FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8684, 379 aa 1>>>pF1KB8684 379 - 379 aa - 379 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.7357+/-0.00105; mu= -0.5233+/- 0.063 mean_var=293.5133+/-59.741, 0's: 0 Z-trim(112.4): 5 B-trim: 8 in 1/54 Lambda= 0.074862 statistics sampled from 13133 (13136) to 13133 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.728), E-opt: 0.2 (0.404), width: 16 Scan time: 2.670 The best scores are: opt bits E(32554) CCDS3374.1 LYAR gene_id:55646|Hs108|chr4 ( 379) 2536 287.0 1.9e-77 >>CCDS3374.1 LYAR gene_id:55646|Hs108|chr4 (379 aa) initn: 2536 init1: 2536 opt: 2536 Z-score: 1503.9 bits: 287.0 E(32554): 1.9e-77 Smith-Waterman score: 2536; 100.0% identity (100.0% similar) in 379 aa overlap (1-379:1-379) 10 20 30 40 50 60 pF1KB8 MVFFTCNACGESVKKIQVEKHVSVCRNCECLSCIDCGKDFWGDDYKNHVKCISEDQKYGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MVFFTCNACGESVKKIQVEKHVSVCRNCECLSCIDCGKDFWGDDYKNHVKCISEDQKYGG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 KGYEGKTHKGDIKQQAWIQKISELIKRPNVSPKVRELLEQISAFDNVPRKKAKFQNWMKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 KGYEGKTHKGDIKQQAWIQKISELIKRPNVSPKVRELLEQISAFDNVPRKKAKFQNWMKN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 SLKVHNESILDQVWNIFSEASNSEPVNKEQDQRPLHPVANPHAEISTKVPASKVKDAVEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 SLKVHNESILDQVWNIFSEASNSEPVNKEQDQRPLHPVANPHAEISTKVPASKVKDAVEQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 QGEVKKNKRERKEERQKKRKREKKELKLENHQENSRNQKPKKRKKGQEADLEAGGEEVPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 QGEVKKNKRERKEERQKKRKREKKELKLENHQENSRNQKPKKRKKGQEADLEAGGEEVPE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 ANGSAGKRSKKKKQRKDSASEEEARVGAGKRKRRHSEVETDSKKKKMKLPEHPEGGEPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 ANGSAGKRSKKKKQRKDSASEEEARVGAGKRKRRHSEVETDSKKKKMKLPEHPEGGEPED 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB8 DEAPAKGKFNWKGTIKAILKQAPDNEITIKKLRKKVLAQYYTVTDEHHRSEEELLVIFNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 DEAPAKGKFNWKGTIKAILKQAPDNEITIKKLRKKVLAQYYTVTDEHHRSEEELLVIFNK 310 320 330 340 350 360 370 pF1KB8 KISKNPTFKLLKDKVKLVK ::::::::::::::::::: CCDS33 KISKNPTFKLLKDKVKLVK 370 379 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 14:33:44 2016 done: Fri Nov 4 14:33:45 2016 Total Scan time: 2.670 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]