GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:35:20

Sequence gi568815592f:73294906_73516223 : 221318 bp : 43.85% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1686   1681    6                               1.05
 1.03 Term -   4538   4243  296  0  2   61   34   173 0.877   4.67
 1.02 Intr -  14823  14647  177  1  0   78  105   104 0.911  10.99
 1.01 Init -  16548  16386  163  0  1   70   72    71 0.799   3.60
 1.00 Prom -  17494  17455   40                              -4.96

 2.00 Prom +  19195  19234   40                              -2.46
 2.01 Init +  27941  28048  108  1  0   52   94   168 0.970  14.02
 2.02 Term +  28212  28373  162  2  0   13   42   177 0.816   3.54
 2.03 PlyA +  29220  29225    6                               1.05

 3.06 PlyA -  32995  32990    6                               1.05
 3.05 Term -  46604  46506   99  2  0   68   47    53 0.003  -2.67
 3.04 Intr -  58844  58741  104  0  2   94   64    39 0.403   1.99
 3.03 Intr -  59127  58948  180  1  0  101   78   331 0.915  33.24
 3.02 Intr -  59365  59209  157  1  1    3  109   181 0.551  11.28
 3.01 Init -  59468  59409   60  2  0   78   80    55 0.571   2.95
 3.00 Prom -  62871  62832   40                              -4.76

 4.00 Prom +  63749  63788   40                              -8.26
 4.01 Init +  67490  67554   65  1  2   51   61    54 0.804  -0.37
 4.02 Intr +  67812  67993  182  0  2  116  109   139 0.940  18.31
 4.03 Intr +  68190  68369  180  1  0   82  102   154 0.462  16.04
 4.04 Term +  68651  68955  305  0  2   92   49   260 0.962  17.83
 4.05 PlyA +  69101  69106    6                               1.05

 5.05 PlyA -  70006  70001    6                               1.05
 5.04 Term -  73958  73879   80  0  2   86   47    51 0.837  -1.27
 5.03 Intr -  74480  74301  180  0  0   60   78   143 0.843  10.34
 5.02 Intr -  74788  74698   91  1  1   53   85   103 0.532   6.07
 5.01 Init -  75054  74815  240  0  0   88   35   245 0.433  15.07
 5.00 Prom -  85687  85648   40                              -2.46

 6.00 Prom +  86775  86814   40                              -2.16
 6.01 Init + 100001 100243  243  1  0   73   31    99 0.034   0.16
 6.02 Intr + 105329 105458  130  1  1   98  111    72 0.691  10.77
 6.03 Intr + 109785 109866   82  1  1   66   90    49 0.761   1.60
 6.04 Intr + 113055 113196  142  0  1   95   17    83 0.744   2.26
 6.05 Intr + 114343 114443  101  0  2  107   98    68 0.563   8.61
 6.06 Term + 127631 127733  103  2  1   42   50    66 0.090  -4.05
 6.07 PlyA + 127737 127742    6                               1.05

 7.05 PlyA - 128688 128683    6                               1.05
 7.04 Term - 144287 144190   98  0  2   78   48    71 0.882   0.23
 7.03 Intr - 145540 145304  237  2  0   70   63    70 0.493   0.29
 7.02 Intr - 150842 150623  220  2  1   76  116   135 0.989  12.97
 7.01 Init - 157276 156620  657  1  0   91  105   450 0.592  41.87
 7.00 Prom - 159169 159130   40                              -9.75

 8.00 Prom + 161452 161491   40                              -3.36
 8.01 Init + 164607 164773  167  2  2   78   86    86 0.698   6.55
 8.02 Intr + 166949 167166  218  2  2   28   85   237 0.651  15.55
 8.03 Intr + 171304 171503  200  2  2   79  110    44 0.956   4.77
 8.04 Intr + 171584 171701  118  1  1   81   79    17 0.665   0.14
 8.05 Intr + 178460 178749  290  0  2  100  116    41 0.949   5.06
 8.06 Intr + 184827 184939  113  2  2   58   99    55 0.977   2.78
 8.07 Intr + 185031 185221  191  0  2   79  103    63 0.977   6.13
 8.08 Intr + 185770 185900  131  2  2   80   71    93 0.998   7.21
 8.09 Intr + 187135 187339  205  0  1   44   78   169 0.699  10.27
 8.10 Intr + 187544 187715  172  0  1  121   85   -32 0.427  -1.20
 8.11 Intr + 197329 197447  119  1  2   63   70    95 0.491   5.31
 8.12 Intr + 202831 202991  161  2  2   34  107    71 0.799   3.31
 8.13 Term + 205669 205830  162  0  0   61   33   136 0.966   3.34
 8.14 PlyA + 206112 206117    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  48306  48376   71  1  2  110   42    54 0.830   1.10
S.002 Intr - 100266 100162  105  1  0   54   36   149 0.802   6.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:73294906_73516223|GENSCAN_predicted_peptide_1|211_aa
MDKFLDTYTLPRLNQEKTESLNRPITGSEIEPIINSLPTKKVQDQKDSQPNSTRGQKREM
LSAFQRLFRVLFVIETVSEYGVLIFIYGWPFLQTLAMLLIGTVSFHLWIRRNRAPQSAAP
LEENVNRAVSNKAAHGTVRLTWLLVVGGVSPFSRGGCCAHPRGCAPENGQTPPGILLLKE
KHQLSPERALDPRRPSPVLVQLRAVGGIWWL

>gi568815592f:73294906_73516223|GENSCAN_predicted_CDS_1|636_bp
atggataaattcctggacacatacaccctcccaagactaaaccaggaaaaaactgaatcc
ctgaatagaccaataacaggctctgaaattgagccaataattaatagcctaccaaccaaa
aaagtccaggaccagaaggattcacagccgaattctaccagaggccagaaacgcgaaatg
ctgtcggccttccagaggctgttccgagtcttatttgtgattgaaacagtctcagaatac
ggagtcctgatcttcatttatggatggccctttctccagacccttgcgatgctcctgatc
gggacagtgtctttccacctttggatccgcagaaatcgagctccgcagtcagcggctccg
ttggaagagaatgtgaaccgcgctgtctccaacaaagctgctcacggaacagtgcgttta
acttggctgctggtcgtcggaggcgtcagtcccttcagcaggggcggctgctgtgcccac
ccccggggctgtgcgccagagaacggtcagactccgccagggattcttctcctgaaagaa
aagcaccaactatctcccgagcgagctctcgacccacgaaggccctcccccgtgctggtc
cagctgcgtgctgtcggtggcatctggtggctctag

>gi568815592f:73294906_73516223|GENSCAN_predicted_peptide_2|89_aa
MWYEIKAQVHNIHLCKDKHGKTGLQLQTTNKGLFVQDRIVQWIVTMHKDSTSHGGFIIKK
GKVFPVVKGSSVVLKDSSPTTMCARFKNV

>gi568815592f:73294906_73516223|GENSCAN_predicted_CDS_2|270_bp
atgtggtatgagatcaaggcccaggtacacaacatccacctgtgcaaagacaaacatggc
aagactgggctgcagctgcagaccaccaacaaggggctctttgtgcaggacaggatagtc
cagtggattgtcaccatgcacaaggacagcacaagccatggtggcttcatcatcaagaag
ggaaaggtcttccctgtggtcaaagggagctctgtggtcctcaaggactcttcaccaacc
accatgtgtgccaggttcaagaacgtttaa

>gi568815592f:73294906_73516223|GENSCAN_predicted_peptide_3|199_aa
MDSGSWPGPGAGPGRGRGHQAWFALESGLGCEGHKMGTLPARRHIPPWVKVPEDLKDPEV
FQVQTRLLKAIFGPDGSRIPYIEQVSKAMLELKALESSDLTEVVVYGSYLYKLRTKWMLQ
SMAEWHRQRQERAPWASPGVPLASGPSQDPFGNGGPRMPAVGLGDPGTQHHYCYAHFISE
KTEVEEVKGPNTVILKVAP

>gi568815592f:73294906_73516223|GENSCAN_predicted_CDS_3|600_bp
atggactcagggtcctggcccgggccgggggcggggcctggccgggggcggggccaccag
gcctggtttgcgctggagagtggtcttggttgtgagggtcataagatgggaactctcccg
gcacgtagacatatcccgccgtgggtgaaagttcccgaagacctgaaagatccagaggtg
ttccaggtccagacgcggctgctgaaagccattttcggcccggacggatctcgaatccct
tacatcgagcaggtgagcaaggccatgctcgagctgaaggctctggagtcttcagacctc
accgaggtcgtggtttacggctcctatttgtacaagctccggaccaagtggatgctccag
tccatggctgagtggcaccgccagcgccaggagcgagcaccttgggcgtcaccaggggtg
cccttggcatctgggccttcccaagacccctttgggaatgggggccccagaatgccggcc
gtcggtcttggagacccagggacacaacatcactattgttatgcccattttatcagtgag
aaaactgaagttgaggaagttaagggtcctaataccgtcattctcaaagtggccccttga

>gi568815592f:73294906_73516223|GENSCAN_predicted_peptide_4|243_aa
MVKTPAGHQRIPGAQSPVPPTGTGRSMDAPRRFPTLVQLMQPKAMPVEVLGHLPKRFSWF
HSEFLKNPKVVRLEVWLVEKIFGRGGERIPHVQGMSQILIHVNRLDPNGEAEILVFGRPS
YQEDTIKMIMNLADYHRQLQAKGSGKALAQDVATQKAETQRSSIEVREAGTQRSVEVREA
GTQRSVEVQEVGTQGSPVEVQEAGTQQSLQAANKSGTQRSPEAASKAVTQRFREDARDPV
TRL

>gi568815592f:73294906_73516223|GENSCAN_predicted_CDS_4|732_bp
atggttaagactcccgctgggcaccagcggattcctggtgcccagagcccggttcctcct
accgggaccggccgcagcatggacgctcccaggcggtttccgacgctcgtgcaactgatg
cagccaaaagcaatgccagtggaggtgctcggtcacctccctaagcggttctcctggttc
cactctgagttcctgaagaatccgaaggtagttcgccttgaggtttggctggtggaaaag
atcttcggccggggcggagaacgcatcccgcacgtccagggtatgtcccaaatcttgatt
cacgtgaatcgattggaccctaacggcgaggctgagatcttggtatttgggaggccttct
taccaggaggacacaatcaagatgatcatgaacctggctgactatcaccgccagctccag
gcgaaaggctcaggaaaggccctcgcccaggatgtcgccactcagaaggccgagacccag
cggtcttcaatagaagtccgggaggccgggacgcagcgttcggtggaggtccgggaggcc
gggacccagcgttcggtggaagtccaggaggtcgggacacagggttctccggtggaggtg
caggaggccgggacccagcagtctctccaggctgccaacaagtcggggacccagcgatcc
cccgaagctgccagcaaggcagtgacccagcggtttcgcgaggatgcccgggacccagtt
actagattatga

>gi568815592f:73294906_73516223|GENSCAN_predicted_peptide_5|196_aa
MPGRRLHPLTPTRCEAPPEGAERVEYGKREPELRAWVWKRSCESRLERAPRLLVPVWSMM
LVPLSPSGANRLRPTPWSSCIRIRPWWFPVQELRDPLVFYLEAWLADELFGPDRAIIPEM
EWTSQALLTVDIVDSGNLVEITVFGRPRVQNRVKSMLLCLAWFHREHRARAEKMKHLEKN
LKAHASDPHSPQDPVA

>gi568815592f:73294906_73516223|GENSCAN_predicted_CDS_5|591_bp
atgccggggcgtcgcttgcacccgctcaccccgacgcggtgcgaggcgccgccggaaggg
gcggagcgggtcgaatatggtaaaagagagcccgagcttcgcgcctgggtctggaagagg
tcttgcgaaagccgcctcgagcgcgctccgcggctgctggtcccagtatggtcgatgatg
ctggtgccgctgagtcccagcggggcaaacagactccggcccactccctggagcagctgc
attcgcatccggccctggtggtttccggtgcaggaactgagagaccctttggtgttctac
ctagaggcatggctggcagacgagctctttggcccagaccgagccataattccagaaatg
gagtggacgagccaggccctgctgacagtggacatagtggactcagggaacctagtcgaa
atcaccgttttcgggcggccccgtgtacagaatcgggtgaagagcatgctcctgtgcctg
gcatggtttcaccgagaacatcgtgcccgagctgagaagatgaaacaccttgagaagaac
ttgaaggcccatgcatcagacccccactctccccaggatcctgttgcttaa

>gi568815592f:73294906_73516223|GENSCAN_predicted_peptide_6|266_aa
MSHHGGAPKASTWVVASRRSSTVSRAPERRPAEELNRTGPEGYSVGRGGRWRGTSRPPEA
VAAGHEELPLCFALKSHFVGAIIQEQPESLVKIFGSKAMQTKAKAVIDNFVKKLEENYNS
ECGIDLPPIKKNFYKESTATSAMSKVEADSWSVCVYGGGNRDEQIEELKKGVDIIIATPG
RLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSQASDEAT
ALADVLIIALRDSEQSHTQNFGPLKM

>gi568815592f:73294906_73516223|GENSCAN_predicted_CDS_6|801_bp
atgtcccaccacggaggagctcccaaggcctctacgtgggtcgttgctagtcggcgaagc
tcgacagtgtcccgagcgccagagaggaggccggcggaggagttgaatcgaacaggtcct
gagggatatagtgtcggcagaggtggtcgctggagaggcacctctaggcccccggaggcc
gtggccgctggtcacgaggaactgccgctgtgttttgctttgaagagccactttgttggc
gcgataatacaagaacaaccagaatcattagtcaaaatttttggcagcaaggcaatgcaa
acgaaagcaaaagcagtgatagacaattttgttaaaaagctagaagaaaattacaattca
gaatgcggaattgatttaccaccaattaagaaaaacttttataaagagtccactgccaca
agtgccatgtcaaaagtagaagcagatagttggagtgtttgtgtatatggtggtggaaat
agagatgaacaaatagaagagcttaaaaaaggtgtagatatcataattgcaactcccgga
agattgaatgatctgcaaatgagtaacttcgtcaatctgaagaatataacctacttggtt
ttagatgaagcagacaagatgttggacatgggatttgaaccccagataatgaagattttg
ttagatgtgcgcccagataggcagacagttatgaccagtcaagcctcagatgaggctaca
gcgctggctgacgtcttaattatagccttgagagactctgagcagagccacacccagaat
tttggcccactgaaaatgtga

>gi568815592f:73294906_73516223|GENSCAN_predicted_peptide_7|403_aa
MQPWHGKAMQRASEAGATAPKASARNARGAPMDPTESPAAPEAALPKAGKFGPARKSGSR
QKKSAPDTQERPPVRATGARAKKAPQRAQDTQPSDATSAPGAEGLEPPAAREPALSRAGS
CRQRGARCSTKPRPPPGPWDVPSPGLPVSAPILVRRDAAPGASKLRAVLEKLKLSRDDIS
TAAGMVKGVVDHLLLRLKCDSAFRGVGLLNTGSYYEHVKISAPNEFDVMFKLEVPRIQLE
EYSNTRAYYFVKFKRNPKENPLSQFLEGEILSASKMLSKFRKIIKEEINDIKDTDVIMKR
KRGGSPAVTLLISEKISVDITLALESKSSWPASTQEGLRIQNWLSAKVRKQLRLKPFYLV
PKHAKEGNGFQDLYRTFGTYYYWIPGKLKETIKQMNQVINEYC

>gi568815592f:73294906_73516223|GENSCAN_predicted_CDS_7|1212_bp
atgcagccttggcacggaaaggccatgcagagagcttccgaggccggagccactgccccc
aaggcttccgcacggaatgccaggggcgccccgatggatcccaccgagtctccggctgcc
cccgaggccgccctgcctaaggcgggaaagttcggccccgccaggaagtcgggatcccgg
cagaaaaagagcgccccggacacccaggagaggccgcccgtccgcgcaactggggcccgc
gccaaaaaggcccctcagcgcgcccaggacacgcagccgtctgacgccaccagcgcccct
ggggcagaggggctggagcctcctgcggctcgggagccggctctttccagggctggttct
tgccgccagaggggcgcgcgctgctccacgaagccaagacctccgcccgggccctgggac
gtgcccagccccggcctgccggtctcggcccccattctcgtacggagggatgcggcgcct
ggggcctcgaagctccgggcggttttggagaagttgaagctcagccgcgatgatatctcc
acggcggcggggatggtgaaaggggttgtggaccacctgctgctcagactgaagtgcgac
tccgcgttcagaggcgtcgggctgctgaacaccgggagctactatgagcacgtgaagatt
tctgcacctaatgaatttgatgtcatgtttaaactggaagtccccagaattcaactagaa
gaatattccaacactcgtgcatattactttgtgaaatttaaaagaaatccgaaagaaaat
cctctgagtcagtttttagaaggtgaaatattatcagcttctaagatgctgtcaaagttt
aggaaaatcattaaggaagaaattaacgacattaaagatacagatgtcatcatgaagagg
aaaagaggagggagccctgctgtaacacttcttattagtgaaaaaatatctgtggatata
accctggctttggaatcaaaaagtagctggcctgctagcacccaagaaggcctgcgcatt
caaaactggctttcagcaaaagttaggaagcaactacgactaaagccattttaccttgta
cccaagcatgcaaaggaaggaaatggtttccaagatttatataggacttttggcacctac
tactattggattccagggaaattgaaggagaccataaaacaaatgaaccaagttataaat
gagtattgctga

>gi568815592f:73294906_73516223|GENSCAN_predicted_peptide_8|748_aa
MSQQRVMCFPLQRAYERTCITKIPIPEKQMFIALGMECNPCGKPLNGRMRGACPCGMFYF
RGCGRWVAVSFTKQQFPLARLSSDSAAPRTPHFDVIVIGGGHAGTEAATAAARCGSRTLL
LTHRVDTIGQMSCNPSFGGIGKGHLMREVDALDGLCSRICDQSGVHYKVLNRRKGPAVWG
LRAQIDRKLYKQNMQKEILNTPLLTVQEGAVEDLILTEPEPEHTGKCRVSGVVLVDGSTV
YAESVILTTGTFLRGMIVIGLETHPAGRLGDQPSIGLAQTLEKLGFVVGRLKTGTPPRIA
KESINFSILNKHIPDNPSIPFSFTNETVWIKPEDQLPCYLTHTNPRVDEIVLKNLHLNSH
VKETTRGPRYCPSIESKVLRFPNRLHQVWLEPEGMDSDLIYPQGLSMTLPAELQEKMITC
IRGLEKAKVIQPGYGVQYDYLDPRQITPSLETHLVQRLFFAGQINGTTGYEEAAAQGVIA
GINASLRVSRKPPFVVSRTEGYIGVLIDDLTTLGTSEPYRMFTSRVEFRLSLRPDNADSR
LTLRGYKDAGCVSQQRYERACWMKSSLEEGISVLKSIEFLSSKWKKLIPEASISTSRSLP
VRALDVLKYEEVDMDSLAKAVPEPLKKYTKCRELAERLKIEATYESVLFHQLQEIKGVQQ
DEALQLPKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASRIPGVTPAAIINLLRFVKTT
QRRQSAMNESSKTDQYLCDADRLQEREL

>gi568815592f:73294906_73516223|GENSCAN_predicted_CDS_8|2247_bp
atgagccaacagcgggtgatgtgcttccccctgcagagagcctatgaacggacgtgcatc
accaagattcctatcccagaaaagcagatgttcatagctctgggaatggaatgcaaccct
tgtggaaagcctctaaacggacgcatgaggggcgcctgtccctgtggcatgttctacttc
cgaggctgtggccgttgggtcgcggtttccttcaccaagcagcaatttccgttggcacgg
ttgagcagtgacagcgcggcgccccggactccgcacttcgacgtgatagtcattggtgga
ggacatgccgggactgaggcagccaccgccgccgctcggtgcggctctcggactctgctc
ctcactcaccgcgtggacacgatcggtcagatgtcatgtaatccttcctttggtggcatc
ggaaagggacatttaatgagggaagtagatgccttggatggcctgtgttctcgcatctgt
gaccagtctggtgtacattataaagtattaaaccggcgtaagggaccagctgtgtggggt
ctgagagctcagattgataggaaactctataaacagaacatgcagaaagaaatcttgaat
acaccactgcttactgttcaggagggagctgtagaagatcttattcttacagaaccagag
cctgaacacactgggaaatgccgtgtcagtggggttgttttggtggatggaagcacagta
tatgcagagagtgtgattctgactactgggacatttctgagaggcatgattgtaattgga
ttggagacgcatccagcaggacgtttaggggatcagccttctataggattggctcagaca
ctggagaagttagggtttgtggtgggaaggttgaagactgggactccaccccgaattgcc
aaagagtccattaatttcagtattctaaacaagcatataccggacaatccatccatacca
ttcagctttaccaatgagacagtatggattaagccagaagatcagctgccatgttacttg
actcacaccaaccctagagtggatgagattgtccttaagaaccttcaccttaatagtcat
gttaaagaaacgacaagaggacctcgatactgtccctccattgaatcaaaagttttgcgt
tttccaaaccgtctacatcaggtttggttggaacctgaaggaatggattctgaccttatc
tacccacaggggttatctatgacgctaccagctgagttacaagagaaaatgatcacatgc
atcagaggcttggagaaagctaaagtgattcagccaggctacggtgttcagtatgattac
ttagatccccgtcagatcaccccttccttggagactcatttggttcaacgactcttcttt
gctggacagatcaatggcaccactggttatgaggaagctgcagctcaaggtgtgatagcc
ggaatcaacgccagtcttcgggtcagtcgcaagcctccctttgtggttagccgaacagaa
ggttacataggagtcttgattgatgacctcactactctgggcaccagtgaaccataccgc
atgtttaccagccgagtagagttccgtttgtcactgcgccctgataatgctgacagccgg
ctcacactgcgagggtataaagacgctggctgtgtgtcccaacaacgatatgaaagagct
tgttggatgaagtcttctttagaagaaggcatttctgtgttgaaatctattgagtttttg
agctctaaatggaaaaaattaatcccagaggcttctataagtactagtagaagtctgcct
gtcagagctctcgatgttctgaagtatgaggaagttgacatggattcattagccaaggct
gttccagagcccttgaagaagtatactaaatgtagagagctggctgaaagactgaaaata
gaagccacttatgaatcagtgttgttccatcaactacaagaaataaagggagttcagcaa
gatgaagctctccaactgccaaaagacctagattatttgactatcagggatgtgtctttg
tcccatgaagttcgagagaaactacattttagtcgtccacagacgatcggggctgctagt
cgcatacccggagtaacacctgccgccatcatcaatctgctgagatttgtgaagaccact
caacgaagacagtcggctatgaatgaatcatccaagactgatcaatacttatgtgatgca
gacagacttcaagagagagagttatag