GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:44:14

Sequence gi568815597r:70162720_70454408 : 291689 bp : 38.30% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -   1229   1224    6                               1.05
 1.07 Term -   9520   9353  168  1  0   45   33   130 0.297   0.10
 1.06 Intr -  10990  10903   88  0  1   49   84    24 0.387  -2.85
 1.05 Intr -  13263  13091  173  0  2   58   97   138 0.748   9.52
 1.04 Intr -  22195  22066  130  0  1   32   83    60 0.156  -0.32
 1.03 Intr -  24619  24546   74  1  2   46   98    72 0.151   1.29
 1.02 Intr -  26554  26373  182  2  2  -12   95   105 0.029  -0.13
 1.01 Init -  42821  42671  151  2  1   67  116   125 0.286  13.67
 1.00 Prom -  43628  43589   40                              -4.45

 2.00 Prom +  56229  56268   40                              -3.05
 2.01 Init +  58918  59120  203  0  2   89   64   179 0.982  14.01
 2.02 Intr +  65703  65836  134  0  2   88   76    93 0.927   7.47
 2.03 Intr +  69549  69658  110  1  2   42   79    87 0.852   2.28
 2.04 Intr +  71977  72069   93  0  0   49   74    74 0.713   1.34
 2.05 Intr +  72782  72831   50  1  2   76   82    77 0.959   2.46
 2.06 Intr +  74706  74833  128  0  2   86   97   221 0.999  22.20
 2.07 Intr +  81965  82096  132  0  0   31   75   201 0.656  12.80
 2.08 Intr +  84101  84188   88  0  1   -2  110   104 0.992   1.71
 2.09 Intr +  87646  87784  139  1  1   66   53   212 0.999  15.05
 2.10 Term +  87892  88086  195  0  0   33   42   290 0.933  15.33
 2.11 PlyA +  88736  88741    6                               1.05

 3.10 PlyA -  88839  88834    6                               1.05
 3.09 Term - 100128  99998  131  1  2   75   36   198 0.960  10.66
 3.08 Intr - 108237 108137  101  2  2   93   82    37 0.980   2.43
 3.07 Intr - 112099 112001   99  0  0   92   81    21 0.502   0.11
 3.06 Intr - 114125 114046   80  2  2  109  106    90 0.997  10.33
 3.05 Intr - 129830 129669  162  2  0   76   60   189 0.792  14.15
 3.04 Intr - 152841 152762   80  1  2   25   99   116 0.455   4.75
 3.03 Intr - 162238 162134  105  2  0   82   54    63 0.421   1.57
 3.02 Intr - 173380 173339   42  2  0  108   96    20 0.483   2.09
 3.01 Init - 191689 191260  430  1  1   94   89   539 0.933  51.06
 3.00 Prom - 201132 201093   40                              -5.95

 4.00 Prom + 205204 205243   40                              -2.05
 4.01 Init + 205333 205488  156  0  0   77   94    30 0.603   2.46
 4.02 Intr + 206305 206508  204  0  0  117   96    49 0.566   7.07
 4.03 Intr + 207011 207221  211  1  1   35  110   205 0.797  14.96
 4.04 Term + 207677 208137  461  0  2   85   48   131 0.636   3.07
 4.05 PlyA + 208948 208953    6                               1.05

 5.00 Prom + 210344 210383   40                              -4.05
 5.01 Init + 235241 235300   60  1  0   51   86    57 0.045   3.10
 5.02 Intr + 247961 248144  184  1  1   48   78   131 0.056   6.54
 5.03 Intr + 248760 248937  178  1  1   63  103    48 0.072   1.86
 5.04 Intr + 251431 251449   19  1  1   82   95    23 0.139  -1.90
 5.05 Intr + 253237 253318   82  0  1   77   93    44 0.446   2.09
 5.06 Intr + 255218 255313   96  0  0   85   92    37 0.765   2.86
 5.07 Intr + 258847 258956  110  2  2  109   88    64 0.945   7.58
 5.08 Intr + 261566 261697  132  1  0   22   99    74 0.689   1.82
 5.09 Intr + 267075 267132   58  2  1   51   95    25 0.852  -2.96
 5.10 Intr + 267598 267675   78  2  0   96   93    53 0.964   5.20
 5.11 Intr + 269364 269516  153  1  0   78   84   148 0.852  12.52
 5.12 Intr + 271109 271230  122  0  2   69   92    58 0.952   3.59
 5.13 Intr + 272406 272458   53  2  2   53   94    74 0.887   1.29
 5.14 Intr + 273029 273214  186  2  0   32   44   138 0.377   1.68
 5.15 Intr + 275969 276107  139  2  1   87   92   173 0.615  17.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 237316 237228   89  2  2   87   42   102 0.829   2.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:70162720_70454408|GENSCAN_predicted_peptide_1|321_aa
MSRLKRIAGQDLRAGFKAGGRDCGTSVPQGLLKAARKSGQLNLSGRNLSEVPQCVWRINV
DIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSL
PSAIRELENLQKLNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLE
LHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPY
SLGNLHLKFLALEGNPLRTIRREIISRTVIKAPADLVSGKDLFLIDGTFSMLSDGKRRLM
SPQDFFYKGTIPVHEGSALNI

>gi568815597r:70162720_70454408|GENSCAN_predicted_CDS_1|966_bp
atgtcgcgcctgaagcggatagcggggcaggatctccgcgctggtttcaaagcaggtgga
agagactgcggtacctcggtaccccaagggctgttgaaggcagcgaggaagagcggccag
ttaaacctgtcgggtagaaacctcagtgaagtgccgcagtgtgtctggagaataaatgtg
gatatccctgaggaagctaatcagaatctttcgtttggtgctactgaaagatggtgggag
cagacagatttgaccaaactaataatatcaaacaataaacttcagtcacttacagatgac
ctgcgactcttgcctgcactgactgttcttgatatacatgataatcagttgacatccctt
ccttctgctataagagagctagaaaatcttcagaaacttaatgtcagccataataaactg
aaaatactccctgaagaaattacaaacctaagaaacctgaagtgcctgtatctccagcat
aatgaattaacctgcatatcagagggatttgaacaactttccaatttagaagatttagaa
ttgcacgtaggtgaaaaccagattgaaatgttagaggcagaacatcttaaacatctgaat
tcaattcttgtgctagacctgagggataacaagttaaaatctgttccagatgaaattata
ctactacggtccttggaaaggcttgacctaagcaacaatgatattagtagtcttccctat
tcattggggaaccttcatttgaaatttttggcattagaaggaaatcctttgagaacaatt
cgaagagaaattataagtagaactgtgatcaaagcaccagcagatttggtgtctggtaag
gacctgtttctcatagatggcaccttctccatgctttcagatggcaagaggaggttaatg
agcccccaagacttcttttataagggcactattcccgttcatgagggttctgccctcaat
atctag

>gi568815597r:70162720_70454408|GENSCAN_predicted_peptide_2|423_aa
MSNTTVVPSTAGPGPSGGPGGGGGGGGGGGGTEVIQVTNVSPSASSEQMRTLFGFLGKID
ELRLFPPDDSPLPVSSRVCFVKFHDPDSAVVAQHLTNTVFVDRALIVVPYAEGVIPDEAK
ALSLLAPANAVAGLLPGGGLLPTPNPLTQIGAVPLAALGAPTLDPALAALGLPGANLNSQ
SLAADQLLKLMSTVDPKLNHVAAGLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPG
GQEADRDGGHILSLGVGDDPKAQGGEDLIPEKEVEGQGAHQKQDKKKEDKEKKRSKTPPK
SYSTARRSRSASRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKV
TRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMD
MSD

>gi568815597r:70162720_70454408|GENSCAN_predicted_CDS_2|1272_bp
atgagcaacactaccgtcgtccccagcactgcaggtccgggccccagcggcgggcccggt
ggcggaggtggtggtggcggcggaggcggcggcaccgaggtaatccaggtgactaatgtc
tccccgagcgctagctctgagcagatgcggactctcttcggtttcctaggcaagatcgac
gaactgcgcctcttcccgccggatgattcgcctttgccagtctcatctcgtgtctgcttt
gttaagttccatgatccagactcagcagttgtggcacagcatctgacaaacactgtattc
gttgacagagctttgatagtcgtaccatatgcagaaggagttattcctgatgaagctaaa
gctttgtctctgttggcaccagctaatgcagtggcaggtcttctgcctggtggtggactc
ctgcctactcctaacccacttacccagattggcgctgttccactggctgctttgggggct
cctactcttgatcctgcccttgctgcacttgggcttcctggagcaaacttgaactctcag
tctcttgctgcagatcagttgctgaagcttatgagtactgttgatcccaagttgaatcat
gtagctgctggtctcgtttcaccaagtctgaaatcggatacctctagtaaagaaatagag
gaagctatgaaaagagtacgagaagcacagtccctaatttctgctgctatagaaccaggc
ggtcaagaagcagatcgagacggcggtcacattctaagtctaggagtcggcgacgatcca
aaagcccaaggcggagaagatctcattccagagaaagaggtagaaggtcaaggagcacat
caaaaacaagacaaaaagaaagaagacaaagaaaagaaacgttctaaaacaccaccaaaa
agttacagcacagccagacgttctagaagtgcaagcagacataaaaaggagaagaagaaa
gataaagacaaagaaagaagtagggatgaaagagaacgatcaacaagcaagaagaagaag
agtaaagataaggaaaaggaccgggaaagaaaatcagagagtgataaagatgtaaaagtt
acacgggattatgatgaagaggaacaggggtatgacagtgagaaagagaaaaaagaagag
aagaaaccaatagaaacaggttcccctaaaacaaaggaatgttctgtggaaaagggaact
ggtgattcactaagagaatccaaagtgaatggggatgatcatcatgaagaagacatggat
atgagtgactga

>gi568815597r:70162720_70454408|GENSCAN_predicted_peptide_3|409_aa
MTGEKIRSLRRDHKPSKEEGDLLEPGDEEAAAALGGTFTRSRIGKGGKACHKIFSNHHHR
LQLKAAPASSNPPGAPALPLHNSSVTANSQSPALLAGTNPVAVVADGGSCPAHYPVHECV
FKGDVRRLSSLIRTHNIGQKDNHGNTPLHLAVMLGNKECAHLLLAHNAPVKVKNAQGWSP
LAEAISYGDRQMTLLRKLKQQSRESVEEKRPRLLKALKEERVGNFLADFYLVNGLVLESR
KRREHLSEEDILRNKAIMESLSKGGNIMEQNFEPIRRQSLTPPPQNTITWEEYISAENGK
APHLGRELVCKESKKTFKATIAMSQEFPLGIELLLNVLEVVAPFKHFNKLREFVQMKLPP
GFPVKLDIPVFPTITATVTFQEFRYDEFDGSIFTIPDDYKEDPSRFPDL

>gi568815597r:70162720_70454408|GENSCAN_predicted_CDS_3|1230_bp
atgaccggggagaagatccgctcactgcggagggaccacaagcccagcaaagaagaaggg
gacctgctggagcccggggatgaggaagcggcggctgccctcggcggtacctttaccaga
agcaggattggcaagggcggcaaagcttgtcataagatcttcagtaaccatcaccaccgg
ctacagctgaaggcagctccggcctcctccaatccccccggcgccccggctctgccgctg
cacaattcctccgtgactgccaactcccagtccccggcccttctggccggcaccaacccc
gttgctgtcgtcgcggatggaggcagttgccccgcacactacccggtgcacgagtgcgtc
ttcaagggggatgtgaggagactctcctctctcatccgcacgcacaatatcgggcagaaa
gataatcacggaaatactcctttacaccttgctgtgatgttaggaaataaagaatgtgcc
catttacttttggctcacaatgctccagtcaaggtgaaaaatgctcagggatggagccct
ctggcggaagccatcagctatggagataggcagatgactcttttgaggaagcttaagcag
caatccagggaaagtgttgaagaaaaacgacctcgattattaaaagccctgaaagaggaa
agagtaggaaactttttggcagacttttacctggtgaatggacttgttttagaatcaagg
aaaagaagagaacatctcagtgaagaggatattcttcgaaataaggccatcatggagagt
ttgagtaaaggtggaaacataatggaacagaattttgagccgattcgaagacagtctctt
acacctcctcctcagaacactattacatgggaagaatatatatctgctgaaaatggaaaa
gctcctcatctgggtagagaattggtgtgcaaagagagtaagaaaacgtttaaagctacg
atagccatgagccaggaatttcccttagggatagagttattattgaatgttttagaagta
gtagctcccttcaagcactttaacaagcttagagaatttgttcagatgaagcttcctcca
ggctttcctgtaaaattagatatacctgtgtttcccacaatcacagccactgtgactttt
caggagtttcgatacgatgaatttgatggctccatctttactatacctgatgactacaag
gaagacccaagccgttttcctgatctttaa

>gi568815597r:70162720_70454408|GENSCAN_predicted_peptide_4|343_aa
MHDIWCRDSDQGTSLGRSIRCPPALCSMRKIHLRPLVLRPTSPKNISPILNWTALPQVTP
RHAESGSDSSSASAPPPYNPSITSPPHTRSSLQFHSVTSPPPPAQQFPLKEVAGAKGIVK
PCPICVGPHWKLDCPTPLAATPRAPGTLAQGSLTDSFPDLLGLAAETDAAQSPRKPPGPS
QMLLVTLTVEAHFKRIKARYHSPVTAWPFKAYKLSLQFPHFTCPKTGQVLQVSSGSVPYQ
PNCFAYPPHGAKPIYSPILNTSLHNPSTTHNSVLDLKHAFFTIPLHPSSQPLFAFTWTDP
DTHQPQQLTWAVLPQGFTDSPHYFSRAQISSSSIHYLSWHNSS

>gi568815597r:70162720_70454408|GENSCAN_predicted_CDS_4|1032_bp
atgcatgacatttggtgccgtgactcagatcaggggacctcccttgggagatcaatccgc
tgtcctcctgctctttgctctatgagaaagatccacctacgacctctggtactcagacca
accagcccaaagaacatctcaccaattttaaattggactgctcttcctcaggtcactccc
cgccacgctgaatcaggctctgattcttcctcagcctctgctcccccaccctataatcct
tctatcacctcccctcctcacaccaggtccagcttacagtttcattctgtgactagccct
cccccacctgcccagcaatttcctcttaaagaggtggctggagctaaaggcatagtcaag
ccatgtcccatctgtgtgggaccccattggaaattggactgtccaactcccctggcagcc
actcccagagcccctggaaccctggcccaaggctctctgactgactccttcccagatctt
cttggcttagcagctgaaactgatgctgcccaatcacctcggaagcctcctggaccatca
cagatgcttttggtaactcttacagtggaggcacactttaaaaggattaaagcccgttat
cactcacctgttacagcatggccttttaaagcctataaactctccttacaattcccccat
tttacctgtccaaaaactggacaagtcttacaagttagttcaggatctgtgccttaccaa
ccaaattgttttgcctatccaccccatggtgccaaacccatatactctcctattctcaat
acctccctccacaacccctctacaacccataattctgttctggatctcaaacatgctttc
tttactattcctttgcacccttcatcccagcctctgtttgctttcacttggactgaccct
gacacccatcagcctcagcaacttacctgggctgtactgccacagggcttcacggacagc
ccccattacttcagtcgagcccaaatttcttcctcatccatccattacctatcttggcat
aattcttcatga

>gi568815597r:70162720_70454408|GENSCAN_predicted_peptide_5|550_aa
MIIHCGEGVGEEDMTKMLEKSSFRHRKHWVITEFSVPKTQAVTDENPSCKLGGLGNCFLN
HPPRCGLRLLAPPSGQRMVVRGDPCGPGSRAMDLQGCSAPHLTVHHVQARGAWPALGELG
LSGAVHSWAVKEIRLMNLKGMVQLQVMGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFAS
GLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITP
ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLALGADISMYS
ATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKTLHVRMEKH
FKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFL
KNLKLFTLAESLGGFESLAELPFFKASEDIGTRSSLRSYSPAAYFTGKETKIQKVELIDS
SVTQERVRSFTLGFASETVRGGKRAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLL
EDLDQALKAA

>gi568815597r:70162720_70454408|GENSCAN_predicted_CDS_5|1650_bp
atgattatacactgtggggaaggagttggagaagaagacatgacaaaaatgttggagaag
tcatcgtttcgtcatcgtaagcactgggtcattacagagttcagtgtacctaaaacgcaa
gctgtgactgatgagaatccaagctgcaaactgggcggcttgggcaactgttttcttaac
caccctccacgttgtggcttacgtcttttagcaccgccctcagggcaaaggatggtggtc
agaggcgatccatgtgggccaggatccagagcaatggacctccagggctgtagtgccccc
catctcactgtccaccacgttcaagcaaggggcgcctggccagcactcggtgagctgggt
ctgtctggggctgtccacagttgggcggtaaaagagatacggcttatgaatttgaaaggc
atggtacagctgcaggtcatgggttttgaatatagccgttctggaaatcccactaggaat
tgccttgaaaaagcagtggcagcactggatggggctaagtactgtttggcctttgcttca
ggtttagcagccactgtaactattacccatcttttaaaagcaggagaccaaattatttgt
atggatgatgtgtatggaggtacaaacaggtacttcaggcaagtggcatctgaatttgga
ttaaagatttcttttgttgattgttccaaaatcaaattactagaggcagcaattacacca
gaaaccaagcttgtttggatcgaaacccccacaaaccccacccagaaggtgattgacatt
gaaggctgtgcacatattgtccataagcatggagacattattttggtcgtggataacact
tttatgtcaccatatttccagcgccctttggctctgggagctgatatttctatgtattct
gcaacaaaatacatgaatggccacagtgatgttgtaatgggcctggtgtctgttaattgt
gaaagccttcataatagacttcgtttcttgcaaaactctcttggagcagttccatctcct
attgattgttacctctgcaatcgaggtctgaagactctacatgtccgaatggaaaagcat
ttcaaaaacggaatggcagttgcccagttcctggaatctaatccttgggtagaaaaggtt
atttatcctgggctgccctctcatccacagcatgagttggtgaagcgtcagtgtacaggt
tgtacagggatggtcaccttttatattaagggcactcttcagcatgctgagattttcctc
aagaacctaaagctatttactctggccgagagcttgggaggattcgaaagccttgctgag
cttccttttttcaaagcatcagaggatattggtacaagaagcagtctaagatcatacagt
ccagcagcttattttacaggcaaggaaacaaagatccagaaagttgagctgattgactca
agtgtcacacaggaacgtgttcgcagcttcactcttggatttgcatcagaaacagtgagg
ggaggtaaaagggcaatcatgactcatgcatcagttcttaagaatgacagagatgtcctt
ggaattagtgacacactgattcgactttctgtgggcttagaggatgaggaagacctactg
gaagatctagatcaagctttgaaggcagca