GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:17:51

Sequence gi568815581r_36437982 : 152450 bp : 46.90% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom + 1475431 1475470   40                              -2.46
 1.01 Init + 1487818 1487987  170  0  2   86   58    92 0.739   4.16
 1.02 Intr + 1488018 1488090   73  0  1   90   82    60 0.941   5.01
 1.03 Intr + 1488253 1488338   86  0  2   81   79   118 0.945   8.82
 1.04 Intr + 1489622 1489661   40  2  1   80  116   -10 0.947  -0.77
 1.05 Intr + 1490144 1490224   81  1  0   52   92    42 0.607   0.83
 1.06 Intr + 1490668 1490775  108  0  0  102  101   162 0.993  19.38
 1.07 Intr + 1491105 1491214  110  2  2  102   82   163 0.996  16.18
 1.08 Intr + 1492469 1492517   49  2  1   97  117    62 0.987   8.68
 1.09 Intr + 1493061 1493181  121  2  1   92  110   146 0.994  17.27
 1.10 Intr + 1493497 1493549   53  2  2  100   38    77 0.425   2.53
 1.11 Intr + 1494903 1495002  100  2  1   91   89    78 0.553   7.88
 1.12 Intr + 1495373 1495525  153  0  0   85   80    88 0.507   7.74
 1.13 Intr + 1496507 1496719  213  0  0  101   49    81 0.419   4.19
 1.14 Term + 1498435 1498592  158  2  2   95   39   134 0.503   7.30
 1.15 PlyA + 1501884 1501889    6                               1.05

 2.00 Prom + 1519861 1519900   40                              -4.06
 2.01 Init + 1525714 1525716    3  0  0  113   81     0 0.648   1.80
 2.02 Intr + 1528239 1528328   90  2  0  110    0    65 0.058   0.09
 2.03 Term + 1536108 1536239  132  2  0  105   43   126 0.732   7.89
 2.04 PlyA + 1537178 1537183    6                               1.05

 3.15 PlyA - 1537454 1537449    6                               1.05
 3.14 Term - 1539129 1538972  158  1  2   95   39   129 0.098   6.80
 3.13 Intr - 1541057 1540845  213  0  0  101   49    81 0.082   4.19
 3.12 Intr - 1542191 1542039  153  0  0   85   80    74 0.107   6.34
 3.11 Intr - 1542661 1542562  100  1  1   91   89    78 0.118   7.88
 3.10 Intr - 1544067 1544015   53  1  2  100   38    82 0.094   3.03
 3.09 Intr - 1544503 1544383  121  1  1   92  110   146 0.994  17.27
 3.08 Intr - 1545095 1545047   49  1  1   97  117    62 0.987   8.68
 3.07 Intr - 1546453 1546344  110  1  2  102   82   146 0.996  14.48
 3.06 Intr - 1546890 1546783  108  0  0  102  101   153 0.993  18.48
 3.05 Intr - 1547414 1547334   81  2  0   52   92    42 0.607   0.83
 3.04 Intr - 1547936 1547897   40  1  1   80  116   -10 0.947  -0.77
 3.03 Intr - 1549305 1549220   86  0  2   81   79   118 0.945   8.82
 3.02 Intr - 1549540 1549468   73  0  1   90   82    60 0.941   5.01
 3.01 Init - 1549740 1549571  170  0  2   86   58    92 0.738   4.16
 3.00 Prom - 1555216 1555177   40                              -3.26

 4.00 Prom + 1561903 1561942   40                              -3.26
 4.01 Init + 1567379 1567548  170  1  2   86   58    92 0.737   4.16
 4.02 Intr + 1567579 1567651   73  1  1   90   82    60 0.941   5.01
 4.03 Intr + 1567814 1567899   86  1  2   81   79   118 0.945   8.82
 4.04 Intr + 1569183 1569222   40  0  1   80  116   -10 0.947  -0.77
 4.05 Intr + 1569705 1569785   81  2  0   52   92    42 0.607   0.83
 4.06 Intr + 1570229 1570336  108  1  0  102  101   153 0.993  18.48
 4.07 Intr + 1570666 1570775  110  0  2  102   82   146 0.996  14.48
 4.08 Intr + 1572024 1572072   49  0  1   97  117    62 0.987   8.68
 4.09 Intr + 1572616 1572736  121  0  1   92  110   146 0.994  17.27
 4.10 Intr + 1573052 1573104   53  0  2  100   38    77 0.306   2.53
 4.11 Intr + 1574458 1574557  100  0  1   91   89    78 0.398   7.88
 4.12 Intr + 1574928 1575080  153  1  0   85   80    82 0.364   7.14
 4.13 Intr + 1576044 1576256  213  1  0  101   49    81 0.262   4.19
 4.14 Term + 1577972 1578129  158  0  2   95   39   129 0.326   6.80
 4.15 PlyA + 1581424 1581429    6                               1.05

 5.00 Prom + 1599387 1599426   40                              -4.06
 5.01 Init + 1605239 1605241    3  1  0  113   81     0 0.636   1.80
 5.02 Term + 1615646 1615777  132  1  0  105   43   126 0.678   7.89
 5.03 PlyA + 1616716 1616721    6                               1.05

 6.02 PlyA - 1616992 1616987    6                               1.05
 6.01 Term - 1618667 1618510  158  0  2   95   39   129 0.907   6.80

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 1483620 1483482  139  1  1   70   59   125 0.804   7.32
S.002 Intr - 1484341 1484309   33  2  0   80  110    35 0.885   3.09
S.003 Init - 1486755 1486704   52  0  1  123  105    85 0.999  15.02
S.004 Term - 1544067 1543910  158  1  2  100   48   133 0.883   8.60
S.005 Init + 1550803 1550854   52  0  1  123  105    85 0.968  15.02
S.006 Init - 1566316 1566265   52  1  1  123  105    85 0.962  15.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r_36437982|GENSCAN_predicted_peptide_1|504_aa
MPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDV
VEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAR
EAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLK
NPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPE
VGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQISL
GLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTV
LKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPR
PIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRKLTVRPGFSRVA
RLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r_36437982|GENSCAN_predicted_CDS_1|1515_bp
atgcccacccctgcttgggacttgagactccagagactggagcagctgtgggccactggg
tctggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatc
tgggagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtg
gtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaa
aagggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaac
aacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgg
gaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctggga
gactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgccc
atgaacatccggggcccgatgtggtcagtcctcctgaacattgaggaaatgaagttgaaa
aaccccggaagataccagatcatgaaggagaagggcaagaagtcatctgagcacatccag
cgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatac
ggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtataacccggag
gtgggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgag
gaggatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggct
gcccgggctcctgctgccatcggtgcccacgaatgggccgaccaagcccagatctctctc
gggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccg
ataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggc
ccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtg
ctcaagcatcttagggcctctatgaagaaactaacaagaaagaagggggacctgccaccc
ccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcggg
aagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcgg
cccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggg
gctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaac
gccattgttaatgcacggaggaggaagctgactgttagacctgggttttccagggttgca
cggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccagga
tggaatgagctgtga

>gi568815581r_36437982|GENSCAN_predicted_peptide_2|74_aa
MVETELKLICGDVLDVLDKHLIPAATTGKSKAVCEMFHVRGKQHIQIPKLYTSSVTRHLH
HFRLMQDSQPLDLS

>gi568815581r_36437982|GENSCAN_predicted_CDS_2|225_bp
atggttgagactgagctaaagttaatctgtggcgacgttctggatgtactggacaaacac
ctcattccagcagctacaactggcaagtccaaggcagtctgtgagatgtttcatgtccga
ggcaaacagcacattcagatccccaagctctacacctccagtgtgaccaggcacctgcac
cacttcaggctcatgcaggactcacagcctttggacctcagctaa

>gi568815581r_36437982|GENSCAN_predicted_peptide_3|504_aa
MPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDV
VEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAR
EAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLK
NPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPE
VGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHERADQAQISL
GLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTV
LKHLRASMKKLTRKQGDLQPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPR
PIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFSRVA
RLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r_36437982|GENSCAN_predicted_CDS_3|1515_bp
atgcccacccctgcttgggacttgagactccagagactggagcagctgtgggccactggg
tctggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatc
tgggagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtg
gtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaa
aagggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaac
aacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgg
gaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctggga
gactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgccc
atgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatgaagttgaaa
aaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgagcacatccag
cgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatac
ggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtataacccggag
gtgggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgag
gaggatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggct
gcccgggctcctgctgccatcggtgcccacgaacgggccgaccaagcccagatctctctc
gggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccg
ataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggc
ccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtg
ctcaagcatcttagggcctctatgaagaaactaacaagaaagcagggggacctgcaaccc
ccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcggg
aagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcgg
cccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggg
gctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaac
gccattgttaatgcacggaggaggaacctgactgttagacctgggttttccagggttgca
cggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccagga
tggaatgagctgtga

>gi568815581r_36437982|GENSCAN_predicted_peptide_4|504_aa
MPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDV
VEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAR
EAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLK
NPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPE
VGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQISL
GLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTV
LKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPR
PIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFSRVA
RLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r_36437982|GENSCAN_predicted_CDS_4|1515_bp
atgcccacccctgcttgggacttgagactccagagactggagcagctgtgggccactggg
tctggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatc
tgggagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtg
gtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaa
aagggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaac
aacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgg
gaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctggga
gactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgccc
atgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatgaagttgaaa
aaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgagcacatccag
cgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatac
ggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtataacccggag
gtgggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgag
gaggatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggct
gcccgggctcctgctgccatcggtgcccacgaatgggccgaccaagcccagatctctctc
gggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccg
ataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggc
ccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtg
ctcaagcatcttagggcctctatgaagaaactaacaagaaagcagggggacctgccaccc
ccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcggg
aagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcgg
cccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggg
gctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaac
gccattgttaatgcacggaggaggaacctgactgttagacctgggttttccagggttgca
cggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccagga
tggaatgagctgtga

>gi568815581r_36437982|GENSCAN_predicted_peptide_5|44_aa
MAVCEMFHVRGKQHIQIPKLYTSSVTRHLHHFRLMQDSQPLDLS

>gi568815581r_36437982|GENSCAN_predicted_CDS_5|135_bp
atggcagtctgtgagatgtttcatgtccgaggcaaacagcacattcagatccccaagctc
tacacctccagtgtgaccaggcacctgcaccacttcaggctcatgcaggactcacagcct
ttggacctcagctaa

>gi568815581r_36437982|GENSCAN_predicted_peptide_6|52_aa
XCRKAGVNAIVNARRRNLTVRPGFSRVARLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r_36437982|GENSCAN_predicted_CDS_6|159_bp
ncgtgccgcaaagcaggcgtcaacgccattgttaatgcacggaggaggaacctgactgtt
agacctgggttttccagggttgcacggcttctgggagacggatgtgaccctgaggacagg
gcacaggccagtgtaatgccaggatggaatgagctgtga