Result of FASTA (ccds) for pF1KB8689
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8689, 450 aa
  1>>>pF1KB8689 450 - 450 aa - 450 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3369+/-0.000734; mu= 17.9720+/- 0.044
 mean_var=70.1362+/-13.934, 0's: 0 Z-trim(109.3): 16  B-trim: 11 in 1/48
 Lambda= 0.153145
 statistics sampled from 10786 (10797) to 10786 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.332), width:  16
 Scan time:  3.250

The best scores are:                                      opt bits E(32554)
CCDS45357.1 RGMA gene_id:56963|Hs108|chr15         ( 450) 3089 691.4  5e-199
CCDS53974.1 RGMA gene_id:56963|Hs108|chr15         ( 458) 3055 683.9 9.2e-197
CCDS53973.1 RGMA gene_id:56963|Hs108|chr15         ( 434) 2972 665.5 2.9e-191
CCDS47251.1 RGMB gene_id:285704|Hs108|chr5         ( 478) 1307 297.7 1.7e-80
CCDS72879.1 HFE2 gene_id:148738|Hs108|chr1         ( 426) 1002 230.2   3e-60
CCDS72878.1 HFE2 gene_id:148738|Hs108|chr1         ( 313)  779 180.9 1.6e-45
CCDS72877.1 HFE2 gene_id:148738|Hs108|chr1         ( 200)  366 89.5 3.3e-18


>>CCDS45357.1 RGMA gene_id:56963|Hs108|chr15              (450 aa)
 initn: 3089 init1: 3089 opt: 3089  Z-score: 3686.7  bits: 691.4 E(32554): 5e-199
Smith-Waterman score: 3089; 100.0% identity (100.0% similar) in 450 aa overlap (1-450:1-450)

               10        20        30        40        50        60
pF1KB8 MQPPRERLVVTGRAGWMGMGRGAGRSALGFWPTLAFLLCSFPAATSPCKILKCNSEFWSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MQPPRERLVVTGRAGWMGMGRGAGRSALGFWPTLAFLLCSFPAATSPCKILKCNSEFWSA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 TSGSHAPASDDTPEFCAALRSYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TSGSHAPASDDTPEFCAALRSYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 TSQPRLRTLPPAGDSQERSDSPEICHYEKSFHKHSATPNYTHCGLFGDPHLRTFTDRFQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TSQPRLRTLPPAGDSQERSDSPEICHYEKSFHKHSATPNYTHCGLFGDPHLRTFTDRFQT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 CKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 CKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 AAFVDGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 AAFVDGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 VNAVEDWDSQGLYLCLRGCPLNQQIDFQAFHTNAEGTGARRLAAASPAPTAPETFPYETA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VNAVEDWDSQGLYLCLRGCPLNQQIDFQAFHTNAEGTGARRLAAASPAPTAPETFPYETA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 VAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYERTRDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYERTRDL
              370       380       390       400       410       420

              430       440       450
pF1KB8 PGRAAAGLPLAPRPLLGALVPLLALLPVFC
       ::::::::::::::::::::::::::::::
CCDS45 PGRAAAGLPLAPRPLLGALVPLLALLPVFC
              430       440       450

>>CCDS53974.1 RGMA gene_id:56963|Hs108|chr15              (458 aa)
 initn: 3055 init1: 3055 opt: 3055  Z-score: 3646.0  bits: 683.9 E(32554): 9.2e-197
Smith-Waterman score: 3055; 100.0% identity (100.0% similar) in 446 aa overlap (5-450:13-458)

                       10        20        30        40        50  
pF1KB8         MQPPRERLVVTGRAGWMGMGRGAGRSALGFWPTLAFLLCSFPAATSPCKILK
                   ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MGGLGPRRAGTSRERLVVTGRAGWMGMGRGAGRSALGFWPTLAFLLCSFPAATSPCKILK
               10        20        30        40        50        60

             60        70        80        90       100       110  
pF1KB8 CNSEFWSATSGSHAPASDDTPEFCAALRSYALCTRRTARTCRGDLAYHSAVHGIEDLMSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 CNSEFWSATSGSHAPASDDTPEFCAALRSYALCTRRTARTCRGDLAYHSAVHGIEDLMSQ
               70        80        90       100       110       120

            120       130       140       150       160       170  
pF1KB8 HNCSKDGPTSQPRLRTLPPAGDSQERSDSPEICHYEKSFHKHSATPNYTHCGLFGDPHLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 HNCSKDGPTSQPRLRTLPPAGDSQERSDSPEICHYEKSFHKHSATPNYTHCGLFGDPHLR
              130       140       150       160       170       180

            180       190       200       210       220       230  
pF1KB8 TFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVY
              190       200       210       220       230       240

            240       250       260       270       280       290  
pF1KB8 QAEMDELPAAFVDGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QAEMDELPAAFVDGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTF
              250       260       270       280       290       300

            300       310       320       330       340       350  
pF1KB8 AVRMPEEVVNAVEDWDSQGLYLCLRGCPLNQQIDFQAFHTNAEGTGARRLAAASPAPTAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 AVRMPEEVVNAVEDWDSQGLYLCLRGCPLNQQIDFQAFHTNAEGTGARRLAAASPAPTAP
              310       320       330       340       350       360

            360       370       380       390       400       410  
pF1KB8 ETFPYETAVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ETFPYETAVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLH
              370       380       390       400       410       420

            420       430       440       450
pF1KB8 LYERTRDLPGRAAAGLPLAPRPLLGALVPLLALLPVFC
       ::::::::::::::::::::::::::::::::::::::
CCDS53 LYERTRDLPGRAAAGLPLAPRPLLGALVPLLALLPVFC
              430       440       450        

>>CCDS53973.1 RGMA gene_id:56963|Hs108|chr15              (434 aa)
 initn: 2972 init1: 2972 opt: 2972  Z-score: 3547.2  bits: 665.5 E(32554): 2.9e-191
Smith-Waterman score: 2972; 100.0% identity (100.0% similar) in 434 aa overlap (17-450:1-434)

               10        20        30        40        50        60
pF1KB8 MQPPRERLVVTGRAGWMGMGRGAGRSALGFWPTLAFLLCSFPAATSPCKILKCNSEFWSA
                       ::::::::::::::::::::::::::::::::::::::::::::
CCDS53                 MGMGRGAGRSALGFWPTLAFLLCSFPAATSPCKILKCNSEFWSA
                               10        20        30        40    

               70        80        90       100       110       120
pF1KB8 TSGSHAPASDDTPEFCAALRSYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TSGSHAPASDDTPEFCAALRSYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGP
           50        60        70        80        90       100    

              130       140       150       160       170       180
pF1KB8 TSQPRLRTLPPAGDSQERSDSPEICHYEKSFHKHSATPNYTHCGLFGDPHLRTFTDRFQT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 TSQPRLRTLPPAGDSQERSDSPEICHYEKSFHKHSATPNYTHCGLFGDPHLRTFTDRFQT
          110       120       130       140       150       160    

              190       200       210       220       230       240
pF1KB8 CKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 CKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELP
          170       180       190       200       210       220    

              250       260       270       280       290       300
pF1KB8 AAFVDGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 AAFVDGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEV
          230       240       250       260       270       280    

              310       320       330       340       350       360
pF1KB8 VNAVEDWDSQGLYLCLRGCPLNQQIDFQAFHTNAEGTGARRLAAASPAPTAPETFPYETA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VNAVEDWDSQGLYLCLRGCPLNQQIDFQAFHTNAEGTGARRLAAASPAPTAPETFPYETA
          290       300       310       320       330       340    

              370       380       390       400       410       420
pF1KB8 VAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYERTRDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYERTRDL
          350       360       370       380       390       400    

              430       440       450
pF1KB8 PGRAAAGLPLAPRPLLGALVPLLALLPVFC
       ::::::::::::::::::::::::::::::
CCDS53 PGRAAAGLPLAPRPLLGALVPLLALLPVFC
          410       420       430    

>>CCDS47251.1 RGMB gene_id:285704|Hs108|chr5              (478 aa)
 initn: 1137 init1: 525 opt: 1307  Z-score: 1558.5  bits: 297.7 E(32554): 1.7e-80
Smith-Waterman score: 1331; 51.5% identity (74.1% similar) in 406 aa overlap (39-431:89-466)

       10        20        30        40        50        60        
pF1KB8 VVTGRAGWMGMGRGAGRSALGFWPTLAFLLCSFPAATSPCKILKCNSEFWSATSGSHAPA
                                     :. ::    :.: ::...: : ::  .. .
CCDS47 EQRRSPGLCPPPLELLLLLLFSLGLLHAGDCQQPAQ---CRIQKCTTDFVSLTSHLNSAV
       60        70        80        90          100       110     

       70        80        90       100       110       120        
pF1KB8 SDDTPEFCAALRSYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGPTSQPRLRT
       .    ::: :::.:: ::.::...:::.:.::::: :: :::::.:::::::::      
CCDS47 DGFDSEFCKALRAYAGCTQRTSKACRGNLVYHSAVLGISDLMSQRNCSKDGPTS------
         120       130       140       150       160               

      130       140       150                 160       170        
pF1KB8 LPPAGDSQERSDSPEICHYEKSFHKHSAT----------PNYTHCGLFGDPHLRTFTDRF
                 : .::. :   ..:.:...          :.:  :::::::::::: : :
CCDS47 ----------STNPEVTHDPCNYHSHAGAREHRRGDQNPPSYLFCGLFGDPHLRTFKDNF
               170       180       190       200       210         

      180       190       200       210       220       230        
pF1KB8 QTCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDE
       :::::.:::::::::::.:::::.::.:::.::::.:.:::::  .::.:::::::  :.
CCDS47 QTCKVEGAWPLIDNNYLSVQVTNVPVVPGSSATATNKITIIFKAHHECTDQKVYQAVTDD
     220       230       240       250       260       270         

      240       250       260       270       280       290        
pF1KB8 LPAAFVDGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPE
       ::::::::. .:::.  :.::.:.:. ::..::..:.:::::. :::::::::.:.::::
CCDS47 LPAAFVDGTTSGGDSD-AKSLRIVERESGHYVEMHARYIGTTVFVRQVGRYLTLAIRMPE
     280       290        300       310       320       330        

      300       310       320       330       340       350        
pF1KB8 EVVNAVEDWDSQGLYLCLRGCPLNQQIDFQAFHTNAEGTGARRLAAASPAPTAPETFP--
       ... . :  .:: : ::. ::::...::      ...:  .  :. . :  .  ...:  
CCDS47 DLAMSYE--ESQDLQLCVNGCPLSERID------DGQGQVSAILGHSLPRTSLVQAWPGY
      340         350       360             370       380       390

         360       370       380       390       400       410     
pF1KB8 -YETAVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYE
         ::: ..:.::.::.:.:.:.::::::::::.::: ::. :::::. ::  :.. :.. 
CCDS47 TLETANTQCHEKMPVKDIYFQSCVFDLLTTGDANFTAAAHSALEDVEALHPRKERWHIFP
              400       410       420       430       440       450

         420       430       440       450
pF1KB8 RTRDLPGRAAAGLPLAPRPLLGALVPLLALLPVFC
        . .   :... : ..                   
CCDS47 SSGNGTPRGGSDLSVSLGLTCLILIVFL       
              460       470               

>>CCDS72879.1 HFE2 gene_id:148738|Hs108|chr1              (426 aa)
 initn: 1244 init1: 900 opt: 1002  Z-score: 1195.0  bits: 230.2 E(32554): 3e-60
Smith-Waterman score: 1232; 47.9% identity (67.9% similar) in 445 aa overlap (25-446:11-421)

               10        20        30             40        50     
pF1KB8 MQPPRERLVVTGRAGWMGMGRGAGRSALGFWPTLA-----FLLCSFPAATSPCKILKCNS
                               ::. :  :::.     .:::.   : : ::::.::.
CCDS72               MGEPGQSPSPRSSHGSPPTLSTLTLLLLLCGH--AHSQCKILRCNA
                             10        20        30          40    

          60                       70        80        90       100
pF1KB8 EFWSAT---------------SGSHAPASDDTPEFCAALRSYALCTRRTARTCRGDLAYH
       :. :.:               .:.   ..  .  .: :::::::::::::::::::::.:
CCDS72 EYVSSTLSLRGGGSSGALRGGGGGGRGGGVGSGGLCRALRSYALCTRRTARTCRGDLAFH
           50        60        70        80        90       100    

              110       120         130       140       150        
pF1KB8 SAVHGIEDLMSQHNCSKDGPTSQPRLR--TLPPAGDSQERSDSPEICHYEKSFHK-HSAT
       :::::::::: :::::..:::. :  :  .:: ::..     .:. : ::  : . :.  
CCDS72 SAVHGIEDLMIQHNCSRQGPTAPPPPRGPALPGAGSGLP---APDPCDYEGRFSRLHGRP
          110       120       130       140          150       160 

       160       170       180       190       200       210       
pF1KB8 PNYTHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLT
       :.. ::. :::::.:.:  .:.::.:::::::.::..: ::.:..:.  :. :::: :::
CCDS72 PGFLHCASFGDPHVRSFHHHFHTCRVQGAWPLLDNDFLFVQATSSPMALGANATATRKLT
             170       180       190       200       210       220 

       220       230       240       250       260       270       
pF1KB8 IIFKNFQECVDQKVYQAEMDELPAAFVDGSKNGGDKHGANSLKITEKVSGQHVEIQAKYI
       :::::.:::.::::::::.:.::.:: ::: ::::. :..::.:     :.:::::: ::
CCDS72 IIFKNMQECIDQKVYQAEVDNLPVAFEDGSINGGDRPGGSSLSIQTANPGNHVEIQAAYI
             230       240       250       260       270       280 

       280       290       300       310       320       330       
pF1KB8 GTTIVVRQVGRYLTFAVRMPEEVVNAVEDWDSQGLYLCLRGCPLNQQIDFQAFHTNAEGT
       ::::..::..  :.:.... :.:. :      : : ::. ::: .:..        ... 
CCDS72 GTTIIIRQTAGQLSFSIKVAEDVAMAFSA--EQDLQLCVGGCPPSQRL--------SRSE
             290       300       310         320               330 

       340       350       360       370       380       390       
pF1KB8 GARRLAAASPAPTAPETFPYETAVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYA
         :: : .            .::   ::: ::::: :...::::.: .:: :::.::  :
CCDS72 RNRRGAIT-----------IDTARRLCKEGLPVEDAYFHSCVFDVLISGDPNFTVAAQAA
                        340       350       360       370       380

       400       410       420       430       440       450 
pF1KB8 LEDVKMLHSNKDKLHLYERTRDLPGRAAAGLPLAPRPLLGALVPLLALLPVFC 
       :::.. .  . .::::.      :  . ::.::.   ::. :.  : .:     
CCDS72 LEDARAFLPDLEKLHLF------P--SDAGVPLSSATLLAPLLSGLFVLWLCIQ
              390               400       410       420      

>>CCDS72878.1 HFE2 gene_id:148738|Hs108|chr1              (313 aa)
 initn: 947 init1: 677 opt: 779  Z-score: 930.7  bits: 180.9 E(32554): 1.6e-45
Smith-Waterman score: 956; 47.1% identity (68.8% similar) in 340 aa overlap (110-446:1-308)

      80        90       100       110       120         130       
pF1KB8 RSYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGPTSQPRLR--TLPPAGDSQE
                                     : :::::..:::. :  :  .:: ::..  
CCDS72                               MIQHNCSRQGPTAPPPPRGPALPGAGSGLP
                                             10        20        30

       140       150        160       170       180       190      
pF1KB8 RSDSPEICHYEKSFHK-HSATPNYTHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLN
          .:. : ::  : . :.  :.. ::. :::::.:.:  .:.::.:::::::.::..: 
CCDS72 ---APDPCDYEGRFSRLHGRPPGFLHCASFGDPHVRSFHHHFHTCRVQGAWPLLDNDFLF
                  40        50        60        70        80       

        200       210       220       230       240       250      
pF1KB8 VQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELPAAFVDGSKNGGDKHGA
       ::.:..:.  :. :::: ::::::::.:::.::::::::.:.::.:: ::: ::::. :.
CCDS72 VQATSSPMALGANATATRKLTIIFKNMQECIDQKVYQAEVDNLPVAFEDGSINGGDRPGG
        90       100       110       120       130       140       

        260       270       280       290       300       310      
pF1KB8 NSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVNAVEDWDSQGLYLCL
       .::.:     :.:::::: ::::::..::..  :.:.... :.:. :      : : ::.
CCDS72 SSLSIQTANPGNHVEIQAAYIGTTIIIRQTAGQLSFSIKVAEDVAMAFSA--EQDLQLCV
       150       160       170       180       190         200     

        320       330       340       350       360       370      
pF1KB8 RGCPLNQQIDFQAFHTNAEGTGARRLAAASPAPTAPETFPYETAVAKCKEKLPVEDLYYQ
        ::: .:..        ...   :: : .            .::   ::: ::::: :..
CCDS72 GGCPPSQRL--------SRSERNRRGAIT-----------IDTARRLCKEGLPVEDAYFH
         210               220                  230       240      

        380       390       400       410       420       430      
pF1KB8 ACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYERTRDLPGRAAAGLPLAPRPLL
       .::::.: .:: :::.::  ::::.. .  . .::::.      :  . ::.::.   ::
CCDS72 SCVFDVLISGDPNFTVAAQAALEDARAFLPDLEKLHLF------P--SDAGVPLSSATLL
        250       260       270       280               290        

        440       450 
pF1KB8 GALVPLLALLPVFC 
       . :.  : .:     
CCDS72 APLLSGLFVLWLCIQ
      300       310   

>>CCDS72877.1 HFE2 gene_id:148738|Hs108|chr1              (200 aa)
 initn: 591 init1: 321 opt: 366  Z-score: 440.4  bits: 89.5 E(32554): 3.3e-18
Smith-Waterman score: 543; 44.4% identity (65.5% similar) in 223 aa overlap (224-446:2-195)

           200       210       220       230       240       250   
pF1KB8 YLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELPAAFVDGSKNGGDK
                                     :::.::::::::.:.::.:: ::: ::::.
CCDS72                              MQECIDQKVYQAEVDNLPVAFEDGSINGGDR
                                            10        20        30 

           260       270       280       290       300       310   
pF1KB8 HGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVNAVEDWDSQGLY
        :..::.:     :.:::::: ::::::..::..  :.:.... :.:. :      : : 
CCDS72 PGGSSLSIQTANPGNHVEIQAAYIGTTIIIRQTAGQLSFSIKVAEDVAMAFSA--EQDLQ
              40        50        60        70        80           

           320       330       340       350       360       370   
pF1KB8 LCLRGCPLNQQIDFQAFHTNAEGTGARRLAAASPAPTAPETFPYETAVAKCKEKLPVEDL
       ::. ::: .:..        ...   :: : .            .::   ::: ::::: 
CCDS72 LCVGGCPPSQRL--------SRSERNRRGAIT-----------IDTARRLCKEGLPVEDA
      90       100               110                  120       130

           380       390       400       410       420       430   
pF1KB8 YYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYERTRDLPGRAAAGLPLAPR
       :...::::.: .:: :::.::  ::::.. .  . .::::.      :  . ::.::.  
CCDS72 YFHSCVFDVLISGDPNFTVAAQAALEDARAFLPDLEKLHLF------P--SDAGVPLSSA
              140       150       160       170               180  

           440       450 
pF1KB8 PLLGALVPLLALLPVFC 
        ::. :.  : .:     
CCDS72 TLLAPLLSGLFVLWLCIQ
            190       200




450 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 14:36:49 2016 done: Fri Nov  4 14:36:50 2016
 Total Scan time:  3.250 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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