Result of FASTA (omim) for pF1KB8755
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8755, 199 aa
  1>>>pF1KB8755 199 - 199 aa - 199 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5022+/-0.00042; mu= 13.2936+/- 0.026
 mean_var=96.7545+/-18.584, 0's: 0 Z-trim(114.3): 411  B-trim: 60 in 2/54
 Lambda= 0.130388
 statistics sampled from 23564 (24014) to 23564 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.282), width:  16
 Scan time:  5.290

The best scores are:                                      opt bits E(85289)
NP_060064 (OMIM: 607863) GTP-binding protein Di-Ra ( 199) 1290 252.6   3e-67
NP_660156 (OMIM: 607862) GTP-binding protein Di-Ra ( 198) 1065 210.3 1.7e-54
XP_011526015 (OMIM: 607862) PREDICTED: GTP-binding ( 232) 1065 210.4 1.9e-54
XP_016858262 (OMIM: 605193) PREDICTED: GTP-binding ( 229)  614 125.5 6.4e-29
NP_004666 (OMIM: 605193) GTP-binding protein Di-Ra ( 229)  614 125.5 6.4e-29
NP_066361 (OMIM: 179540) ras-related protein Rap-2 ( 183)  529 109.4 3.5e-24
NP_002875 (OMIM: 179520) ras-related protein Rap-1 ( 184)  523 108.3 7.8e-24
XP_016857451 (OMIM: 179520) PREDICTED: ras-related ( 184)  523 108.3 7.8e-24
NP_001010935 (OMIM: 179520) ras-related protein Ra ( 184)  523 108.3 7.8e-24
NP_001278825 (OMIM: 179520) ras-related protein Ra ( 184)  523 108.3 7.8e-24
XP_016857453 (OMIM: 179520) PREDICTED: ras-related ( 184)  523 108.3 7.8e-24
XP_016857452 (OMIM: 179520) PREDICTED: ras-related ( 184)  523 108.3 7.8e-24
NP_001010942 (OMIM: 179530) ras-related protein Ra ( 184)  519 107.6 1.3e-23
NP_056461 (OMIM: 179530) ras-related protein Rap-1 ( 184)  519 107.6 1.3e-23
NP_002877 (OMIM: 179541) ras-related protein Rap-2 ( 183)  515 106.8 2.2e-23
XP_016857450 (OMIM: 179520) PREDICTED: ras-related ( 195)  491 102.3 5.3e-22
XP_016857449 (OMIM: 179520) PREDICTED: ras-related ( 195)  491 102.3 5.3e-22
NP_004976 (OMIM: 109800,114480,137215,163200,19007 ( 188)  484 101.0 1.3e-21
XP_011518955 (OMIM: 109800,114480,137215,163200,19 ( 188)  484 101.0 1.3e-21
NP_203524 (OMIM: 109800,114480,137215,163200,19007 ( 189)  452 95.0 8.3e-20
XP_006719132 (OMIM: 109800,114480,137215,163200,19 ( 189)  452 95.0 8.3e-20
XP_016874782 (OMIM: 109800,114480,137215,163200,19 ( 227)  452 95.0 9.5e-20
NP_036382 (OMIM: 600098) ras-related protein R-Ras ( 204)  430 90.9 1.5e-18
NP_006261 (OMIM: 165090) ras-related protein R-Ras ( 218)  429 90.7 1.9e-18
NP_002921 (OMIM: 609592) GTP-binding protein Rit2  ( 217)  417 88.4 8.8e-18
NP_001123914 (OMIM: 109800,137550,162900,163200,18 ( 189)  415 88.0   1e-17
NP_005334 (OMIM: 109800,137550,162900,163200,18847 ( 189)  415 88.0   1e-17
NP_002515 (OMIM: 114500,137550,162900,163200,16479 ( 189)  414 87.8 1.2e-17
XP_005263784 (OMIM: 179551) PREDICTED: ras-related ( 206)  407 86.5 3.1e-17
XP_005263786 (OMIM: 179551) PREDICTED: ras-related ( 206)  407 86.5 3.1e-17
XP_016860111 (OMIM: 179551) PREDICTED: ras-related ( 206)  407 86.5 3.1e-17
XP_005263785 (OMIM: 179551) PREDICTED: ras-related ( 206)  407 86.5 3.1e-17
NP_002872 (OMIM: 179551) ras-related protein Ral-B ( 206)  407 86.5 3.1e-17
XP_005263781 (OMIM: 179551) PREDICTED: ras-related ( 228)  407 86.6 3.4e-17
XP_016860110 (OMIM: 179551) PREDICTED: ras-related ( 228)  407 86.6 3.4e-17
XP_011509875 (OMIM: 179551) PREDICTED: ras-related ( 229)  407 86.6 3.4e-17
NP_005605 (OMIM: 601293) GTP-binding protein Rheb  ( 184)  404 85.9 4.3e-17
NP_789765 (OMIM: 109800,137550,162900,163200,18847 ( 170)  398 84.8 8.8e-17
NP_008843 (OMIM: 609591,615355) GTP-binding protei ( 219)  398 84.9 1.1e-16
NP_001243750 (OMIM: 609591,615355) GTP-binding pro ( 236)  398 84.9 1.1e-16
NP_005393 (OMIM: 179550) ras-related protein Ral-A ( 206)  390 83.3 2.9e-16
XP_011513768 (OMIM: 179550) PREDICTED: ras-related ( 206)  390 83.3 2.9e-16
XP_006715825 (OMIM: 179550) PREDICTED: ras-related ( 206)  390 83.3 2.9e-16
NP_116307 (OMIM: 612664) ras-related and estrogen- ( 199)  389 83.1 3.2e-16
XP_016884191 (OMIM: 612842) PREDICTED: GTP-binding ( 266)  380 81.6 1.3e-15
XP_005261499 (OMIM: 612842) PREDICTED: GTP-binding ( 266)  380 81.6 1.3e-15
XP_011528342 (OMIM: 612842) PREDICTED: GTP-binding ( 266)  380 81.6 1.3e-15
NP_055125 (OMIM: 612842) GTP-binding protein Rhes  ( 266)  380 81.6 1.3e-15
XP_016884190 (OMIM: 612842) PREDICTED: GTP-binding ( 278)  380 81.6 1.3e-15
XP_011514759 (OMIM: 601293) PREDICTED: GTP-binding ( 173)  368 79.1 4.5e-15


>>NP_060064 (OMIM: 607863) GTP-binding protein Di-Ras2 [  (199 aa)
 initn: 1290 init1: 1290 opt: 1290  Z-score: 1328.2  bits: 252.6 E(85289): 3e-67
Smith-Waterman score: 1290; 100.0% identity (100.0% similar) in 199 aa overlap (1-199:1-199)

               10        20        30        40        50        60
pF1KB8 MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 NKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 NKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDG
              130       140       150       160       170       180

              190         
pF1KB8 KKSKQQKRKEKLKGKCVIM
       :::::::::::::::::::
NP_060 KKSKQQKRKEKLKGKCVIM
              190         

>>NP_660156 (OMIM: 607862) GTP-binding protein Di-Ras1 [  (198 aa)
 initn: 1063 init1: 744 opt: 1065  Z-score: 1099.5  bits: 210.3 E(85289): 1.7e-54
Smith-Waterman score: 1065; 78.9% identity (95.5% similar) in 199 aa overlap (1-199:1-198)

               10        20        30        40        50        60
pF1KB8 MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT
       ::::::::::.::::::::::::::::::::::..::::.:::::::::::::.::::::
NP_660 MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQIT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG
       :::::::::::::::::::::::::.:.::.:::::: :::. : .:::.::.::.::::
NP_660 DTTGSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 NKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDG
       :::::. .:::.. ::.:.:. :::::::::::.:.::::::::::.:: ::..::.:::
NP_660 NKCDET-QREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDG
               130       140       150       160       170         

              190         
pF1KB8 KKSKQQKRKEKLKGKCVIM
       :.: .::: ...::::..:
NP_660 KRSGKQKRTDRVKGKCTLM
     180       190        

>>XP_011526015 (OMIM: 607862) PREDICTED: GTP-binding pro  (232 aa)
 initn: 1063 init1: 744 opt: 1065  Z-score: 1098.6  bits: 210.4 E(85289): 1.9e-54
Smith-Waterman score: 1065; 78.9% identity (95.5% similar) in 199 aa overlap (1-199:35-232)

                                             10        20        30
pF1KB8                               MPEQSNDYRVAVFGAGGVGKSSLVLRFVKG
                                     ::::::::::.:::::::::::::::::::
XP_011 QGLRARQARSGVLAAGTSPPGPGRPPAAGKMPEQSNDYRVVVFGAGGVGKSSLVLRFVKG
           10        20        30        40        50        60    

               40        50        60        70        80        90
pF1KB8 TFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITS
       :::..::::.:::::::::::::.:::::::::::::::::::::::::::::::.:.::
XP_011 TFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTS
           70        80        90       100       110       120    

              100       110       120       130       140       150
pF1KB8 RQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMET
       .:::::: :::. : .:::.::.::.:::::::::. .:::.. ::.:.:. ::::::::
XP_011 KQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDET-QREVDTREAQAVAQEWKCAFMET
          130       140       150       160        170       180   

              160       170       180       190         
pF1KB8 SAKLNHNVKELFQELLNLEKRRTVSLQIDGKKSKQQKRKEKLKGKCVIM
       :::.:.::::::::::.:: ::..::.::::.: .::: ...::::..:
XP_011 SAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTDRVKGKCTLM
           190       200       210       220       230  

>>XP_016858262 (OMIM: 605193) PREDICTED: GTP-binding pro  (229 aa)
 initn: 560 init1: 560 opt: 614  Z-score: 640.2  bits: 125.5 E(85289): 6.4e-29
Smith-Waterman score: 614; 49.0% identity (80.4% similar) in 194 aa overlap (7-199:37-229)

                                       10        20        30      
pF1KB8                         MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESY
                                     ::::.: :..:::::.:. ....:.::. :
XP_016 GSKEQKLLKRLRLLPALLILRAFKPHRKIRDYRVVVVGTAGVGKSTLLHKWASGNFRHEY
         10        20        30        40        50        60      

         40        50        60        70        80        90      
pF1KB8 IPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEE
       .::.:.:: :...:.... .:.:::. ..    :.::  :..::::.::::.:....:::
XP_016 LPTIENTYCQLLGCSHGVLSLHITDSKSGDGNRALQRHVIARGHAFVLVYSVTKKETLEE
         70        80        90       100       110       120      

        100       110        120       130       140       150     
pF1KB8 LKPIYEQICEIKGD-VESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETSAKLN
       :: .:: ::.:::. ....::.::::: :..  :::  ... . :  :.::::: ::: .
XP_016 LKAFYELICKIKGNNLHKFPIVLVGNKSDDT-HREVALNDGATCAMEWNCAFMEISAKTD
        130       140       150        160       170       180     

         160       170       180       190         
pF1KB8 HNVKELFQELLNLEKRRTVSLQIDGKKSKQQKRKEKLKGKCVIM
        ::.:::. ::: .:. :..::   :::.. .  :::  ::.::
XP_016 VNVQELFHMLLNYKKKPTTGLQEPEKKSQMPNTTEKLLDKCIIM
         190       200       210       220         

>>NP_004666 (OMIM: 605193) GTP-binding protein Di-Ras3 p  (229 aa)
 initn: 560 init1: 560 opt: 614  Z-score: 640.2  bits: 125.5 E(85289): 6.4e-29
Smith-Waterman score: 614; 49.0% identity (80.4% similar) in 194 aa overlap (7-199:37-229)

                                       10        20        30      
pF1KB8                         MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESY
                                     ::::.: :..:::::.:. ....:.::. :
NP_004 GSKEQKLLKRLRLLPALLILRAFKPHRKIRDYRVVVVGTAGVGKSTLLHKWASGNFRHEY
         10        20        30        40        50        60      

         40        50        60        70        80        90      
pF1KB8 IPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEE
       .::.:.:: :...:.... .:.:::. ..    :.::  :..::::.::::.:....:::
NP_004 LPTIENTYCQLLGCSHGVLSLHITDSKSGDGNRALQRHVIARGHAFVLVYSVTKKETLEE
         70        80        90       100       110       120      

        100       110        120       130       140       150     
pF1KB8 LKPIYEQICEIKGD-VESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETSAKLN
       :: .:: ::.:::. ....::.::::: :..  :::  ... . :  :.::::: ::: .
NP_004 LKAFYELICKIKGNNLHKFPIVLVGNKSDDT-HREVALNDGATCAMEWNCAFMEISAKTD
        130       140       150        160       170       180     

         160       170       180       190         
pF1KB8 HNVKELFQELLNLEKRRTVSLQIDGKKSKQQKRKEKLKGKCVIM
        ::.:::. ::: .:. :..::   :::.. .  :::  ::.::
NP_004 VNVQELFHMLLNYKKKPTTGLQEPEKKSQMPNTTEKLLDKCIIM
         190       200       210       220         

>>NP_066361 (OMIM: 179540) ras-related protein Rap-2a pr  (183 aa)
 initn: 504 init1: 347 opt: 529  Z-score: 555.0  bits: 109.4 E(85289): 3.5e-24
Smith-Waterman score: 529; 51.2% identity (80.6% similar) in 160 aa overlap (7-166:3-161)

               10        20        30        40        50        60
pF1KB8 MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT
             .:.:.:.:.::::::.:...:: ::: :.: ::.:: ::. :  :.:  .:.: 
NP_066     MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEIL
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KB8 DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG
       ::.:..:: .:. : :..:..::::::....::....::. .:: ..:   :..:..:::
NP_066 DTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVK-RYEKVPVILVG
         60        70        80        90       100        110     

              130       140       150       160       170       180
pF1KB8 NKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDG
       :: :    :::.:::..:::. : : ::::::: .  : ::: :..              
NP_066 NKVDLESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQMNYAAQPDKDDP
         120       130       140       150       160       170     

              190         
pF1KB8 KKSKQQKRKEKLKGKCVIM
                          
NP_066 CCSACNIQ           
         180              

>>NP_002875 (OMIM: 179520) ras-related protein Rap-1A pr  (184 aa)
 initn: 382 init1: 382 opt: 523  Z-score: 548.9  bits: 108.3 E(85289): 7.8e-24
Smith-Waterman score: 523; 44.2% identity (77.9% similar) in 181 aa overlap (7-186:3-179)

               10        20        30        40        50        60
pF1KB8 MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT
             .:...:.:.::::::.:...::.: : :.: ::.::.::. .  : . : :.: 
NP_002     MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEIL
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KB8 DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG
       ::.:..:: ::. : ...:..: ::::::.......:. . ::: ..: :.:..:..:::
NP_002 DTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVK-DTEDVPMILVG
         60        70        80        90       100        110     

              130       140        150       160       170         
pF1KB8 NKCDESPSREVQSSEAEALARTW-KCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQID
       ::::    : : . ... ::: : .:::.:.::: . ::.:.: .:.   .:.:    ..
NP_002 NKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKT---PVE
         120       130       140       150       160          170  

     180       190         
pF1KB8 GKKSKQQKRKEKLKGKCVIM
        :: :..             
NP_002 KKKPKKKSCLLL        
            180            

>>XP_016857451 (OMIM: 179520) PREDICTED: ras-related pro  (184 aa)
 initn: 382 init1: 382 opt: 523  Z-score: 548.9  bits: 108.3 E(85289): 7.8e-24
Smith-Waterman score: 523; 44.2% identity (77.9% similar) in 181 aa overlap (7-186:3-179)

               10        20        30        40        50        60
pF1KB8 MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT
             .:...:.:.::::::.:...::.: : :.: ::.::.::. .  : . : :.: 
XP_016     MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEIL
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KB8 DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG
       ::.:..:: ::. : ...:..: ::::::.......:. . ::: ..: :.:..:..:::
XP_016 DTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVK-DTEDVPMILVG
         60        70        80        90       100        110     

              130       140        150       160       170         
pF1KB8 NKCDESPSREVQSSEAEALARTW-KCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQID
       ::::    : : . ... ::: : .:::.:.::: . ::.:.: .:.   .:.:    ..
XP_016 NKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKT---PVE
         120       130       140       150       160          170  

     180       190         
pF1KB8 GKKSKQQKRKEKLKGKCVIM
        :: :..             
XP_016 KKKPKKKSCLLL        
            180            

>>NP_001010935 (OMIM: 179520) ras-related protein Rap-1A  (184 aa)
 initn: 382 init1: 382 opt: 523  Z-score: 548.9  bits: 108.3 E(85289): 7.8e-24
Smith-Waterman score: 523; 44.2% identity (77.9% similar) in 181 aa overlap (7-186:3-179)

               10        20        30        40        50        60
pF1KB8 MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT
             .:...:.:.::::::.:...::.: : :.: ::.::.::. .  : . : :.: 
NP_001     MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEIL
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KB8 DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG
       ::.:..:: ::. : ...:..: ::::::.......:. . ::: ..: :.:..:..:::
NP_001 DTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVK-DTEDVPMILVG
         60        70        80        90       100        110     

              130       140        150       160       170         
pF1KB8 NKCDESPSREVQSSEAEALARTW-KCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQID
       ::::    : : . ... ::: : .:::.:.::: . ::.:.: .:.   .:.:    ..
NP_001 NKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKT---PVE
         120       130       140       150       160          170  

     180       190         
pF1KB8 GKKSKQQKRKEKLKGKCVIM
        :: :..             
NP_001 KKKPKKKSCLLL        
            180            

>>NP_001278825 (OMIM: 179520) ras-related protein Rap-1A  (184 aa)
 initn: 382 init1: 382 opt: 523  Z-score: 548.9  bits: 108.3 E(85289): 7.8e-24
Smith-Waterman score: 523; 44.2% identity (77.9% similar) in 181 aa overlap (7-186:3-179)

               10        20        30        40        50        60
pF1KB8 MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT
             .:...:.:.::::::.:...::.: : :.: ::.::.::. .  : . : :.: 
NP_001     MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEIL
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KB8 DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG
       ::.:..:: ::. : ...:..: ::::::.......:. . ::: ..: :.:..:..:::
NP_001 DTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVK-DTEDVPMILVG
         60        70        80        90       100        110     

              130       140        150       160       170         
pF1KB8 NKCDESPSREVQSSEAEALARTW-KCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQID
       ::::    : : . ... ::: : .:::.:.::: . ::.:.: .:.   .:.:    ..
NP_001 NKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKT---PVE
         120       130       140       150       160          170  

     180       190         
pF1KB8 GKKSKQQKRKEKLKGKCVIM
        :: :..             
NP_001 KKKPKKKSCLLL        
            180            




199 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 15:18:03 2016 done: Fri Nov  4 15:18:04 2016
 Total Scan time:  5.290 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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