GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:17:55

Sequence gi568815581r:36277849_36428929 : 151081 bp : 44.90% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  19461  19538   78  1  0   88  110    55 0.967   7.22
 1.02 Intr +  29449  29570  122  2  2   80   64    50 0.734   2.01
 1.03 Intr +  35589  35789  201  2  0   92   84   171 0.941  16.58
 1.04 Intr +  42108  42212  105  2  0   73   93   108 0.803  10.21
 1.05 Intr +  47798  47883   86  1  2   81   79   118 0.909   8.82
 1.06 Intr +  49167  49206   40  0  1   80  116   -10 0.919  -0.77
 1.07 Intr +  49689  49769   81  2  0   52   92    42 0.589   0.83
 1.08 Intr +  50213  50320  108  1  0  102  101   162 0.993  19.38
 1.09 Intr +  50650  50759  110  0  2  102   82   150 0.999  14.88
 1.10 Intr +  52008  52056   49  0  1   97  117    62 0.988   8.68
 1.11 Intr +  52600  52720  121  0  1   92  110   146 0.994  17.27
 1.12 Intr +  53036  53088   53  0  2  100   38    77 0.355   2.53
 1.13 Intr +  54442  54541  100  0  1   91   89    78 0.429   7.88
 1.14 Intr +  54912  55064  153  1  0   85   80    82 0.436   7.14
 1.15 Intr +  56028  56240  213  1  0  101   49    81 0.305   4.19
 1.16 Term +  57956  58113  158  0  2   95   39   129 0.375   6.80
 1.17 PlyA +  61413  61418    6                               1.05

 2.00 Prom +  79376  79415   40                              -4.06
 2.01 Init +  85218  85220    3  2  0  113   81     0 0.577   1.80
 2.02 Term +  95617  95748  132  0  0  105   43   126 0.556   7.89
 2.03 PlyA +  96687  96692    6                               1.05

 3.14 PlyA -  96963  96958    6                               1.05
 3.13 Term -  98638  98481  158  2  2   95   39   129 0.048   6.80
 3.12 Intr - 100566 100354  213  1  0  101   49    81 0.041   4.19
 3.11 Intr - 101700 101548  153  1  0   85   80    82 0.058   7.14
 3.10 Intr - 102170 102071  100  2  1   91   89    78 0.062   7.88
 3.09 Intr - 103576 103524   53  2  2  100   38    77 0.048   2.53
 3.08 Intr - 104012 103892  121  2  1   92  110   146 0.994  17.27
 3.07 Intr - 104604 104556   49  2  1   97  117    62 0.988   8.68
 3.06 Intr - 105962 105853  110  2  2  102   82   150 0.999  14.88
 3.05 Intr - 106399 106292  108  1  0  102  101   153 0.993  18.48
 3.04 Intr - 106923 106843   81  0  0   52   92    42 0.605   0.83
 3.03 Intr - 107445 107406   40  2  1   80  116   -10 0.949  -0.77
 3.02 Intr - 108813 108728   86  0  2   81   79   118 0.907   8.82
 3.01 Init - 109047 108976   72  0  0   71   82    55 0.670   4.27
 3.00 Prom - 109640 109601   40                             -14.47

 4.00 Prom + 109866 109905   40                             -14.86
 4.01 Init + 110311 110362   52  0  1  123  105    85 0.998  15.02
 4.02 Intr + 112725 112757   33  1  0   80  110    35 0.887   3.09
 4.03 Intr + 113444 113582  139  0  1   70   59   112 0.801   6.02
 4.04 Intr + 116751 116819   69  0  0   87  102    28 0.272   2.40
 4.05 Intr + 141431 141446   16  2  1  138   55     2 0.040  -2.55
 4.06 Term + 146698 146829  132  0  0  105   43   126 0.574   7.89
 4.07 PlyA + 147768 147773    6                               1.05

 5.02 PlyA - 148044 148039    6                               1.05
 5.01 Term - 149719 149562  158  2  2   95   39   133 0.949   7.20

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  18402  18450   49  2  1   83   58    48 0.912   0.41
S.002 Term - 103576 103419  158  2  2  100   48   128 0.937   8.10


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:36277849_36428929|GENSCAN_predicted_peptide_1|592_aa
XIHATGFNYQNEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRY
AAVTQFENVIDRKPYPDDENLVEVKFARTPVTSTYLVAFVVGEYDFVETRSKDGVCVCVY
TPVGKAEQGKFALEVSVGHPSEVDEICDAISYSKGASVIRMLHDYIGDKGHRAGLPEDKG
PKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLI
DRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRK
HMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLA
SERHSLQAARAPAAIGAHEWADQAQISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKR
LTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASR
PVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQ
ACRKAGVNAIVNARRRNLTVRPGFSRVARLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r:36277849_36428929|GENSCAN_predicted_CDS_1|1779_bp
naaatacatgctacaggatttaactatcagaatgaagatgaaaaagtcaccttgtctttc
cctagtactctgcaaacaggtacgggaaccttaaagatagattttgttggagagctgaat
gacaaaatgaaaggtttctatagaagtaagtatactaccccttctggagaggtgcgctat
gctgctgtaacacagtttgagaatgtaattgaccggaaaccataccctgatgatgaaaat
ttagtggaagtgaagtttgcccgcacacctgttacatctacatatctggtggcatttgtt
gtgggtgaatatgactttgtagaaacaaggtcaaaagatggtgtgtgtgtctgtgtttac
actcctgttggcaaagcagaacaaggaaaatttgcattagaggtcagtgtgggccatcca
tctgaggttgatgagatatgtgatgctatatcatatagcaaaggtgcatctgtcatccga
atgctgcatgactacattggggataagggacaccgagctgggctgccagaggacaagggg
cctaagccttttcgaagctacaacaacaacgtcgatcatttggggattgtacatgagacg
gagctgcctcctctgactgcgcgggaggcgaagcaaattcggcgggagatcagccgaaag
agcaagtgggtggatatgctgggagactgggagaaatacaaaagcagcagaaagctcata
gatcgagcgtacaagggaatgcccatgaacatccggggcccgatgtggtcagtcctcctg
aacattgaggaaatgaagttgaaaaaccccggaagataccagatcatgaaggagaagggc
aagaggtcatctgagcacatccagcgcatcgaccgggacataagcgggacattaaggaag
catatgttcttcagggatcgatacggaaccaagcagcgggaactactccacatcctcctg
gcatatgaggagtataacccggaggtgggctactgcagggacctgagccacatcgccgcc
ttgttcctcctctatcttcctgaggaggatgcattctgggcactggtgcagctgctggcc
agtgagaggcactccctgcaggctgcccgggctcctgctgccatcggtgcccacgaatgg
gccgaccaagcccagatctctctcgggctcaccctgcgcctgtgggacgtgtatctggta
gaaggcgaacaggcgttgatgccgataacaagaatcgcctttaaggttcagcagaagcgc
ctcacgaagacgtccaggtgtggcccgtgggcacgtttttgcaaccggttcgttgatacc
tgggccagggatgaggacactgtgctcaagcatcttagggcctctatgaagaaactaaca
agaaagcagggggacctgccacccccagccaaacccgagcaagggtcgtcggcatccagg
cctgtgccggcttcacgtggcgggaagaccctctgcaagggggacaggcaggcccctcca
ggcccaccagcccggttcccgcggcccatttggtcagcttccccgccacgggcacctcgt
tcttccacaccctgtcctggtggggctgtccgggaagacacctaccctgtgggcactcag
gcgtgccgcaaagcaggcgtcaacgccattgttaatgcacggaggaggaacctgactgtt
agacctgggttttccagggttgcacggcttctgggagacggatgtgaccctgaggacagg
gcacaggccagtgtaatgccaggatggaatgagctgtga

>gi568815581r:36277849_36428929|GENSCAN_predicted_peptide_2|44_aa
MAVCEMFHVRGKQHIQIPKLYTSSVTRHLHHFRLMQDSQPLDLS

>gi568815581r:36277849_36428929|GENSCAN_predicted_CDS_2|135_bp
atggcagtctgtgagatgtttcatgtccgaggcaaacagcacattcagatccccaagctc
tacacctccagtgtgaccaggcacctgcaccacttcaggctcatgcaggactcacagcct
ttggacctcagctaa

>gi568815581r:36277849_36428929|GENSCAN_predicted_peptide_3|447_aa
MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPL
TAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEM
KLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEY
NPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQ
ISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDE
DTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPAR
FPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFS
RVARLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r:36277849_36428929|GENSCAN_predicted_CDS_3|1344_bp
atggacgtggtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatg
aaatacgaaaagggacaccgagctgggctgccagaggacaaggggcctaagccttttcga
agctacaacaacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctg
actgcgcgggaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggat
atgctgggagactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaag
ggaatgcccatgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatg
aagttgaaaaaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgag
cacatccagcgcatcgaccgggacataagcgggacattaaggaagcatatgttcttcagg
gatcgatacggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtat
aacccggaggtgggctactgcagggacctgagccacatcgccgccttgttcctcctctat
cttcctgaggaggatgcattctgggcactggtgcagctgctggccagtgagaggcactcc
ctgcaggctgcccgggctcctgctgccatcggtgcccacgaatgggccgaccaagcccag
atctctctcgggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcg
ttgatgccgataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtcc
aggtgtggcccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgag
gacactgtgctcaagcatcttagggcctctatgaagaaactaacaagaaagcagggggac
ctgccacccccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttca
cgtggcgggaagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccgg
ttcccgcggcccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgt
cctggtggggctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagca
ggcgtcaacgccattgttaatgcacggaggaggaacctgactgttagacctgggttttcc
agggttgcacggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgta
atgccaggatggaatgagctgtga

>gi568815581r:36277849_36428929|GENSCAN_predicted_peptide_4|146_aa
METKEPIVYTGSVERAPGPFGALATSSPDHTMEAGSPVGTTRASCDLQFLLPGVWGAHSG
EQGIPHTPHFEDAGRGWNICPEKANTSIGHVSLSPFATPLVMYAVCEMFHVRGKQHIQIP
KLYTSSVTRHLHHFRLMQDSQPLDLS

>gi568815581r:36277849_36428929|GENSCAN_predicted_CDS_4|441_bp
atggagacgaaagagccaatcgtctacacgggcagtgtagaacgggcgcctgggcctttt
ggagccctggccacgtcctccccagatcacacgatggaagctggcagccccgtgggcacc
actcgagccagctgtgacctgcagtttctgcttcctggagtgtggggcgcccactcagga
gagcagggcataccccacacccctcattttgaggatgctgggaggggatggaatatttgt
cctgagaaggccaatacatccatcggacacgtgtctctatccccatttgctacgcctttg
gttatgtatgcagtctgtgagatgtttcatgtccgaggcaaacagcacattcagatcccc
aagctctacacctccagtgtgaccaggcacctgcaccacttcaggctcatgcaggactca
cagcctttggacctcagctaa

>gi568815581r:36277849_36428929|GENSCAN_predicted_peptide_5|52_aa
XCRKAGVNAIVNARRRNLTVRPGFSRVARLLGDGCDPEDRAQASVMPGWDEL

>gi568815581r:36277849_36428929|GENSCAN_predicted_CDS_5|159_bp
ncgtgccgcaaagcaggcgtcaacgccattgttaatgcacggaggaggaacctgactgtt
agacctgggttttccagggttgcacggcttctgggagacggatgtgaccctgaggacagg
gcacaggccagtgtaatgccaggatgggatgagctgtga