GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:17:46

Sequence gi568815581f:38029496_38238550 : 209055 bp : 44.35% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  13725  13727    3  2  0  113   81     0 0.670   1.80
 1.02 Term +  24132  24263  132  2  0  105   43   126 0.585   7.89
 1.03 PlyA +  25202  25207    6                               1.05

 2.15 PlyA -  25478  25473    6                               1.05
 2.14 Term -  27153  26996  158  1  2   95   39   129 0.185   6.80
 2.13 Intr -  29081  28869  213  0  0  101   49    81 0.156   4.19
 2.12 Intr -  30215  30063  153  0  0   85   80    88 0.221   7.74
 2.11 Intr -  30685  30586  100  1  1   91   89    78 0.241   7.88
 2.10 Intr -  32092  32040   53  2  2  100   38    77 0.183   2.53
 2.09 Intr -  32528  32408  121  2  1   92  110   146 0.994  17.27
 2.08 Intr -  33120  33072   49  2  1   97  117    85 0.987  10.98
 2.07 Intr -  34485  34376  110  0  2  102   82   146 0.997  14.48
 2.06 Intr -  34922  34815  108  2  0  102  101   153 0.993  18.48
 2.05 Intr -  35446  35366   81  1  0   52   92    42 0.607   0.83
 2.04 Intr -  35968  35929   40  0  1   80  116   -10 0.947  -0.77
 2.03 Intr -  37337  37252   86  2  2   81   79   118 0.945   8.82
 2.02 Intr -  37572  37500   73  2  1   90   82    60 0.941   5.01
 2.01 Init -  37772  37603  170  2  2   86   58    92 0.737   4.16
 2.00 Prom -  43248  43209   40                              -3.26

 3.00 Prom +  43537  43576   40                              -6.96
 3.01 Init +  47307  47309    3  2  0   71  101     0 0.699  -0.40
 3.02 Intr +  48767  48851   85  1  1  131  116    54 0.957  11.89
 3.03 Intr +  71908  71985   78  2  0   88  110    55 0.973   7.22
 3.04 Intr +  81906  82027  122  1  2   80   64    53 0.764   2.31
 3.05 Intr +  88045  88245  201  0  0   92   84   171 0.980  16.58
 3.06 Intr +  93305  93469  165  1  0  110   55    43 0.878   3.36
 3.07 Intr +  94544  94648  105  1  0   73   93   122 0.984  11.61
 3.08 Intr +  99695  99969  275  1  2   88   58    43 0.065  -2.36
 3.09 Intr + 100000 100072   73  1  1   90   82    60 0.932   5.01
 3.10 Intr + 100235 100320   86  1  2   81   79   118 0.944   8.82
 3.11 Intr + 101604 101643   40  0  1   80  116   -10 0.946  -0.77
 3.12 Intr + 102126 102206   81  2  0   52   92    42 0.606   0.83
 3.13 Intr + 102650 102757  108  1  0  102  101   154 0.993  18.58
 3.14 Intr + 103087 103196  110  0  2  102   82   163 0.997  16.18
 3.15 Intr + 104452 104500   49  1  1   97  117    85 0.987  10.98
 3.16 Intr + 105044 105164  121  1  1   92   44   146 0.646  10.67
 3.17 Intr + 105480 105532   53  1  2  100   38    77 0.409   2.53
 3.18 Intr + 106886 106985  100  1  1   91   89    93 0.541   9.38
 3.19 Intr + 107356 107508  153  2  0   85   80    88 0.496   7.74
 3.20 Intr + 108490 108702  213  2  0  101   49    81 0.416   4.19
 3.21 Term + 110418 110575  158  1  2   95   39   134 0.498   7.30
 3.22 PlyA + 113867 113872    6                               1.05

 4.00 Prom + 131841 131880   40                              -4.06
 4.01 Init + 137696 137698    3  1  0  113   81     0 0.651   1.80
 4.02 Term + 148098 148229  132  2  0  105   43   126 0.594   7.89
 4.03 PlyA + 149168 149173    6                               1.05

 5.20 PlyA - 149444 149439    6                               1.05
 5.19 Term - 151119 150962  158  1  2   95   39   134 0.161   7.30
 5.18 Intr - 153047 152835  213  0  0  101   49    81 0.134   4.19
 5.17 Intr - 154181 154029  153  0  0   85   80    88 0.181   7.74
 5.16 Intr - 154651 154552  100  1  1   91   89    78 0.197   7.88
 5.15 Intr - 156057 156005   53  1  2  100   38    82 0.158   3.03
 5.14 Intr - 156493 156373  121  1  1   92  110   146 0.994  17.27
 5.13 Intr - 157085 157037   49  1  1   97  117    85 0.987  10.98
 5.12 Intr - 158448 158339  110  0  2  102   82   146 0.997  14.48
 5.11 Intr - 158885 158778  108  2  0  102  101   153 0.993  18.48
 5.10 Intr - 159409 159329   81  1  0   52   92    42 0.607   0.83
 5.09 Intr - 159931 159892   40  0  1   80  116   -10 0.947  -0.77
 5.08 Intr - 161300 161215   86  2  2   81   79   118 0.945   8.82
 5.07 Intr - 161535 161463   73  2  1   90   82    60 0.935   5.01
 5.06 Intr - 161840 161566  275  2  2   88   58    49 0.097  -1.76
 5.05 Intr - 166976 166872  105  2  0   73   93   122 0.984  11.61
 5.04 Intr - 168215 168051  165  2  0  110   55    43 0.878   3.36
 5.03 Intr - 173486 173286  201  2  0   92   84   171 0.980  16.58
 5.02 Intr - 179621 179500  122  0  2   80   64    46 0.747   1.61
 5.01 Intr - 189628 189551   78  2  0   88  110    55 0.967   7.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  38835  38886   52  2  1  123  105    85 0.950  15.02
S.002 Term - 156057 155900  158  1  2  100   48   133 0.806   8.60
S.003 Init - 190685 190637   49  2  1   83   58    48 0.909   0.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:38029496_38238550|GENSCAN_predicted_peptide_1|44_aa
MAVCEMFHVRGKQHIQIPKLYTSSVTRHLHHFRLMQDSQPLDLS

>gi568815581f:38029496_38238550|GENSCAN_predicted_CDS_1|135_bp
atggcagtctgtgagatgtttcatgtccgaggcaaacagcacattcagatccccaagctc
tacacctccagtgtgaccaggcacctgcaccacttcaggctcatgcaggactcacagcct
ttggacctcagctaa

>gi568815581f:38029496_38238550|GENSCAN_predicted_peptide_2|504_aa
MPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDV
VEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAR
EAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLK
NPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPE
VGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQISL
GLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTV
LKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPR
PIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFSRVA
RLLGDGCDPEDRAQASVMPGWNEL

>gi568815581f:38029496_38238550|GENSCAN_predicted_CDS_2|1515_bp
atgcccacccctgcttgggacttgagactccagagactggagcagctgtgggccactggg
tctggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatc
tgggagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtg
gtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaa
aagggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaac
aacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgg
gaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctggga
gactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgccc
atgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatgaagttgaaa
aaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgagcacatccag
cgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatac
ggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtacaacccggag
gtgggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgag
gaggatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggct
gcccgggctcctgctgccatcggtgcccacgaatgggccgaccaagcccagatctctctc
gggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccg
ataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggc
ccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtg
ctcaagcatcttagggcctctatgaagaaactaacaagaaagaagggggacctgccaccc
ccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcggg
aagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcgg
cccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggg
gctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaac
gccattgttaatgcacggaggaggaacctgactgttagacctgggttttccagggttgca
cggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccagga
tggaatgagctgtga

>gi568815581f:38029496_38238550|GENSCAN_predicted_peptide_3|792_aa
MVRQATNQIVMNCADIDIITASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTL
KIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFENVIDRKPYPDDENLVEVKFARTPV
TSTYLVAFVVGEYDFVETRSKDGVCVCVYTPVGKAEQGKFALEEWWTHLWLNEGFASWIE
YLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGA
SVIRMLHDYIGDKVETIQPAGAGVSPFHGIGGQQDSLSRSHCTQVLGKMPTPAWDLRLQR
LEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDVVEVAGSWWAQER
EDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRK
SKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKG
KKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAA
LFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQISLGLTLRLWDVYLV
EGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLT
RKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPR
SSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRKLTVRPGFSRVARLLGDGCDPEDR
AQASVMPGWNEL

>gi568815581f:38029496_38238550|GENSCAN_predicted_CDS_3|2379_bp
atggtgaggcaggcgactaatcagattgtgatgaattgtgctgatattgatattattaca
gcttcatatgcaccagaaggagatgaagaaatacatgctacaggatttaactatcagaat
gaagatgaaaaagtcaccttgtctttccctagtactctgcaaacaggtacaggaacctta
aagatagattttgttggagagctgaatgacaaaatgaaaggtttctatagaagtaagtat
actaccccttctggagaggtgcgctatgctgctgtaacacagtttgagaatgtaattgac
cggaaaccataccctgatgatgaaaatttagtggaagtgaagtttgcccgcacacctgtt
acatctacatatctggtggcatttgttgtgggtgaatatgactttgtagaaacaaggtca
aaagatggtgtgtgtgtctgtgtttacactcctgttggcaaagcagaacaaggaaaattt
gcattagaggaatggtggactcatctttggttaaatgaaggttttgcatcctggattgaa
tatctgtgtgtagaccactgcttcccagagtatgatatttggactcagtttgtttctgct
gattacacccgtgcccaggagcttgacgccttagataacagccatcctattgaagtcagt
gtgggccatccatctgaggttgatgagatatttgatgctatatcatatagcaaaggtgca
tctgtcatccgaatgctgcatgactacattggggataaggtggaaaccattcaacctgct
ggggccggtgtgtccccatttcatggcattgggggacaacaggattctctgtctaggtcc
cactgtactcaagtccttgggaagatgcccacccctgcttgggacttgagactccagaga
ctggagcagctgtgggccactgggtctggcccctttttccctgggggcggcggtggaatg
ggggttacgcagccagccagcatctgggagcccggcgagagcggttcaggtgttctccga
agccgccgcgtacggatggacgtggtagaggtcgcgggcagttggtgggcacaagagcga
gaggacatcattatgaaatacgaaaagggacaccgagctgggctgccagaggacaagggg
cctaagccttttcgaagctacaacaacaacgtcgatcatttggggattgtacatgagacg
gagctgcctcctctgactgcgcgggaggcgaagcaaattcggcgggagatcagccgaaag
agcaagtgggtggatatgctgggagactgggagaaatacaaaagcagcagaaagctcata
gatcaagcgtacaagggaatgcccatgaacatccggggcccgatgtggtcagtcctcctg
aacactgaggaaatgaagttgaaaaaccccggaagataccagatcatgaaggagaagggc
aagaagtcatctgagcacatccagcgcatcgaccgggacgtaagcgggacattaaggaag
catatattcttcagggatcgatacggaaccaagcagcgggaactactccacatcctcctg
gcatatgaggagtacaacccggaggtgggctactgcagggacctgagccacatcgccgcc
ttgttcctcctctatcttcctgaggaggatgcattctgggcactggtgcagctgctggcc
agtgagaggcactccctgcaggctgcccgggctcctgctgccatcggtgcccacgaatgg
gccgaccaagcccagatctctctcgggctcaccctgcgcctgtgggacgtgtatctggta
gaaggcgaacaggcgctgatgccgataacaagaatcgcctttaaggttcagcagaagcgc
ctcacgaagacgtccaggtgtggcccgtgggcacgtttttgcaaccggttcgttgatacc
tgggccagggatgaggacactgtgctcaagcatcttagggcctctatgaagaaactaaca
agaaagaagggggacctgccacccccagccaaacccgagcaagggtcgtcggcatccagg
cctgtgccggcttcacgtggcgggaagaccctctgcaagggggacaggcaggcccctcca
ggcccaccagcccggttcccgcggcccatttggtcagcttccccgccacgggcacctcgt
tcttccacaccctgtcctggtggggctgtccgggaagacacctaccctgtgggcactcag
gcgtgccgcaaagcaggcgtcaacgccattgttaatgcacggaggaggaagctgactgtt
agacctgggttttccagggttgcacggcttctgggagacggatgtgaccctgaggacagg
gcacaggccagtgtaatgccaggatggaatgagctgtga

>gi568815581f:38029496_38238550|GENSCAN_predicted_peptide_4|44_aa
MAVCEMFHVRGKQHIQIPKLYTSSVTRHLHHFRLMQDSQPLDLS

>gi568815581f:38029496_38238550|GENSCAN_predicted_CDS_4|135_bp
atggcagtctgtgagatgtttcatgtccgaggcaaacagcacattcagatccccaagctc
tacacctccagtgtgaccaggcacctgcaccacttcaggctcatgcaggactcacagcct
ttggacctcagctaa

>gi568815581f:38029496_38238550|GENSCAN_predicted_peptide_5|763_aa
XIHATGFNYQNEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVPY
AAVTQFENVIDRKPYPDDENLVEVKFARTPVTSTYLVAFVVGEYDFVETRSKDGVCVCVY
TPVGKAEQGKFALEEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELD
ALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKVETIQPAGASVSPFHG
IGGQQDSLSRSHCTQVLGKMPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIW
EPGESGSGVLRSRRVRMDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNN
NVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPM
NIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYG
TKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAA
RAPAAIGAHERADQAQISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGP
WARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGK
TLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNA
IVNARRRKLTVRPGFSRVARLLGDGCDPEDRAQASVMPGWNEL

>gi568815581f:38029496_38238550|GENSCAN_predicted_CDS_5|2292_bp
naaatacatgctacaggatttaactatcagaatgaagatgaaaaagtcaccttgtctttc
cctagtactctgcaaacaggtacaggaaccttaaagatagattttgttggagagctgaat
gacaaaatgaaaggtttctatagaagtaagtatactaccccttctggagaggtgccctat
gctgctgtaacacagtttgagaatgtaattgaccggaaaccataccctgatgatgaaaat
ttagtggaagtgaagtttgcccgcacacctgttacatctacatatctggtggcatttgtt
gtgggtgaatatgactttgtagaaacaaggtcaaaagatggtgtgtgtgtctgtgtttac
actcctgttggcaaagcagaacaaggaaaatttgcattagaggaatggtggactcatctt
tggttaaatgaaggttttgcatcctggattgaatatctgtgtgtagaccactgcttccca
gagtatgatatttggactcagtttgtttctgctgattacacccgtgcccaggagcttgac
gccttagataacagccatcctattgaagtcagtgtgggccatccatctgaggttgatgag
atatttgatgctatatcatatagcaaaggtgcatctgtcatccgaatgctgcatgactac
attggggataaggtggaaaccattcaacctgctggggccagtgtgtccccatttcatggc
attgggggacaacaggattctctgtctaggtcccactgtactcaagtccttgggaagatg
cccacccctgcttgggacttgagactccagagactggagcagctgtgggccactgggtct
ggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatctgg
gagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtggta
gaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaaaag
ggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaacaac
aacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgggag
gcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctgggagac
tgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgcccatg
aacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatgaagttgaaaaac
cccggaagataccagatcatgaaggagaagggcaagaggtcatctgagcacatccagcgc
atcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatacgga
accaagcagcgggaactactccacatcctcctggcatatgaggagtacaacccggaggtg
ggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgaggag
gatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggctgcc
cgggctcctgctgccatcggtgcccacgaacgggccgaccaagcccagatctctctcggg
ctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccgata
acaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggcccg
tgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtgctc
aagcatcttagggcctctatgaagaaactaacaagaaagaagggggacctgccaccccca
gccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcgggaag
accctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcggccc
atttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggggct
gtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaacgcc
attgttaatgcacggaggaggaagctgactgttagacctgggttttccagggttgcacgg
cttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccaggatgg
aatgagctgtga