GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:17:53

Sequence gi568815581r:36175051_36362985 : 187935 bp : 45.01% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1264   1315   52  0  1  123  105    85 0.887  15.02
 1.02 Intr +   3680   3712   33  0  0   80   82    35 0.546   0.29
 1.03 Intr +   4401   4539  139  1  1   70   59   125 0.809   7.32
 1.04 Intr +   7404   7528  125  0  2   94   84    22 0.735   2.63
 1.05 Intr +   7582   7926  345  2  0   29   59   283 0.436  14.86
 1.06 Term +  12105  12208  104  1  2   54   42    75 0.212  -2.06
 1.07 PlyA +  13581  13586    6                               1.05

 2.04 PlyA -  18967  18962    6                               1.05
 2.03 Term -  20326  20236   91  0  1  128   55    78 0.976   5.69
 2.02 Intr -  20862  20748  115  1  1  126  103   111 0.999  15.91
 2.01 Init -  21623  21548   76  2  1   82   94   103 0.940   9.66
 2.00 Prom -  34956  34917   40                              -0.66

 3.00 Prom +  35526  35565   40                              -7.66
 3.01 Init +  36092  36167   76  1  1   68  108    73 0.943   6.59
 3.02 Intr +  44713  44889  177  2  0   51   58    85 0.166   1.69
 3.03 Intr +  45230  45492  263  0  2   69   77   138 0.359   8.01
 3.04 Intr +  66649  66738   90  0  0  110    0    65 0.075   0.09
 3.05 Term +  74523  74654  132  2  0  105   43   163 0.842  11.59
 3.06 PlyA +  75593  75598    6                               1.05

 4.14 PlyA -  75869  75864    6                               1.05
 4.13 Term -  77544  77387  158  1  2   95   39    96 0.006   3.50
 4.12 Intr -  79472  79260  213  0  0  101   49    81 0.005   4.19
 4.11 Intr -  80587  80435  153  2  0   85   80    82 0.020   7.14
 4.10 Intr -  81057  80958  100  0  1   91   89    78 0.022   7.88
 4.09 Intr -  82463  82411   53  0  2  100   38    72 0.016   2.03
 4.08 Intr -  82899  82779  121  0  1   92  110   146 0.994  17.27
 4.07 Intr -  83491  83443   49  0  1   97  117    62 0.987   8.68
 4.06 Intr -  84849  84740  110  0  2  102   82   146 0.996  14.48
 4.05 Intr -  85286  85179  108  2  0   99  101   160 0.975  18.88
 4.04 Intr -  85810  85730   81  1  0   52   92    42 0.602   0.83
 4.03 Intr -  86332  86293   40  0  1   80  116   -10 0.939  -0.77
 4.02 Intr -  87701  87616   86  2  2   81   79   118 0.923   8.82
 4.01 Init -  87935  87864   72  2  0   71   82    55 0.663   4.27
 4.00 Prom -  93611  93572   40                              -3.26

 5.00 Prom +  93900  93939   40                              -6.96
 5.01 Init +  97689  97691    3  2  0   71  101     0 0.685  -0.40
 5.02 Intr +  99149  99233   85  1  1  131  116    54 0.961  11.89
 5.03 Intr + 122259 122336   78  1  0   88  110    55 0.971   7.22
 5.04 Intr + 132247 132368  122  2  2   80   64    50 0.736   2.01
 5.05 Intr + 138387 138587  201  2  0   92   84   171 0.941  16.58
 5.06 Intr + 144906 145010  105  2  0   73   93   108 0.803  10.21
 5.07 Intr + 150596 150681   86  1  2   81   79   118 0.909   8.82
 5.08 Intr + 151965 152004   40  0  1   80  116   -10 0.919  -0.77
 5.09 Intr + 152487 152567   81  2  0   52   92    42 0.589   0.83
 5.10 Intr + 153011 153118  108  1  0  102  101   162 0.993  19.38
 5.11 Intr + 153448 153557  110  0  2  102   82   150 0.999  14.88
 5.12 Intr + 154806 154854   49  0  1   97  117    62 0.988   8.68
 5.13 Intr + 155398 155518  121  0  1   92  110   146 0.994  17.27
 5.14 Intr + 155834 155886   53  0  2  100   38    77 0.293   2.53
 5.15 Intr + 157240 157339  100  0  1   91   89    78 0.355   7.88
 5.16 Intr + 157710 157862  153  1  0   85   80    82 0.361   7.14
 5.17 Intr + 158826 159038  213  1  0  101   49    81 0.257   4.19
 5.18 Term + 160754 160911  158  0  2   95   39   129 0.318   6.80
 5.19 PlyA + 164211 164216    6                               1.05

 6.03 PlyA - 165089 165084    6                               1.05
 6.02 Term - 174110 174096   15  2  0   69   55    14 0.085  -5.56
 6.01 Intr - 183378 183269  110  1  2   49  111   112 0.927   9.60

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  82463  82306  158  0  2  100   48   123 0.977   7.60
S.002 Init +  89199  89250   52  2  1  123  105    85 0.939  15.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:36175051_36362985|GENSCAN_predicted_peptide_1|265_aa
METKEPIVYTGSVERAPGPFGALATSSLDHTMEAGSPVGTTRASCDLQFLLPGVWGAHSG
EHGTPHTPHFEDAGRCERVDASTTCLHMCVCTCIVLAHLRVSRESGAQHVLAPAGTLSRR
RGWGPYLRSLRIQHRSSPVQPPAKPPEDEPDAEGYEWTIAVSFQLADFAPLHWLRLDGPG
FGVLSVPPHRVVAFSLGITPSRGAADPKSSMSSPRPAHRPRPRPLPRPDQRALEQCPLEK
AERSHPPCTRAAKNSHVPEYVSAAV

>gi568815581r:36175051_36362985|GENSCAN_predicted_CDS_1|798_bp
atggagacgaaagagccaatcgtctacacgggcagtgtagaacgggcgcctgggcctttt
ggagccctggccacgtcctccctggatcacacgatggaagctggcagccccgtgggcacc
actcgagccagctgtgacctgcagtttctgcttcctggagtgtggggcgcccactcagga
gagcacggcacaccccacacccctcattttgaggatgctgggaggtgtgagcgagtggat
gcttccactacgtgtctgcacatgtgtgtgtgcacttgcattgtccttgcacacctgcgt
gtgtcccgtgagagcggagcccagcatgtgctggcacctgcaggaacattgtcacgacga
cgaggatggggaccatatcttcggagcctgaggatccaacacaggtccagccctgtgcag
ccgcccgccaagccgccagaggacgagccggacgccgaaggctacgagtggacgattgca
gttagtttccaactcgccgacttcgcgcccctccactggctccggcttgatggtcccggc
ttcggggtgctctcggtccctccccatcgcgtcgtcgctttctcccttggcataaccccc
agccgcggggccgcagaccctaagagctccatgagctctccgcgccctgcccaccggccc
cggccccgacccctccccagaccggaccagagagctttggaacaatgtcctctagaaaaa
gctgaacgtagccacccaccttgtacgagagccgcaaagaatagccatgtgcctgaatat
gtgtcagccgctgtgtga

>gi568815581r:36175051_36362985|GENSCAN_predicted_peptide_2|93_aa
MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA

>gi568815581r:36175051_36362985|GENSCAN_predicted_CDS_2|282_bp
atgcaggtctccactgctgcccttgccgtcctcctctgcaccatggctctctgcaaccag
gtcctctctgcaccacttgctgctgacacgccgaccgcctgctgcttcagctacacctcc
cgacagattccacagaatttcatagctgactactttgagacgagcagccagtgctccaag
cccagtgtcatcttcctaaccaagagaggccggcaggtctgtgctgaccccagtgaggag
tgggtccagaaatacgtcagtgacctggagctgagtgcctga

>gi568815581r:36175051_36362985|GENSCAN_predicted_peptide_3|245_aa
MKLCVTVLSLLVLVAAFCSLALSAPIKLGAYGGQVINGVLAQVQLTVGPVGPWIHPVVIS
PMTECVIGIDIFNSWQNPYIGSLTGIDLANAFFSIPVHKAHQKQFAFSWQGQQYTFTVLP
HGYINSPALRHNLIQRDLDHFLLLKDITLVHYNDIMMIGSSEQKVANTLDLLVETELKLI
CGDVLDVLDKHLIPAATTGKSKAVCEMFDVRGKQHIQIPKLYTSSVTRHLHHFRLMQDSQ
PLDRS

>gi568815581r:36175051_36362985|GENSCAN_predicted_CDS_3|738_bp
atgaagctctgcgtgactgtcctgtctctcctcgtgctagtagctgccttctgctctcta
gcactctcagcaccaattaaattaggggcttatggaggtcaggtaattaatggagtttta
gctcaggtccaacttacagtgggcccagtgggtccctggattcatcctgtggtcatttcc
ccaatgacagaatgtgtaattggcatagatatattcaacagctggcagaacccctacatt
ggctccctgactggtattgacttagcaaatgcctttttctccattcctgtccataaggcc
caccagaagcaatttgccttcagctggcaaggtcagcaatatacctttactgtcctacct
cacgggtatatcaactctccagctttgcgtcataatcttattcagagagaccttgatcac
tttttgcttctgaaagatatcacactggtccattacaatgacattatgatgattggatcc
agtgagcaaaaagtagcaaacacactggacttattggttgagactgagctaaagttaatc
tgtggcgacgttctggatgtactggacaaacacctcattccagcagctacaactggcaag
tccaaggcagtctgtgagatgtttgatgtccgaggcaaacagcacattcagatccccaag
ctctacacctccagtgtgaccaggcacctgcaccacttcaggctcatgcaggactcacag
cctttggaccgcagctaa

>gi568815581r:36175051_36362985|GENSCAN_predicted_peptide_4|447_aa
MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPL
TAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEM
KMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEY
NPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAAQAPAAIGAHEWADQAQ
ISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDE
DTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPAR
FPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNSIVNARRRNLTVRPGFS
RVARLLGDGCDPEDRAQASVMPGWNEL

>gi568815581r:36175051_36362985|GENSCAN_predicted_CDS_4|1344_bp
atggacgtggtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatg
aaatacgaaaagggacaccgagctgggctgccagaggacaaggggcctaagccttttcga
agctacaacaacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctg
actgcgcgggaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggat
atgctgggagactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaag
ggaatgcccatgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatg
aagatgaaaaaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgag
cacatccagcgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagg
gatcgatacggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtat
aacccggaggtgggctactgcagggacctgagccacatcgccgccttgttcctcctctat
cttcctgaggaggatgcattctgggcactggtgcagctgctggccagtgagaggcactcc
ctgcaggctgcccaggctcctgctgccatcggtgcccacgaatgggccgaccaagcccag
atctctctcgggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcg
ttgatgccgataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtcc
aggtgtggcccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgag
gacactgtgctcaagcatcttagggcctctatgaagaaactaacaagaaagcagggggac
ctgccacccccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttca
cgtggcgggaagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccgg
ttcccgcggcccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgt
cctggtggggctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagca
ggcgtcaactccattgttaatgcacggaggaggaacctgactgttagacctgggttttcc
agggttgcacggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgta
atgccaggatggaatgagctgtga

>gi568815581r:36175051_36362985|GENSCAN_predicted_peptide_5|621_aa
MVRQATNQIVMNCADIDIITASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTL
KIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFENVIDRKPYPDDENLVEVKFARTPV
TSTYLVAFVVGEYDFVETRSKDGVCVCVYTPVGKAEQGKFALEVSVGHPSEVDEICDAIS
YSKGASVIRMLHDYIGDKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAK
QIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPG
RYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGY
CRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQISLGLT
LRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKH
LRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIW
SASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFSRVARLL
GDGCDPEDRAQASVMPGWNEL

>gi568815581r:36175051_36362985|GENSCAN_predicted_CDS_5|1866_bp
atggtgaggcaggcgactaatcagattgtgatgaattgtgctgatattgatattattaca
gcttcatatgcaccagaaggagatgaagaaatacatgctacaggatttaactatcagaat
gaagatgaaaaagtcaccttgtctttccctagtactctgcaaacaggtacgggaacctta
aagatagattttgttggagagctgaatgacaaaatgaaaggtttctatagaagtaagtat
actaccccttctggagaggtgcgctatgctgctgtaacacagtttgagaatgtaattgac
cggaaaccataccctgatgatgaaaatttagtggaagtgaagtttgcccgcacacctgtt
acatctacatatctggtggcatttgttgtgggtgaatatgactttgtagaaacaaggtca
aaagatggtgtgtgtgtctgtgtttacactcctgttggcaaagcagaacaaggaaaattt
gcattagaggtcagtgtgggccatccatctgaggttgatgagatatgtgatgctatatca
tatagcaaaggtgcatctgtcatccgaatgctgcatgactacattggggataagggacac
cgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaacaacaacgtc
gatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgggaggcgaag
caaattcggcgggagatcagccgaaagagcaagtgggtggatatgctgggagactgggag
aaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgcccatgaacatc
cggggcccgatgtggtcagtcctcctgaacattgaggaaatgaagttgaaaaaccccgga
agataccagatcatgaaggagaagggcaagaggtcatctgagcacatccagcgcatcgac
cgggacataagcgggacattaaggaagcatatgttcttcagggatcgatacggaaccaag
cagcgggaactactccacatcctcctggcatatgaggagtataacccggaggtgggctac
tgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgaggaggatgca
ttctgggcactggtgcagctgctggccagtgagaggcactccctgcaggctgcccgggct
cctgctgccatcggtgcccacgaatgggccgaccaagcccagatctctctcgggctcacc
ctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccgataacaaga
atcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggcccgtgggca
cgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtgctcaagcat
cttagggcctctatgaagaaactaacaagaaagcagggggacctgccacccccagccaaa
cccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcgggaagaccctc
tgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcggcccatttgg
tcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggggctgtccgg
gaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaacgccattgtt
aatgcacggaggaggaacctgactgttagacctgggttttccagggttgcacggcttctg
ggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccaggatggaatgag
ctgtga

>gi568815581r:36175051_36362985|GENSCAN_predicted_peptide_6|41_aa
XQSEEDVSQFDSKFTRQTPVDSPDDTTLSESANQVFLPPEL

>gi568815581r:36175051_36362985|GENSCAN_predicted_CDS_6|126_bp
nagcaatctgaagaggatgtaagtcagtttgattccaagtttacacgtcagacacctgtc
gacagcccagatgacacaactctcagtgaaagtgccaatcaggtgtttttgcctccggaa
ctgtga