Result of FASTA (omim) for pF1KB8756
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8756, 200 aa
  1>>>pF1KB8756 200 - 200 aa - 200 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.6994+/-0.00042; mu= 17.5383+/- 0.026
 mean_var=83.6813+/-17.625, 0's: 0 Z-trim(113.0): 341  B-trim: 1121 in 2/51
 Lambda= 0.140204
 statistics sampled from 21684 (22115) to 21684 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.259), width:  16
 Scan time:  4.110

The best scores are:                                      opt bits E(85289)
NP_997625 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 1305 273.4 1.6e-73
NP_005729 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 1305 273.4 1.6e-73
NP_001032241 (OMIM: 604786) ADP-ribosylation facto ( 200) 1305 273.4 1.6e-73
NP_001182325 (OMIM: 604786) ADP-ribosylation facto ( 200) 1305 273.4 1.6e-73
NP_005728 (OMIM: 604787) ADP-ribosylation factor-l ( 192)  921 195.8 3.9e-50
NP_001269360 (OMIM: 604787) ADP-ribosylation facto ( 201)  921 195.8   4e-50
NP_001652 (OMIM: 600732) ADP-ribosylation factor-l ( 201)  819 175.1 6.5e-44
XP_011523084 (OMIM: 600732) PREDICTED: ADP-ribosyl ( 201)  819 175.1 6.5e-44
NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 ( 180)  515 113.6 1.9e-25
XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 181)  505 111.6 7.9e-25
NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 ( 181)  505 111.6 7.9e-25
NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 ( 175)  504 111.4 8.9e-25
NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 ( 180)  499 110.4 1.8e-24
NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 ( 181)  498 110.2 2.1e-24
NP_001019398 (OMIM: 103180) ADP-ribosylation facto ( 181)  498 110.2 2.1e-24
NP_001019399 (OMIM: 103180) ADP-ribosylation facto ( 181)  498 110.2 2.1e-24
NP_001019397 (OMIM: 103180) ADP-ribosylation facto ( 181)  498 110.2 2.1e-24
NP_079323 (OMIM: 614439) ADP-ribosylation factor-l ( 192)  495 109.6 3.4e-24
NP_848930 (OMIM: 608909) ADP-ribosylation factor-l ( 179)  453 101.1 1.2e-21
XP_005248554 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 398)  442 99.2 9.2e-21
NP_001647 (OMIM: 601747) E3 ubiquitin-protein liga ( 574)  442 99.4 1.2e-20
NP_001168 (OMIM: 603425) ADP-ribosylation factor-l ( 181)  427 95.8 4.5e-20
NP_036229 (OMIM: 608960) ADP-ribosylation factor-l ( 179)  426 95.6 5.1e-20
XP_005266310 (OMIM: 609351) PREDICTED: ADP-ribosyl ( 196)  413 93.0 3.3e-19
NP_612459 (OMIM: 609351) ADP-ribosylation factor-l ( 196)  413 93.0 3.3e-19
XP_016864933 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 569)  410 92.9   1e-18
NP_150230 (OMIM: 601747) E3 ubiquitin-protein liga ( 569)  410 92.9   1e-18
XP_016871749 (OMIM: 604695) PREDICTED: ADP-ribosyl ( 182)  401 90.5 1.7e-18
NP_004302 (OMIM: 604695) ADP-ribosylation factor-l ( 182)  401 90.5 1.7e-18
XP_006719454 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 137)  386 87.4 1.2e-17
XP_016862800 (OMIM: 209900,268000,600151,608845,61 ( 186)  387 87.7 1.2e-17
NP_115522 (OMIM: 209900,268000,600151,608845,61357 ( 186)  387 87.7 1.2e-17
NP_816931 (OMIM: 209900,268000,600151,608845,61357 ( 186)  387 87.7 1.2e-17
NP_001265222 (OMIM: 209900,268000,600151,608845,61 ( 186)  387 87.7 1.2e-17
NP_150231 (OMIM: 601747) E3 ubiquitin-protein liga ( 546)  388 88.5 2.2e-17
NP_001310442 (OMIM: 209900,268000,600151,608845,61 ( 193)  380 86.3 3.4e-17
XP_016856722 (OMIM: 103180) PREDICTED: ADP-ribosyl ( 212)  380 86.4 3.6e-17
XP_005252458 (OMIM: 608909) PREDICTED: ADP-ribosyl ( 142)  369 84.0 1.3e-16
NP_001658 (OMIM: 601175) ADP-ribosylation factor-l ( 184)  364 83.1 3.1e-16
NP_001254476 (OMIM: 604699) ADP-ribosylation facto ( 201)  348 79.9 3.1e-15
XP_016883065 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201)  348 79.9 3.1e-15
XP_011526784 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201)  348 79.9 3.1e-15
XP_011526785 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201)  348 79.9 3.1e-15
NP_001254477 (OMIM: 604699) ADP-ribosylation facto ( 201)  348 79.9 3.1e-15
NP_003215 (OMIM: 604699) ADP-ribosylation factor-r ( 201)  348 79.9 3.1e-15
NP_001032251 (OMIM: 608960) ADP-ribosylation facto ( 142)  339 77.9 8.7e-15
NP_817114 (OMIM: 608960) ADP-ribosylation factor-l ( 142)  339 77.9 8.7e-15
NP_620150 (OMIM: 616597) ADP-ribosylation factor-l ( 186)  331 76.4 3.2e-14
NP_001310443 (OMIM: 209900,268000,600151,608845,61 ( 159)  328 75.7 4.4e-14
XP_016862801 (OMIM: 209900,268000,600151,608845,61 ( 159)  328 75.7 4.4e-14


>>NP_997625 (OMIM: 604786) ADP-ribosylation factor-like   (200 aa)
 initn: 1305 init1: 1305 opt: 1305  Z-score: 1440.7  bits: 273.4 E(85289): 1.6e-73
Smith-Waterman score: 1305; 100.0% identity (100.0% similar) in 200 aa overlap (1-200:1-200)

               10        20        30        40        50        60
pF1KB8 MGNGLSDQTSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 MGNGLSDQTSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 VTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 VTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 ISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_997 ISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLE
              130       140       150       160       170       180

              190       200
pF1KB8 KLHDMIIKRRKMLRQQKKKR
       ::::::::::::::::::::
NP_997 KLHDMIIKRRKMLRQQKKKR
              190       200

>>NP_005729 (OMIM: 604786) ADP-ribosylation factor-like   (200 aa)
 initn: 1305 init1: 1305 opt: 1305  Z-score: 1440.7  bits: 273.4 E(85289): 1.6e-73
Smith-Waterman score: 1305; 100.0% identity (100.0% similar) in 200 aa overlap (1-200:1-200)

               10        20        30        40        50        60
pF1KB8 MGNGLSDQTSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MGNGLSDQTSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 VTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 ISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLE
              130       140       150       160       170       180

              190       200
pF1KB8 KLHDMIIKRRKMLRQQKKKR
       ::::::::::::::::::::
NP_005 KLHDMIIKRRKMLRQQKKKR
              190       200

>>NP_001032241 (OMIM: 604786) ADP-ribosylation factor-li  (200 aa)
 initn: 1305 init1: 1305 opt: 1305  Z-score: 1440.7  bits: 273.4 E(85289): 1.6e-73
Smith-Waterman score: 1305; 100.0% identity (100.0% similar) in 200 aa overlap (1-200:1-200)

               10        20        30        40        50        60
pF1KB8 MGNGLSDQTSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNGLSDQTSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 VTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 ISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLE
              130       140       150       160       170       180

              190       200
pF1KB8 KLHDMIIKRRKMLRQQKKKR
       ::::::::::::::::::::
NP_001 KLHDMIIKRRKMLRQQKKKR
              190       200

>>NP_001182325 (OMIM: 604786) ADP-ribosylation factor-li  (200 aa)
 initn: 1305 init1: 1305 opt: 1305  Z-score: 1440.7  bits: 273.4 E(85289): 1.6e-73
Smith-Waterman score: 1305; 100.0% identity (100.0% similar) in 200 aa overlap (1-200:1-200)

               10        20        30        40        50        60
pF1KB8 MGNGLSDQTSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNGLSDQTSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 VTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 ISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLE
              130       140       150       160       170       180

              190       200
pF1KB8 KLHDMIIKRRKMLRQQKKKR
       ::::::::::::::::::::
NP_001 KLHDMIIKRRKMLRQQKKKR
              190       200

>>NP_005728 (OMIM: 604787) ADP-ribosylation factor-like   (192 aa)
 initn: 918 init1: 918 opt: 921  Z-score: 1021.1  bits: 195.8 E(85289): 3.9e-50
Smith-Waterman score: 921; 69.5% identity (91.6% similar) in 190 aa overlap (10-199:3-192)

               10        20        30        40        50        60
pF1KB8 MGNGLSDQTSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIK
                .: ::. .:::.:::.:::: ::::::::::.:::::::::: ::::::::
NP_005        MGNISSNISAFQSLHIVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIK
                      10        20        30        40        50   

               70        80        90       100       110       120
pF1KB8 VTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITR
       .. :..: .. ::::::::::::::::::.::::::..:::::::.:.:::::::::.:.
NP_005 LSNGTAKGISCHFWDVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTK
            60        70        80        90       100       110   

              130       140       150       160       170       180
pF1KB8 ISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLE
       ..::::.:.:..:::::: .:: ..:::: ::. ::  .: .:.::.:::::.:: ::..
NP_005 FAENQGTPLLVIANKQDLPKSLPVAEIEKQLALHELIPATTYHVQPACAIIGEGLTEGMD
           120       130       140       150       160       170   

              190       200
pF1KB8 KLHDMIIKRRKMLRQQKKKR
       ::..::.:::: :.:.::. 
NP_005 KLYEMILKRRKSLKQKKKR 
           180       190   

>>NP_001269360 (OMIM: 604787) ADP-ribosylation factor-li  (201 aa)
 initn: 918 init1: 918 opt: 921  Z-score: 1020.9  bits: 195.8 E(85289): 4e-50
Smith-Waterman score: 921; 69.5% identity (91.6% similar) in 190 aa overlap (10-199:3-192)

               10        20        30        40        50        60
pF1KB8 MGNGLSDQTSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIK
                .: ::. .:::.:::.:::: ::::::::::.:::::::::: ::::::::
NP_001        MGNISSNISAFQSLHIVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIK
                      10        20        30        40        50   

               70        80        90       100       110       120
pF1KB8 VTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITR
       .. :..: .. ::::::::::::::::::.::::::..:::::::.:.:::::::::.:.
NP_001 LSNGTAKGISCHFWDVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTK
            60        70        80        90       100       110   

              130       140       150       160       170       180
pF1KB8 ISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLE
       ..::::.:.:..:::::: .:: ..:::: ::. ::  .: .:.::.:::::.:: ::..
NP_001 FAENQGTPLLVIANKQDLPKSLPVAEIEKQLALHELIPATTYHVQPACAIIGEGLTEGMD
           120       130       140       150       160       170   

              190       200        
pF1KB8 KLHDMIIKRRKMLRQQKKKR        
       ::..::.:::: :.:.::.         
NP_001 KLYEMILKRRKSLKQKKKRTGDLRSCEV
           180       190       200 

>>NP_001652 (OMIM: 600732) ADP-ribosylation factor-like   (201 aa)
 initn: 818 init1: 800 opt: 819  Z-score: 909.4  bits: 175.1 E(85289): 6.5e-44
Smith-Waterman score: 819; 60.2% identity (86.1% similar) in 201 aa overlap (1-200:1-201)

               10         20        30        40        50         
pF1KB8 MGNGLSDQTSILSN-LPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKI
       ::: :....   :. :: ::..:.:..::: ::::..::::.:.:::..:::::::::::
NP_001 MGNHLTEMAPTASSFLPHFQALHVVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKI
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB8 KVTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKIT
       .: ::.:. .::. :::::::::::::.:::: :::.:::::....::.::::.:::.:.
NP_001 RVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRIS
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 RISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGL
       : :.:::::::..:::::  ..:: .:.:: ::. ::...:  :.:   :. : ::..::
NP_001 RASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVRELAAATLTHVQGCSAVDGLGLQQGL
              130       140       150       160       170       180

     180       190       200
pF1KB8 EKLHDMIIKRRKMLRQQKKKR
       :.:..::.::.:  :  ::.:
NP_001 ERLYEMILKRKKAARGGKKRR
              190       200 

>>XP_011523084 (OMIM: 600732) PREDICTED: ADP-ribosylatio  (201 aa)
 initn: 818 init1: 800 opt: 819  Z-score: 909.4  bits: 175.1 E(85289): 6.5e-44
Smith-Waterman score: 819; 60.2% identity (86.1% similar) in 201 aa overlap (1-200:1-201)

               10         20        30        40        50         
pF1KB8 MGNGLSDQTSILSN-LPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKI
       ::: :....   :. :: ::..:.:..::: ::::..::::.:.:::..:::::::::::
XP_011 MGNHLTEMAPTASSFLPHFQALHVVVIGLDSAGKTSLLYRLKFKEFVQSVPTKGFNTEKI
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB8 KVTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKIT
       .: ::.:. .::. :::::::::::::.:::: :::.:::::....::.::::.:::.:.
XP_011 RVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRIS
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB8 RISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGL
       : :.:::::::..:::::  ..:: .:.:: ::. ::...:  :.:   :. : ::..::
XP_011 RASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVRELAAATLTHVQGCSAVDGLGLQQGL
              130       140       150       160       170       180

     180       190       200
pF1KB8 EKLHDMIIKRRKMLRQQKKKR
       :.:..::.::.:  :  ::.:
XP_011 ERLYEMILKRKKAARGGKKRR
              190       200 

>>NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 [Ho  (180 aa)
 initn: 475 init1: 266 opt: 515  Z-score: 577.7  bits: 113.6 E(85289): 1.9e-25
Smith-Waterman score: 515; 44.2% identity (74.6% similar) in 181 aa overlap (9-189:6-180)

               10        20        30        40        50        60
pF1KB8 MGNGLSDQTSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIK
               .:..: : . ....:...::: :::::.::.:...:.:.:.:: :::.: ..
NP_001    MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
                  10        20        30        40        50       

               70        80        90       100       110       120
pF1KB8 VTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITR
             :.. :  ::::::...::::: : . :.:..::::: : ::..:.  ::.:.  
NP_001 Y-----KNICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLL
             60        70        80        90       100       110  

              130       140       150       160       170       180
pF1KB8 ISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLE
       ..: . . .:. :::::: :....::.   :..  : . : :..: :::  : :: :::.
NP_001 VDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRT-WYVQATCATQGTGLYEGLD
            120       130       140       150        160       170 

              190       200
pF1KB8 KLHDMIIKRRKMLRQQKKKR
        : . . ::           
NP_001 WLSNELSKR           
             180           

>>XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosylatio  (181 aa)
 initn: 462 init1: 274 opt: 505  Z-score: 566.7  bits: 111.6 E(85289): 7.9e-25
Smith-Waterman score: 505; 42.1% identity (73.7% similar) in 190 aa overlap (1-190:1-181)

               10        20        30        40        50        60
pF1KB8 MGNGLSDQTSILSNLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIK
       ::: ...   .:..: . . ..:...::: :::::.::.:...:.:.:.:: :::.: ..
XP_005 MGNIFGN---LLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
                  10        20        30        40        50       

               70        80        90       100       110       120
pF1KB8 VTLGNSKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITR
             :...:  ::::::.:.::::. : . :.:..::::: : ::..::. :: ..  
XP_005 Y-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLA
             60        70        80        90       100       110  

              130       140       150       160       170       180
pF1KB8 ISENQGVPVLIVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLE
        .: . . .:. :::::: :... .::   :..  :   . :..: :::  :::: :::.
XP_005 EDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRN-WYIQATCATSGDGLYEGLD
            120       130       140       150        160       170 

              190       200
pF1KB8 KLHDMIIKRRKMLRQQKKKR
        : ... ...          
XP_005 WLANQLKNKK          
             180           




200 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 15:18:42 2016 done: Fri Nov  4 15:18:43 2016
 Total Scan time:  4.110 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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