GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:17:44

Sequence gi568815581f:37935054_38114590 : 179537 bp : 45.47% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   1363   1520  158  2  2   95   39   134 0.970   7.30
 1.02 PlyA +   4812   4817    6                               1.05

 2.00 Prom +  22789  22828   40                              -4.06
 2.01 Init +  28642  28644    3  0  0  113   81     0 0.652   1.80
 2.02 Intr +  31167  31256   90  2  0  110    0    65 0.058   0.09
 2.03 Term +  39036  39167  132  2  0  105   43   126 0.732   7.89
 2.04 PlyA +  40106  40111    6                               1.05

 3.15 PlyA -  40382  40377    6                               1.05
 3.14 Term -  42057  41900  158  1  2   95   39   129 0.098   6.80
 3.13 Intr -  43985  43773  213  0  0  101   49    81 0.082   4.19
 3.12 Intr -  45119  44967  153  0  0   85   80    74 0.107   6.34
 3.11 Intr -  45589  45490  100  1  1   91   89    78 0.118   7.88
 3.10 Intr -  46995  46943   53  1  2  100   38    82 0.094   3.03
 3.09 Intr -  47431  47311  121  1  1   92  110   146 0.994  17.27
 3.08 Intr -  48023  47975   49  1  1   97  117    62 0.987   8.68
 3.07 Intr -  49381  49272  110  1  2  102   82   146 0.996  14.48
 3.06 Intr -  49818  49711  108  0  0  102  101   153 0.993  18.48
 3.05 Intr -  50342  50262   81  2  0   52   92    42 0.607   0.83
 3.04 Intr -  50864  50825   40  1  1   80  116   -10 0.947  -0.77
 3.03 Intr -  52233  52148   86  0  2   81   79   118 0.945   8.82
 3.02 Intr -  52468  52396   73  0  1   90   82    60 0.941   5.01
 3.01 Init -  52668  52499  170  0  2   86   58    92 0.738   4.16
 3.00 Prom -  58144  58105   40                              -3.26

 4.00 Prom +  64831  64870   40                              -3.26
 4.01 Init +  70307  70476  170  1  2   86   58    92 0.737   4.16
 4.02 Intr +  70507  70579   73  1  1   90   82    60 0.941   5.01
 4.03 Intr +  70742  70827   86  1  2   81   79   118 0.945   8.82
 4.04 Intr +  72111  72150   40  0  1   80  116   -10 0.947  -0.77
 4.05 Intr +  72633  72713   81  2  0   52   92    42 0.607   0.83
 4.06 Intr +  73157  73264  108  1  0  102  101   153 0.993  18.48
 4.07 Intr +  73594  73703  110  0  2  102   82   146 0.996  14.48
 4.08 Intr +  74952  75000   49  0  1   97  117    62 0.987   8.68
 4.09 Intr +  75544  75664  121  0  1   92  110   146 0.994  17.27
 4.10 Intr +  75980  76032   53  0  2  100   38    77 0.306   2.53
 4.11 Intr +  77386  77485  100  0  1   91   89    78 0.399   7.88
 4.12 Intr +  77856  78008  153  1  0   85   80    82 0.365   7.14
 4.13 Intr +  78972  79184  213  1  0  101   49    81 0.263   4.19
 4.14 Term +  80900  81057  158  0  2   95   39   129 0.327   6.80
 4.15 PlyA +  84352  84357    6                               1.05

 5.00 Prom + 102315 102354   40                              -4.06
 5.01 Init + 108167 108169    3  1  0  113   81     0 0.640   1.80
 5.02 Term + 118574 118705  132  1  0  105   43   126 0.585   7.89
 5.03 PlyA + 119644 119649    6                               1.05

 6.15 PlyA - 119920 119915    6                               1.05
 6.14 Term - 121595 121438  158  0  2   95   39   129 0.186   6.80
 6.13 Intr - 123523 123311  213  2  0  101   49    81 0.156   4.19
 6.12 Intr - 124657 124505  153  2  0   85   80    88 0.221   7.74
 6.11 Intr - 125127 125028  100  0  1   91   89    78 0.242   7.88
 6.10 Intr - 126534 126482   53  1  2  100   38    77 0.184   2.53
 6.09 Intr - 126970 126850  121  1  1   92  110   146 0.994  17.27
 6.08 Intr - 127562 127514   49  1  1   97  117    85 0.987  10.98
 6.07 Intr - 128927 128818  110  2  2  102   82   146 0.997  14.48
 6.06 Intr - 129364 129257  108  1  0  102  101   153 0.993  18.48
 6.05 Intr - 129888 129808   81  0  0   52   92    42 0.607   0.83
 6.04 Intr - 130410 130371   40  2  1   80  116   -10 0.947  -0.77
 6.03 Intr - 131779 131694   86  1  2   81   79   118 0.945   8.82
 6.02 Intr - 132014 131942   73  1  1   90   82    60 0.941   5.01
 6.01 Init - 132214 132045  170  1  2   86   58    92 0.737   4.16
 6.00 Prom - 137690 137651   40                              -3.26

 7.00 Prom + 137979 138018   40                              -6.96
 7.01 Init + 141749 141751    3  1  0   71  101     0 0.699  -0.40
 7.02 Intr + 143209 143293   85  0  1  131  116    54 0.956  11.89
 7.03 Intr + 166350 166427   78  1  0   88  110    55 0.912   7.22
 7.04 Term + 176348 176490  143  0  2   80   38    67 0.210  -1.01
 7.05 PlyA + 177618 177623    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  46995  46838  158  1  2  100   48   133 0.883   8.60
S.002 Init +  53731  53782   52  0  1  123  105    85 0.968  15.02
S.003 Init -  69244  69193   52  1  1  123  105    85 0.962  15.02
S.004 Init + 133277 133328   52  1  1  123  105    85 0.950  15.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:37935054_38114590|GENSCAN_predicted_peptide_1|52_aa
XCRKAGVNAIVNARRRKLTVRPGFSRVARLLGDGCDPEDRAQASVMPGWNEL

>gi568815581f:37935054_38114590|GENSCAN_predicted_CDS_1|159_bp
ncgtgccgcaaagcaggcgtcaacgccattgttaatgcacggaggaggaagctgactgtt
agacctgggttttccagggttgcacggcttctgggagacggatgtgaccctgaggacagg
gcacaggccagtgtaatgccaggatggaatgagctgtga

>gi568815581f:37935054_38114590|GENSCAN_predicted_peptide_2|74_aa
MVETELKLICGDVLDVLDKHLIPAATTGKSKAVCEMFHVRGKQHIQIPKLYTSSVTRHLH
HFRLMQDSQPLDLS

>gi568815581f:37935054_38114590|GENSCAN_predicted_CDS_2|225_bp
atggttgagactgagctaaagttaatctgtggcgacgttctggatgtactggacaaacac
ctcattccagcagctacaactggcaagtccaaggcagtctgtgagatgtttcatgtccga
ggcaaacagcacattcagatccccaagctctacacctccagtgtgaccaggcacctgcac
cacttcaggctcatgcaggactcacagcctttggacctcagctaa

>gi568815581f:37935054_38114590|GENSCAN_predicted_peptide_3|504_aa
MPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDV
VEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAR
EAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLK
NPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPE
VGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHERADQAQISL
GLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTV
LKHLRASMKKLTRKQGDLQPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPR
PIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFSRVA
RLLGDGCDPEDRAQASVMPGWNEL

>gi568815581f:37935054_38114590|GENSCAN_predicted_CDS_3|1515_bp
atgcccacccctgcttgggacttgagactccagagactggagcagctgtgggccactggg
tctggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatc
tgggagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtg
gtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaa
aagggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaac
aacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgg
gaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctggga
gactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgccc
atgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatgaagttgaaa
aaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgagcacatccag
cgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatac
ggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtataacccggag
gtgggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgag
gaggatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggct
gcccgggctcctgctgccatcggtgcccacgaacgggccgaccaagcccagatctctctc
gggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccg
ataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggc
ccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtg
ctcaagcatcttagggcctctatgaagaaactaacaagaaagcagggggacctgcaaccc
ccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcggg
aagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcgg
cccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggg
gctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaac
gccattgttaatgcacggaggaggaacctgactgttagacctgggttttccagggttgca
cggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccagga
tggaatgagctgtga

>gi568815581f:37935054_38114590|GENSCAN_predicted_peptide_4|504_aa
MPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDV
VEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAR
EAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLK
NPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPE
VGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQISL
GLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTV
LKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPR
PIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFSRVA
RLLGDGCDPEDRAQASVMPGWNEL

>gi568815581f:37935054_38114590|GENSCAN_predicted_CDS_4|1515_bp
atgcccacccctgcttgggacttgagactccagagactggagcagctgtgggccactggg
tctggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatc
tgggagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtg
gtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaa
aagggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaac
aacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgg
gaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctggga
gactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgccc
atgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatgaagttgaaa
aaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgagcacatccag
cgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatac
ggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtataacccggag
gtgggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgag
gaggatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggct
gcccgggctcctgctgccatcggtgcccacgaatgggccgaccaagcccagatctctctc
gggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccg
ataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggc
ccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtg
ctcaagcatcttagggcctctatgaagaaactaacaagaaagcagggggacctgccaccc
ccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcggg
aagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcgg
cccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggg
gctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaac
gccattgttaatgcacggaggaggaacctgactgttagacctgggttttccagggttgca
cggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccagga
tggaatgagctgtga

>gi568815581f:37935054_38114590|GENSCAN_predicted_peptide_5|44_aa
MAVCEMFHVRGKQHIQIPKLYTSSVTRHLHHFRLMQDSQPLDLS

>gi568815581f:37935054_38114590|GENSCAN_predicted_CDS_5|135_bp
atggcagtctgtgagatgtttcatgtccgaggcaaacagcacattcagatccccaagctc
tacacctccagtgtgaccaggcacctgcaccacttcaggctcatgcaggactcacagcct
ttggacctcagctaa

>gi568815581f:37935054_38114590|GENSCAN_predicted_peptide_6|504_aa
MPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDV
VEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAR
EAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLK
NPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPE
VGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQISL
GLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTV
LKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPR
PIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFSRVA
RLLGDGCDPEDRAQASVMPGWNEL

>gi568815581f:37935054_38114590|GENSCAN_predicted_CDS_6|1515_bp
atgcccacccctgcttgggacttgagactccagagactggagcagctgtgggccactggg
tctggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatc
tgggagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtg
gtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaa
aagggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaac
aacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgg
gaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctggga
gactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgccc
atgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatgaagttgaaa
aaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgagcacatccag
cgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatac
ggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtacaacccggag
gtgggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgag
gaggatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggct
gcccgggctcctgctgccatcggtgcccacgaatgggccgaccaagcccagatctctctc
gggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccg
ataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggc
ccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtg
ctcaagcatcttagggcctctatgaagaaactaacaagaaagaagggggacctgccaccc
ccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcggg
aagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcgg
cccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggg
gctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaac
gccattgttaatgcacggaggaggaacctgactgttagacctgggttttccagggttgca
cggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccagga
tggaatgagctgtga

>gi568815581f:37935054_38114590|GENSCAN_predicted_peptide_7|102_aa
MVRQATNQIVMNCADIDIITASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTL
KIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEVWVILL

>gi568815581f:37935054_38114590|GENSCAN_predicted_CDS_7|309_bp
atggtgaggcaggcgactaatcagattgtgatgaattgtgctgatattgatattattaca
gcttcatatgcaccagaaggagatgaagaaatacatgctacaggatttaactatcagaat
gaagatgaaaaagtcaccttgtctttccctagtactctgcaaacaggtacaggaacctta
aagatagattttgttggagagctgaatgacaaaatgaaaggtttctatagaagtaagtat
actaccccttctggagaggtgcgctatgctgctgtaacacagtttgaggtatgggttatt
cttctctaa