GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:17:49

Sequence gi568815581r:37987521_38167066 : 179546 bp : 45.26% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1264   1315   52  0  1  123  105    85 0.871  15.02
 1.02 Term +   4485   4498   14  1  2  115   37    10 0.410  -3.04
 1.03 PlyA +   4892   4897    6                               1.05

 2.00 Prom +  12364  12403   40                              -3.26
 2.01 Init +  17840  18009  170  1  2   86   58    92 0.737   4.16
 2.02 Intr +  18040  18112   73  1  1   90   82    60 0.941   5.01
 2.03 Intr +  18275  18360   86  1  2   81   79   118 0.945   8.82
 2.04 Intr +  19644  19683   40  0  1   80  116   -10 0.947  -0.77
 2.05 Intr +  20166  20246   81  2  0   52   92    42 0.607   0.83
 2.06 Intr +  20690  20797  108  1  0  102  101   153 0.993  18.48
 2.07 Intr +  21127  21236  110  0  2  102   82   146 0.996  14.48
 2.08 Intr +  22485  22533   49  0  1   97  117    62 0.987   8.68
 2.09 Intr +  23077  23197  121  0  1   92  110   146 0.994  17.27
 2.10 Intr +  23513  23565   53  0  2  100   38    77 0.306   2.53
 2.11 Intr +  24919  25018  100  0  1   91   89    78 0.399   7.88
 2.12 Intr +  25389  25541  153  1  0   85   80    82 0.365   7.14
 2.13 Intr +  26505  26717  213  1  0  101   49    81 0.263   4.19
 2.14 Term +  28433  28590  158  0  2   95   39   129 0.327   6.80
 2.15 PlyA +  31885  31890    6                               1.05

 3.00 Prom +  49848  49887   40                              -4.06
 3.01 Init +  55700  55702    3  1  0  113   81     0 0.640   1.80
 3.02 Term +  66107  66238  132  1  0  105   43   126 0.585   7.89
 3.03 PlyA +  67177  67182    6                               1.05

 4.15 PlyA -  67453  67448    6                               1.05
 4.14 Term -  69128  68971  158  0  2   95   39   129 0.186   6.80
 4.13 Intr -  71056  70844  213  2  0  101   49    81 0.156   4.19
 4.12 Intr -  72190  72038  153  2  0   85   80    88 0.221   7.74
 4.11 Intr -  72660  72561  100  0  1   91   89    78 0.242   7.88
 4.10 Intr -  74067  74015   53  1  2  100   38    77 0.184   2.53
 4.09 Intr -  74503  74383  121  1  1   92  110   146 0.994  17.27
 4.08 Intr -  75095  75047   49  1  1   97  117    85 0.987  10.98
 4.07 Intr -  76460  76351  110  2  2  102   82   146 0.997  14.48
 4.06 Intr -  76897  76790  108  1  0  102  101   153 0.993  18.48
 4.05 Intr -  77421  77341   81  0  0   52   92    42 0.607   0.83
 4.04 Intr -  77943  77904   40  2  1   80  116   -10 0.947  -0.77
 4.03 Intr -  79312  79227   86  1  2   81   79   118 0.945   8.82
 4.02 Intr -  79547  79475   73  1  1   90   82    60 0.941   5.01
 4.01 Init -  79747  79578  170  1  2   86   58    92 0.737   4.16
 4.00 Prom -  85223  85184   40                              -3.26

 5.00 Prom +  85512  85551   40                              -6.96
 5.01 Init +  89282  89284    3  1  0   71  101     0 0.699  -0.40
 5.02 Intr +  90742  90826   85  0  1  131  116    54 0.957  11.89
 5.03 Intr + 113883 113960   78  1  0   88  110    55 0.973   7.22
 5.04 Intr + 123881 124002  122  0  2   80   64    53 0.764   2.31
 5.05 Intr + 130020 130220  201  2  0   92   84   171 0.980  16.58
 5.06 Intr + 135280 135444  165  0  0  110   55    43 0.878   3.36
 5.07 Intr + 136519 136623  105  0  0   73   93   122 0.984  11.61
 5.08 Intr + 141670 141944  275  0  2   88   58    43 0.065  -2.36
 5.09 Intr + 141975 142047   73  0  1   90   82    60 0.932   5.01
 5.10 Intr + 142210 142295   86  0  2   81   79   118 0.944   8.82
 5.11 Intr + 143579 143618   40  2  1   80  116   -10 0.946  -0.77
 5.12 Intr + 144101 144181   81  1  0   52   92    42 0.606   0.83
 5.13 Intr + 144625 144732  108  0  0  102  101   154 0.993  18.58
 5.14 Intr + 145062 145171  110  2  2  102   82   163 0.997  16.18
 5.15 Intr + 146427 146475   49  0  1   97  117    85 0.987  10.98
 5.16 Intr + 147019 147139  121  0  1   92   44   146 0.646  10.67
 5.17 Intr + 147455 147507   53  0  2  100   38    77 0.359   2.53
 5.18 Intr + 148861 148960  100  0  1   91   89    93 0.475   9.38
 5.19 Intr + 149331 149483  153  1  0   85   80    88 0.435   7.74
 5.20 Intr + 150465 150677  213  1  0  101   49    81 0.367   4.19
 5.21 Term + 152393 152550  158  0  2   95   39   134 0.441   7.30
 5.22 PlyA + 155842 155847    6                               1.05

 6.03 PlyA - 156720 156715    6                               1.05
 6.02 Term - 158542 158522   21  1  0   62   48    22 0.012  -6.09
 6.01 Intr - 175029 174920  110  1  2   49  111   112 0.918   9.60

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  16777  16726   52  1  1  123  105    85 0.962  15.02
S.002 Init +  80810  80861   52  1  1  123  105    85 0.950  15.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:37987521_38167066|GENSCAN_predicted_peptide_1|21_aa
METKEPIVYTGSVERAPASWF

>gi568815581r:37987521_38167066|GENSCAN_predicted_CDS_1|66_bp
atggagacgaaagagccaatcgtctacacgggcagtgtagaacgggcgcctgcttcctgg
ttctag

>gi568815581r:37987521_38167066|GENSCAN_predicted_peptide_2|504_aa
MPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDV
VEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAR
EAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLK
NPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPE
VGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQISL
GLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTV
LKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPR
PIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFSRVA
RLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r:37987521_38167066|GENSCAN_predicted_CDS_2|1515_bp
atgcccacccctgcttgggacttgagactccagagactggagcagctgtgggccactggg
tctggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatc
tgggagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtg
gtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaa
aagggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaac
aacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgg
gaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctggga
gactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgccc
atgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatgaagttgaaa
aaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgagcacatccag
cgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatac
ggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtataacccggag
gtgggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgag
gaggatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggct
gcccgggctcctgctgccatcggtgcccacgaatgggccgaccaagcccagatctctctc
gggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccg
ataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggc
ccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtg
ctcaagcatcttagggcctctatgaagaaactaacaagaaagcagggggacctgccaccc
ccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcggg
aagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcgg
cccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggg
gctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaac
gccattgttaatgcacggaggaggaacctgactgttagacctgggttttccagggttgca
cggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccagga
tggaatgagctgtga

>gi568815581r:37987521_38167066|GENSCAN_predicted_peptide_3|44_aa
MAVCEMFHVRGKQHIQIPKLYTSSVTRHLHHFRLMQDSQPLDLS

>gi568815581r:37987521_38167066|GENSCAN_predicted_CDS_3|135_bp
atggcagtctgtgagatgtttcatgtccgaggcaaacagcacattcagatccccaagctc
tacacctccagtgtgaccaggcacctgcaccacttcaggctcatgcaggactcacagcct
ttggacctcagctaa

>gi568815581r:37987521_38167066|GENSCAN_predicted_peptide_4|504_aa
MPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDV
VEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAR
EAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLK
NPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPE
VGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQISL
GLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTV
LKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPR
PIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFSRVA
RLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r:37987521_38167066|GENSCAN_predicted_CDS_4|1515_bp
atgcccacccctgcttgggacttgagactccagagactggagcagctgtgggccactggg
tctggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatc
tgggagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtg
gtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaa
aagggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaac
aacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgg
gaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctggga
gactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgccc
atgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatgaagttgaaa
aaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgagcacatccag
cgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatac
ggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtacaacccggag
gtgggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgag
gaggatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggct
gcccgggctcctgctgccatcggtgcccacgaatgggccgaccaagcccagatctctctc
gggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccg
ataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggc
ccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtg
ctcaagcatcttagggcctctatgaagaaactaacaagaaagaagggggacctgccaccc
ccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcggg
aagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcgg
cccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggg
gctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaac
gccattgttaatgcacggaggaggaacctgactgttagacctgggttttccagggttgca
cggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccagga
tggaatgagctgtga

>gi568815581r:37987521_38167066|GENSCAN_predicted_peptide_5|792_aa
MVRQATNQIVMNCADIDIITASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTL
KIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFENVIDRKPYPDDENLVEVKFARTPV
TSTYLVAFVVGEYDFVETRSKDGVCVCVYTPVGKAEQGKFALEEWWTHLWLNEGFASWIE
YLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGA
SVIRMLHDYIGDKVETIQPAGAGVSPFHGIGGQQDSLSRSHCTQVLGKMPTPAWDLRLQR
LEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDVVEVAGSWWAQER
EDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRK
SKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKG
KKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAA
LFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQISLGLTLRLWDVYLV
EGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLT
RKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPR
SSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRKLTVRPGFSRVARLLGDGCDPEDR
AQASVMPGWNEL

>gi568815581r:37987521_38167066|GENSCAN_predicted_CDS_5|2379_bp
atggtgaggcaggcgactaatcagattgtgatgaattgtgctgatattgatattattaca
gcttcatatgcaccagaaggagatgaagaaatacatgctacaggatttaactatcagaat
gaagatgaaaaagtcaccttgtctttccctagtactctgcaaacaggtacaggaacctta
aagatagattttgttggagagctgaatgacaaaatgaaaggtttctatagaagtaagtat
actaccccttctggagaggtgcgctatgctgctgtaacacagtttgagaatgtaattgac
cggaaaccataccctgatgatgaaaatttagtggaagtgaagtttgcccgcacacctgtt
acatctacatatctggtggcatttgttgtgggtgaatatgactttgtagaaacaaggtca
aaagatggtgtgtgtgtctgtgtttacactcctgttggcaaagcagaacaaggaaaattt
gcattagaggaatggtggactcatctttggttaaatgaaggttttgcatcctggattgaa
tatctgtgtgtagaccactgcttcccagagtatgatatttggactcagtttgtttctgct
gattacacccgtgcccaggagcttgacgccttagataacagccatcctattgaagtcagt
gtgggccatccatctgaggttgatgagatatttgatgctatatcatatagcaaaggtgca
tctgtcatccgaatgctgcatgactacattggggataaggtggaaaccattcaacctgct
ggggccggtgtgtccccatttcatggcattgggggacaacaggattctctgtctaggtcc
cactgtactcaagtccttgggaagatgcccacccctgcttgggacttgagactccagaga
ctggagcagctgtgggccactgggtctggcccctttttccctgggggcggcggtggaatg
ggggttacgcagccagccagcatctgggagcccggcgagagcggttcaggtgttctccga
agccgccgcgtacggatggacgtggtagaggtcgcgggcagttggtgggcacaagagcga
gaggacatcattatgaaatacgaaaagggacaccgagctgggctgccagaggacaagggg
cctaagccttttcgaagctacaacaacaacgtcgatcatttggggattgtacatgagacg
gagctgcctcctctgactgcgcgggaggcgaagcaaattcggcgggagatcagccgaaag
agcaagtgggtggatatgctgggagactgggagaaatacaaaagcagcagaaagctcata
gatcaagcgtacaagggaatgcccatgaacatccggggcccgatgtggtcagtcctcctg
aacactgaggaaatgaagttgaaaaaccccggaagataccagatcatgaaggagaagggc
aagaagtcatctgagcacatccagcgcatcgaccgggacgtaagcgggacattaaggaag
catatattcttcagggatcgatacggaaccaagcagcgggaactactccacatcctcctg
gcatatgaggagtacaacccggaggtgggctactgcagggacctgagccacatcgccgcc
ttgttcctcctctatcttcctgaggaggatgcattctgggcactggtgcagctgctggcc
agtgagaggcactccctgcaggctgcccgggctcctgctgccatcggtgcccacgaatgg
gccgaccaagcccagatctctctcgggctcaccctgcgcctgtgggacgtgtatctggta
gaaggcgaacaggcgctgatgccgataacaagaatcgcctttaaggttcagcagaagcgc
ctcacgaagacgtccaggtgtggcccgtgggcacgtttttgcaaccggttcgttgatacc
tgggccagggatgaggacactgtgctcaagcatcttagggcctctatgaagaaactaaca
agaaagaagggggacctgccacccccagccaaacccgagcaagggtcgtcggcatccagg
cctgtgccggcttcacgtggcgggaagaccctctgcaagggggacaggcaggcccctcca
ggcccaccagcccggttcccgcggcccatttggtcagcttccccgccacgggcacctcgt
tcttccacaccctgtcctggtggggctgtccgggaagacacctaccctgtgggcactcag
gcgtgccgcaaagcaggcgtcaacgccattgttaatgcacggaggaggaagctgactgtt
agacctgggttttccagggttgcacggcttctgggagacggatgtgaccctgaggacagg
gcacaggccagtgtaatgccaggatggaatgagctgtga

>gi568815581r:37987521_38167066|GENSCAN_predicted_peptide_6|43_aa
XQSEEDVSQFDSKFTRQTPVDSPDDTTLSESANQVFLVYIQKK

>gi568815581r:37987521_38167066|GENSCAN_predicted_CDS_6|132_bp
nagcaatctgaagaggatgtaagtcagtttgattccaagtttacacgtcagacacctgtc
gacagcccagatgacacaactctcagtgaaagtgccaatcaggtgtttttggtttatatc
caaaagaagtga