GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:17:42

Sequence gi568815581r:38081977_38291029 : 209053 bp : 44.00% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  19427  19504   78  0  0   88  110    55 0.971   7.22
 1.02 Intr +  29425  29546  122  2  2   80   64    53 0.762   2.31
 1.03 Intr +  35564  35764  201  1  0   92   84   171 0.980  16.58
 1.04 Intr +  40824  40988  165  2  0  110   55    43 0.878   3.36
 1.05 Intr +  42063  42167  105  2  0   73   93   122 0.984  11.61
 1.06 Intr +  47214  47488  275  2  2   88   58    43 0.065  -2.36
 1.07 Intr +  47519  47591   73  2  1   90   82    60 0.932   5.01
 1.08 Intr +  47754  47839   86  2  2   81   79   118 0.944   8.82
 1.09 Intr +  49123  49162   40  1  1   80  116   -10 0.946  -0.77
 1.10 Intr +  49645  49725   81  0  0   52   92    42 0.606   0.83
 1.11 Intr +  50169  50276  108  2  0  102  101   154 0.993  18.58
 1.12 Intr +  50606  50715  110  1  2  102   82   163 0.997  16.18
 1.13 Intr +  51971  52019   49  2  1   97  117    85 0.987  10.98
 1.14 Intr +  52563  52683  121  2  1   92   44   146 0.646  10.67
 1.15 Intr +  52999  53051   53  2  2  100   38    77 0.409   2.53
 1.16 Intr +  54405  54504  100  2  1   91   89    93 0.541   9.38
 1.17 Intr +  54875  55027  153  0  0   85   80    88 0.496   7.74
 1.18 Intr +  56009  56221  213  0  0  101   49    81 0.416   4.19
 1.19 Term +  57937  58094  158  2  2   95   39   134 0.498   7.30
 1.20 PlyA +  61386  61391    6                               1.05

 2.00 Prom +  79360  79399   40                              -4.06
 2.01 Init +  85215  85217    3  2  0  113   81     0 0.651   1.80
 2.02 Term +  95617  95748  132  0  0  105   43   126 0.594   7.89
 2.03 PlyA +  96687  96692    6                               1.05

 3.24 PlyA -  96963  96958    6                               1.05
 3.23 Term -  98638  98481  158  2  2   95   39   134 0.161   7.30
 3.22 Intr - 100566 100354  213  1  0  101   49    81 0.134   4.19
 3.21 Intr - 101700 101548  153  1  0   85   80    88 0.181   7.74
 3.20 Intr - 102170 102071  100  2  1   91   89    78 0.197   7.88
 3.19 Intr - 103576 103524   53  2  2  100   38    82 0.158   3.03
 3.18 Intr - 104012 103892  121  2  1   92  110   146 0.994  17.27
 3.17 Intr - 104604 104556   49  2  1   97  117    85 0.987  10.98
 3.16 Intr - 105967 105858  110  1  2  102   82   146 0.997  14.48
 3.15 Intr - 106404 106297  108  0  0  102  101   153 0.993  18.48
 3.14 Intr - 106928 106848   81  2  0   52   92    42 0.607   0.83
 3.13 Intr - 107450 107411   40  1  1   80  116   -10 0.947  -0.77
 3.12 Intr - 108819 108734   86  0  2   81   79   118 0.945   8.82
 3.11 Intr - 109054 108982   73  0  1   90   82    60 0.935   5.01
 3.10 Intr - 109359 109085  275  0  2   88   58    49 0.097  -1.76
 3.09 Intr - 114495 114391  105  0  0   73   93   122 0.984  11.61
 3.08 Intr - 115734 115570  165  0  0  110   55    43 0.878   3.36
 3.07 Intr - 121005 120805  201  0  0   92   84   171 0.980  16.58
 3.06 Intr - 127140 127019  122  1  2   80   64    46 0.750   1.61
 3.05 Intr - 137147 137070   78  0  0   88  110    55 0.971   7.22
 3.04 Intr - 160309 160225   85  1  1  131  116    54 0.978  11.89
 3.03 Intr - 175060 174922  139  0  1  105   92   270 0.134  29.57
 3.02 Intr - 204858 204731  128  0  2   89   29    81 0.022   1.78
 3.01 Init - 205030 204992   39  1  0   85  105    25 0.782   2.35

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  18369  18417   49  2  1   83   58    48 0.913   0.41
S.002 Term - 103576 103419  158  2  2  100   48   133 0.806   8.60
S.003 Term - 173684 173595   90  2  0  111   42    47 0.824   0.12
S.004 Term - 204858 204727  132  0  0   89   47    86 0.924   2.69


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:38081977_38291029|GENSCAN_predicted_peptide_1|763_aa
XIHATGFNYQNEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRY
AAVTQFENVIDRKPYPDDENLVEVKFARTPVTSTYLVAFVVGEYDFVETRSKDGVCVCVY
TPVGKAEQGKFALEEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELD
ALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKVETIQPAGAGVSPFHG
IGGQQDSLSRSHCTQVLGKMPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIW
EPGESGSGVLRSRRVRMDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNN
NVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPM
NIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYG
TKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAA
RAPAAIGAHEWADQAQISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGP
WARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGK
TLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNA
IVNARRRKLTVRPGFSRVARLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r:38081977_38291029|GENSCAN_predicted_CDS_1|2292_bp
naaatacatgctacaggatttaactatcagaatgaagatgaaaaagtcaccttgtctttc
cctagtactctgcaaacaggtacaggaaccttaaagatagattttgttggagagctgaat
gacaaaatgaaaggtttctatagaagtaagtatactaccccttctggagaggtgcgctat
gctgctgtaacacagtttgagaatgtaattgaccggaaaccataccctgatgatgaaaat
ttagtggaagtgaagtttgcccgcacacctgttacatctacatatctggtggcatttgtt
gtgggtgaatatgactttgtagaaacaaggtcaaaagatggtgtgtgtgtctgtgtttac
actcctgttggcaaagcagaacaaggaaaatttgcattagaggaatggtggactcatctt
tggttaaatgaaggttttgcatcctggattgaatatctgtgtgtagaccactgcttccca
gagtatgatatttggactcagtttgtttctgctgattacacccgtgcccaggagcttgac
gccttagataacagccatcctattgaagtcagtgtgggccatccatctgaggttgatgag
atatttgatgctatatcatatagcaaaggtgcatctgtcatccgaatgctgcatgactac
attggggataaggtggaaaccattcaacctgctggggccggtgtgtccccatttcatggc
attgggggacaacaggattctctgtctaggtcccactgtactcaagtccttgggaagatg
cccacccctgcttgggacttgagactccagagactggagcagctgtgggccactgggtct
ggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatctgg
gagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtggta
gaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaaaag
ggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaacaac
aacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgggag
gcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctgggagac
tgggagaaatacaaaagcagcagaaagctcatagatcaagcgtacaagggaatgcccatg
aacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatgaagttgaaaaac
cccggaagataccagatcatgaaggagaagggcaagaagtcatctgagcacatccagcgc
atcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatacgga
accaagcagcgggaactactccacatcctcctggcatatgaggagtacaacccggaggtg
ggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgaggag
gatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggctgcc
cgggctcctgctgccatcggtgcccacgaatgggccgaccaagcccagatctctctcggg
ctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgctgatgccgata
acaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggcccg
tgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtgctc
aagcatcttagggcctctatgaagaaactaacaagaaagaagggggacctgccaccccca
gccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcgggaag
accctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcggccc
atttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggggct
gtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaacgcc
attgttaatgcacggaggaggaagctgactgttagacctgggttttccagggttgcacgg
cttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccaggatgg
aatgagctgtga

>gi568815581r:38081977_38291029|GENSCAN_predicted_peptide_2|44_aa
MAVCEMFHVRGKQHIQIPKLYTSSVTRHLHHFRLMQDSQPLDLS

>gi568815581r:38081977_38291029|GENSCAN_predicted_CDS_2|135_bp
atggcagtctgtgagatgtttcatgtccgaggcaaacagcacattcagatccccaagctc
tacacctccagtgtgaccaggcacctgcaccacttcaggctcatgcaggactcacagcct
ttggacctcagctaa

>gi568815581r:38081977_38291029|GENSCAN_predicted_peptide_3|893_aa
MSFCPFPILISLESLLGWNVPSVSETEQKFGKGGGTAVSRACVSADTLQLLQGKPGLGLA
AMPEKRPFERLPADVSPINCSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADIDII
TASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYRSK
YTTPSGEVPYAAVTQFENVIDRKPYPDDENLVEVKFARTPVTSTYLVAFVVGEYDFVETR
SKDGVCVCVYTPVGKAEQGKFALEEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVS
ADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKVETIQP
AGASVSPFHGIGGQQDSLSRSHCTQVLGKMPTPAWDLRLQRLEQLWATGSGPFFPGGGGG
MGVTQPASIWEPGESGSGVLRSRRVRMDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDK
GPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKL
IDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLR
KHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLL
ASERHSLQAARAPAAIGAHERADQAQISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQK
RLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSAS
RPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGT
QACRKAGVNAIVNARRRKLTVRPGFSRVARLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r:38081977_38291029|GENSCAN_predicted_CDS_3|2682_bp
atgtcgttctgcccttttcccatcctgatttctctggagtcacttctggggtggaatgtg
ccatctgtttctgaaactgagcagaagtttgggaaagggggagggacagccgtgtccagg
gcttgcgtgtcagcagacacgttacagctgctgcagggcaaaccaggcctgggcctcgcc
gcgatgccggagaagaggcccttcgagcggctgcctgccgatgtctcccccatcaactgc
agcctttgcctcaagcccgacttgctggacttcaccttcgagggcaagctggaggccgcc
gcccaggtgaggcaggcgactaatcagattgtgatgaattgtgctgatattgatattatt
acagcttcatatgcaccagaaggagatgaagaaatacatgctacaggatttaactatcag
aatgaagatgaaaaagtcaccttgtctttccctagtactctgcaaacaggtacaggaacc
ttaaagatagattttgttggagagctgaatgacaaaatgaaaggtttctatagaagtaag
tatactaccccttctggagaggtgccctatgctgctgtaacacagtttgagaatgtaatt
gaccggaaaccataccctgatgatgaaaatttagtggaagtgaagtttgcccgcacacct
gttacatctacatatctggtggcatttgttgtgggtgaatatgactttgtagaaacaagg
tcaaaagatggtgtgtgtgtctgtgtttacactcctgttggcaaagcagaacaaggaaaa
tttgcattagaggaatggtggactcatctttggttaaatgaaggttttgcatcctggatt
gaatatctgtgtgtagaccactgcttcccagagtatgatatttggactcagtttgtttct
gctgattacacccgtgcccaggagcttgacgccttagataacagccatcctattgaagtc
agtgtgggccatccatctgaggttgatgagatatttgatgctatatcatatagcaaaggt
gcatctgtcatccgaatgctgcatgactacattggggataaggtggaaaccattcaacct
gctggggccagtgtgtccccatttcatggcattgggggacaacaggattctctgtctagg
tcccactgtactcaagtccttgggaagatgcccacccctgcttgggacttgagactccag
agactggagcagctgtgggccactgggtctggcccctttttccctgggggcggcggtgga
atgggggttacgcagccagccagcatctgggagcccggcgagagcggttcaggtgttctc
cgaagccgccgcgtacggatggacgtggtagaggtcgcgggcagttggtgggcacaagag
cgagaggacatcattatgaaatacgaaaagggacaccgagctgggctgccagaggacaag
gggcctaagccttttcgaagctacaacaacaacgtcgatcatttggggattgtacatgag
acggagctgcctcctctgactgcgcgggaggcgaagcaaattcggcgggagatcagccga
aagagcaagtgggtggatatgctgggagactgggagaaatacaaaagcagcagaaagctc
atagatcgagcgtacaagggaatgcccatgaacatccggggcccgatgtggtcagtcctc
ctgaacactgaggaaatgaagttgaaaaaccccggaagataccagatcatgaaggagaag
ggcaagaggtcatctgagcacatccagcgcatcgaccgggacgtaagcgggacattaagg
aagcatatattcttcagggatcgatacggaaccaagcagcgggaactactccacatcctc
ctggcatatgaggagtacaacccggaggtgggctactgcagggacctgagccacatcgcc
gccttgttcctcctctatcttcctgaggaggatgcattctgggcactggtgcagctgctg
gccagtgagaggcactccctgcaggctgcccgggctcctgctgccatcggtgcccacgaa
cgggccgaccaagcccagatctctctcgggctcaccctgcgcctgtgggacgtgtatctg
gtagaaggcgaacaggcgttgatgccgataacaagaatcgcctttaaggttcagcagaag
cgcctcacgaagacgtccaggtgtggcccgtgggcacgtttttgcaaccggttcgttgat
acctgggccagggatgaggacactgtgctcaagcatcttagggcctctatgaagaaacta
acaagaaagaagggggacctgccacccccagccaaacccgagcaagggtcgtcggcatcc
aggcctgtgccggcttcacgtggcgggaagaccctctgcaagggggacaggcaggcccct
ccaggcccaccagcccggttcccgcggcccatttggtcagcttccccgccacgggcacct
cgttcttccacaccctgtcctggtggggctgtccgggaagacacctaccctgtgggcact
caggcgtgccgcaaagcaggcgtcaacgccattgttaatgcacggaggaggaagctgact
gttagacctgggttttccagggttgcacggcttctgggagacggatgtgaccctgaggac
agggcacaggccagtgtaatgccaggatggaatgagctgtga