaggaaattgctactaagaaactccgactaacaaaaccaagtaaatctgcagcactccac
atagatctgtgtaaagctacctccccagcagatgctttgcaatacttgctccagtttgcc
aggaagcctgtcgaggcggaaagcgtagagggagtagtcaggattctcttggaacattat
tacaaggagaatgatccatctgtgagactgaaaattgcatcattgttgggtttattatca
aagacagcaggattttcaccagactgcattatggatgatgccatcaacatcctgcagaat
gaaaagtctcatcaagtcctagctcaactgctggatactttgcttgcaattggcactaag
ctaccagagaatcaagctatccaaatgcgattagttgatgtggcctgcaagcatctgaca
gatacgtctcatggtgtaagaaataagtgcctgcagttacttggcaatcttggctctttg
gagaaaagtgtcacaaaagatgcagaaggcctagctgccagagatgtccagaagattata
ggggattacttcagtgaccaagacccacgtgtcagaacagcagctataaaagccatggcc
tgtaaattactctctgatgactatgaacaagtgcgcagtgctgcagtccagcttatctgg
gtcgtcagtcagctctatcctgaaagcattgtcccaattccttcttctaatgaagaaata
cgcttagttgatgatgcgtttggcaaaatttgtcacatggtcagtgatggctcttgggtg
gttcgtgttcaggcagcaaaactgttgggctctatggagcaagtcagttctcatttcttg
gagcagacccttgacaagaagctgatgtcagatctgaggaggaaacgtactgcacatgag
cgtgccaaggaactttacagttcgggggagttttccagtggcagaaagtggggagatgat
gctcccaaggaagaagtagataccggggctgtgaacttgattgagtcaggagcttgtgga
gcttttgttcatgggttggaagatgagatgtatgaggttcgtattgctgctgtggaggcc
ctctgcatgttggcccagtcttcaccctcttttgctgagaagtgccttgatttcctagtt
gacatgttcaacgatgaaattgaggaagtacgtctgcagtctatacataccatgagaaaa
atctctaacaacatcaccctccgagaagatcagcttgacactgtcctggctgtgctagag
ttaccaggtagaaaactggtgtcatcagctgtttctcccagcatcatacctcaagaggat
ccttcccagcagttcctgcagcagagccttgaaagagtgtatagtcttcagcacttggac
cctcagggagcccaggagctgctggaattcaccatcagn

>gi568815587r:77916596_78117270|GENSCAN_predicted_peptide_2|242_aa
MTSQTPLPQSPRPRRPTMSTVVELNVGGEFHTTTLGTLRKFPGSKLAEMFSSLAKASTDA
EGRFFIDRPSTYFRPILDYLRTGQVPTQHIPEVYREAQFYEIKPLVKLLEDMPQIFGEQV
SRKQFLLQVPGYSENLELMVRLARAEAITARKSSVLVCLVETEEQDAYYSEVLCFLQDKK
MFKSVVKFGPWKAVLDNSDLMHCLEMDIKAQGYKVFSKFYLTYPTKRNEFHFNIYSFTFT
WW

>gi568815587r:77916596_78117270|GENSCAN_predicted_CDS_2|729_bp
atgacgagccagacccctctgccccagtccccccggcccaggcggccaacgatgtctact
gttgtggagctgaacgtcgggggtgagttccacaccaccaccctgggtaccctgaggaag
tttccgggctcaaagctggcagagatgttctctagcttagccaaggcctccacggacgcg
gagggccgcttcttcatcgaccgccccagcacctatttcagacccatcctggactacctg
cgcactgggcaagtgcccacacagcacatccctgaagtgtaccgtgaggctcagttctac
gaaatcaagcctttggtcaagctgctggaggacatgccacagatctttggtgagcaggtg
tctcggaagcagtttttgctgcaagtgccgggctacagcgagaacctggagctcatggtg
cgcctggcacgtgcagaagccataacagcacggaagtccagcgtgcttgtgtgcctggtg
gaaactgaggagcaggatgcatattattcagaggtcctgtgttttctgcaggataagaag
atgttcaagtctgttgtcaagtttgggccctggaaggcggtcctagacaacagcgacctc
atgcactgcctggagatggacattaaggcccaggggtacaaggtattctccaagttctac
ctgacgtaccccaccaaaagaaacgaattccattttaacatttattcattcaccttcacc
tggtggtga

>gi568815587r:77916596_78117270|GENSCAN_predicted_peptide_3|235_aa
MPEIEVNLQRNIELRVDENLIAGYHLSTDEALPKALPLEFPKNLPEKDLVEESFYLGVRG
LRQNETGGVGGIIIQQISPEAVEEAEEATMQVLTKRYPKNCLLTVMDRYAAEVHNMEQVV
MIPSLLRDVQLSGPGGQAQAEAPDLYTYFTMLKAICVDVDHGLLPREEWQAKVAGSEENG
TAETEEVEDESASGELDLEAQFHLHFSSLHHILMHLTEKAQEVTRKYQEMTGQVW

>gi568815587r:77916596_78117270|GENSCAN_predicted_CDS_3|708_bp
atgcctgagattgaagttaacctacaaaggaacatagaactaagagttgatgagaacctg
attgccggctatcatttgagcactgatgaagctctgcctaaggccctacccctggagttt
ccgaaaaatcttcctgaaaaggacctggtggaagagagcttctatctaggggtgagggga
ctccggcagaatgagactggaggcgtgggaggtatcatcattcagcagatttcaccagag
gcagtggaggaggcagaggaagcaaccatgcaggtgctaaccaagcgttaccccaagaac
tgcctgctgaccgtcatggaccggtatgcagccgaggtgcacaacatggagcaggtggtg
atgatccccagccttctgcgggacgtgcagctgagtgggcctgggggccaggcccaggct
gaggcccctgatctctacacctacttcaccatgctcaaggccatctgtgtggatgtggac
catgggctgctgccgcgggaggagtggcaggccaaggtggcaggcagcgaagagaatgga
accgcagagacagaggaagtcgaggacgagagtgcctcaggagagctggacctggaagcc
cagttccacctgcacttctccagcctccatcacatcctcatgcacctcaccgagaaagcc
caggaggtgacaaggaaataccaggaaatgacgggacaagtttggtag

>gi568815587r:77916596_78117270|GENSCAN_predicted_peptide_4|124_aa
MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNLIRRRPIATAGLHRQ
LLYITAFFFAGYYLVKREDYLYAVRDREMFGYMKLHPEDFPEEVNCSADLIKESVFYHVK
GSVE

>gi568815587r:77916596_78117270|GENSCAN_predicted_CDS_4|375_bp
atgatcgcacggcggaacccagaacccttacggtttctgccggatgaggcccggagcctg
cccccgcccaagctgaccgacccgcggctcctctacatcggcttcttgggctactgctcc
ggcctgattgataacctaatccggcggaggccgatcgcgacggctggtttgcatcgccag
cttctatatattacggcctttttttttgctggatattatcttgtaaaacgtgaagactac
ctgtatgctgtgagggaccgtgaaatgtttggatatatgaaattacatccagaggatttt
cctgaagaagtgaactgctccgccgacctcatcaaagagtctgtcttctatcatgtgaag
ggatctgtggagtga