GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:18:00

Sequence gi568815581f:37826000_38005560 : 179561 bp : 45.52% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1370   1365    6                              -0.45
 1.02 Term -   2965   2706  260  2  2   95   43   139 0.657   5.81
 1.01 Init -  18947  18881   67  2  1   88   78    88 0.680   7.04
 1.00 Prom -  19109  19070   40                              -8.36

 2.11 PlyA -  20486  20481    6                               1.05
 2.10 Term -  21463  21314  150  1  0  117   41    64 0.574   2.51
 2.09 Intr -  28509  28404  106  2  1   76   55   111 0.954   6.82
 2.08 Intr -  29230  29124  107  1  2  110   51    87 0.985   6.21
 2.07 Intr -  48314  48205  110  0  2   86   87    36 0.124   3.30
 2.06 Intr -  58016  57962   55  2  1   94   98     4 0.032   0.55
 2.05 Intr -  67605  67590   16  2  1  138   55     2 0.003  -2.55
 2.04 Intr -  92297  92229   69  1  0   87  102    28 0.266   2.40
 2.03 Intr -  95602  95464  139  2  1   70   59   125 0.804   7.32
 2.02 Intr -  96323  96291   33  0  0   80  110    35 0.885   3.09
 2.01 Init -  98737  98686   52  1  1  123  105    85 0.999  15.02
 2.00 Prom -  99182  99143   40                             -14.86

 3.00 Prom +  99408  99447   40                             -14.47
 3.01 Init +  99800  99969  170  1  2   86   58    92 0.739   4.16
 3.02 Intr + 100000 100072   73  1  1   90   82    60 0.941   5.01
 3.03 Intr + 100235 100320   86  1  2   81   79   118 0.945   8.82
 3.04 Intr + 101604 101643   40  0  1   80  116   -10 0.947  -0.77
 3.05 Intr + 102126 102206   81  2  0   52   92    42 0.607   0.83
 3.06 Intr + 102650 102757  108  1  0  102  101   162 0.993  19.38
 3.07 Intr + 103087 103196  110  0  2  102   82   163 0.996  16.18
 3.08 Intr + 104451 104499   49  0  1   97  117    62 0.987   8.68
 3.09 Intr + 105043 105163  121  0  1   92  110   146 0.994  17.27
 3.10 Intr + 105479 105531   53  0  2  100   38    77 0.425   2.53
 3.11 Intr + 106885 106984  100  0  1   91   89    78 0.553   7.88
 3.12 Intr + 107355 107507  153  1  0   85   80    88 0.507   7.74
 3.13 Intr + 108489 108701  213  1  0  101   49    81 0.419   4.19
 3.14 Term + 110417 110574  158  0  2   95   39   134 0.503   7.30
 3.15 PlyA + 113866 113871    6                               1.05

 4.00 Prom + 131843 131882   40                              -4.06
 4.01 Init + 137696 137698    3  1  0  113   81     0 0.648   1.80
 4.02 Intr + 140221 140310   90  0  0  110    0    65 0.058   0.09
 4.03 Term + 148090 148221  132  0  0  105   43   126 0.732   7.89
 4.04 PlyA + 149160 149165    6                               1.05

 5.15 PlyA - 149436 149431    6                               1.05
 5.14 Term - 151111 150954  158  2  2   95   39   129 0.098   6.80
 5.13 Intr - 153039 152827  213  1  0  101   49    81 0.082   4.19
 5.12 Intr - 154173 154021  153  1  0   85   80    74 0.107   6.34
 5.11 Intr - 154643 154544  100  2  1   91   89    78 0.118   7.88
 5.10 Intr - 156049 155997   53  2  2  100   38    82 0.094   3.03
 5.09 Intr - 156485 156365  121  2  1   92  110   146 0.994  17.27
 5.08 Intr - 157077 157029   49  2  1   97  117    62 0.987   8.68
 5.07 Intr - 158435 158326  110  2  2  102   82   146 0.996  14.48
 5.06 Intr - 158872 158765  108  1  0  102  101   153 0.993  18.48
 5.05 Intr - 159396 159316   81  0  0   52   92    42 0.607   0.83
 5.04 Intr - 159918 159879   40  2  1   80  116   -10 0.947  -0.77
 5.03 Intr - 161287 161202   86  1  2   81   79   118 0.945   8.82
 5.02 Intr - 161522 161450   73  1  1   90   82    60 0.941   5.01
 5.01 Init - 161722 161553  170  1  2   86   58    92 0.738   4.16
 5.00 Prom - 167198 167159   40                              -3.26

 6.03 PlyA - 168199 168194    6                               1.05
 6.02 Term - 175077 175064   14  1  2  115   37    10 0.408  -3.04
 6.01 Init - 178298 178247   52  2  1  123  105    85 0.871  15.02

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 156049 155892  158  2  2  100   48   133 0.883   8.60
S.002 Init + 162785 162836   52  1  1  123  105    85 0.968  15.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:37826000_38005560|GENSCAN_predicted_peptide_1|108_aa
MGTTRGWTVRRARVRFLALATREAEQPGDNGRKEALVSSGTVLLTEQGTALAGDVYADFG
VWIRRGSWLADGAQAYGKQDDLRVKNKQPWVWSQGLGGKDESAETDGN

>gi568815581f:37826000_38005560|GENSCAN_predicted_CDS_1|327_bp
atgggcaccacccggggctggacagtcaggcgggctagggtgcggttcctcgcactcgcc
actagagaagcagagcaaccaggagacaacggaaggaaagaggccctggtctcctcggga
actgtgttactgacagaacaaggaacagctttggctggagatgtttatgctgactttgga
gtatggatcagaagagggtcctggcttgctgatggagctcaggcctatggaaaacaggat
gatcttagagttaaaaacaaacaaccctgggtgtggtctcagggcctgggaggaaaggat
gagtcagctgaaactgatggaaattaa

>gi568815581f:37826000_38005560|GENSCAN_predicted_peptide_2|278_aa
METKEPIVYTGSVERAPGPFGALATSSPDHTMEAGSPVGTTRASCDLQFLLPGVWGAHSG
EHGTPHTPHFEDAGRGWNICPEKANTSIGHVSLSPFATPLVMYRCELCPHKDGALKRTDN
GGWAHEVCALYIPEVQFANDSTMEPIVLQSVPHDHCNKVETELKLICGDVLDALDKHLIP
AATTGKSKVFYYEMKGVYHRYLAEFATGNDRKEVAENSLVAYKAASDIADKPVVPGVLSH
LYPRSLLELNRGSCTRTSGLGPNIIRTDALDTWLRLLS

>gi568815581f:37826000_38005560|GENSCAN_predicted_CDS_2|837_bp
atggagacgaaagagccaatcgtctacacgggcagtgtagaacgggcgcctgggcctttt
ggagccctggccacgtcctccccagatcacacgatggaagctggcagccccgtgggcacc
actcgagccagctgtgacctgcagtttctgcttcctggagtgtggggcgcccactcagga
gagcacggcacaccccacacccctcattttgaggatgctgggaggggatggaatatttgt
cctgagaaggccaatacatccatcggacacgtgtctctatccccatttgctacgcctttg
gttatgtatagatgtgaactttgtccccataaggatggagctttaaaaagaacagataat
gggggttgggcccatgaggtgtgtgctctgtatattccggaggtacaatttgccaatgat
tccacaatggaaccaattgttttacagtctgttccacatgatcattgtaataaggttgag
actgagctaaagttaatctgcggcgatgttctggatgcactggacaaacacctcattcca
gcagctaccactggcaagtccaaggttttctattatgaaatgaaaggggtctaccacagg
tatctggcagaatttgccacaggaaatgacaggaaggaggtggcagagaacagcttggtg
gcttacaaagctgctagtgatattgcagataagccagtggtccctggggtcctttctcat
ctgtaccccaggagtcttctggagctgaaccgaggctcttgcacacgcacatctgggctt
ggacccaacatcatcagaactgacgctctagacacatggcttcgactcctttcataa

>gi568815581f:37826000_38005560|GENSCAN_predicted_peptide_3|504_aa
MPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDV
VEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAR
EAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLK
NPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPE
VGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHEWADQAQISL
GLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTV
LKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPR
PIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRKLTVRPGFSRVA
RLLGDGCDPEDRAQASVMPGWNEL

>gi568815581f:37826000_38005560|GENSCAN_predicted_CDS_3|1515_bp
atgcccacccctgcttgggacttgagactccagagactggagcagctgtgggccactggg
tctggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatc
tgggagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtg
gtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaa
aagggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaac
aacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgg
gaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctggga
gactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgccc
atgaacatccggggcccgatgtggtcagtcctcctgaacattgaggaaatgaagttgaaa
aaccccggaagataccagatcatgaaggagaagggcaagaagtcatctgagcacatccag
cgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatac
ggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtataacccggag
gtgggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgag
gaggatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggct
gcccgggctcctgctgccatcggtgcccacgaatgggccgaccaagcccagatctctctc
gggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccg
ataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggc
ccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtg
ctcaagcatcttagggcctctatgaagaaactaacaagaaagaagggggacctgccaccc
ccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcggg
aagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcgg
cccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggg
gctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaac
gccattgttaatgcacggaggaggaagctgactgttagacctgggttttccagggttgca
cggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccagga
tggaatgagctgtga

>gi568815581f:37826000_38005560|GENSCAN_predicted_peptide_4|74_aa
MVETELKLICGDVLDVLDKHLIPAATTGKSKAVCEMFHVRGKQHIQIPKLYTSSVTRHLH
HFRLMQDSQPLDLS

>gi568815581f:37826000_38005560|GENSCAN_predicted_CDS_4|225_bp
atggttgagactgagctaaagttaatctgtggcgacgttctggatgtactggacaaacac
ctcattccagcagctacaactggcaagtccaaggcagtctgtgagatgtttcatgtccga
ggcaaacagcacattcagatccccaagctctacacctccagtgtgaccaggcacctgcac
cacttcaggctcatgcaggactcacagcctttggacctcagctaa

>gi568815581f:37826000_38005560|GENSCAN_predicted_peptide_5|504_aa
MPTPAWDLRLQRLEQLWATGSGPFFPGGGGGMGVTQPASIWEPGESGSGVLRSRRVRMDV
VEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAR
EAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLK
NPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPE
VGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQAARAPAAIGAHERADQAQISL
GLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTV
LKHLRASMKKLTRKQGDLQPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPR
PIWSASPPRAPRSSTPCPGGAVREDTYPVGTQACRKAGVNAIVNARRRNLTVRPGFSRVA
RLLGDGCDPEDRAQASVMPGWNEL

>gi568815581f:37826000_38005560|GENSCAN_predicted_CDS_5|1515_bp
atgcccacccctgcttgggacttgagactccagagactggagcagctgtgggccactggg
tctggcccctttttccctgggggcggcggtggaatgggggttacgcagccagccagcatc
tgggagcccggcgagagcggttcaggtgttctccgaagccgccgcgtacggatggacgtg
gtagaggtcgcgggcagttggtgggcacaagagcgagaggacatcattatgaaatacgaa
aagggacaccgagctgggctgccagaggacaaggggcctaagccttttcgaagctacaac
aacaacgtcgatcatttggggattgtacatgagacggagctgcctcctctgactgcgcgg
gaggcgaagcaaattcggcgggagatcagccgaaagagcaagtgggtggatatgctggga
gactgggagaaatacaaaagcagcagaaagctcatagatcgagcgtacaagggaatgccc
atgaacatccggggcccgatgtggtcagtcctcctgaacactgaggaaatgaagttgaaa
aaccccggaagataccagatcatgaaggagaagggcaagaggtcatctgagcacatccag
cgcatcgaccgggacgtaagcgggacattaaggaagcatatattcttcagggatcgatac
ggaaccaagcagcgggaactactccacatcctcctggcatatgaggagtataacccggag
gtgggctactgcagggacctgagccacatcgccgccttgttcctcctctatcttcctgag
gaggatgcattctgggcactggtgcagctgctggccagtgagaggcactccctgcaggct
gcccgggctcctgctgccatcggtgcccacgaacgggccgaccaagcccagatctctctc
gggctcaccctgcgcctgtgggacgtgtatctggtagaaggcgaacaggcgttgatgccg
ataacaagaatcgcctttaaggttcagcagaagcgcctcacgaagacgtccaggtgtggc
ccgtgggcacgtttttgcaaccggttcgttgatacctgggccagggatgaggacactgtg
ctcaagcatcttagggcctctatgaagaaactaacaagaaagcagggggacctgcaaccc
ccagccaaacccgagcaagggtcgtcggcatccaggcctgtgccggcttcacgtggcggg
aagaccctctgcaagggggacaggcaggcccctccaggcccaccagcccggttcccgcgg
cccatttggtcagcttccccgccacgggcacctcgttcttccacaccctgtcctggtggg
gctgtccgggaagacacctaccctgtgggcactcaggcgtgccgcaaagcaggcgtcaac
gccattgttaatgcacggaggaggaacctgactgttagacctgggttttccagggttgca
cggcttctgggagacggatgtgaccctgaggacagggcacaggccagtgtaatgccagga
tggaatgagctgtga

>gi568815581f:37826000_38005560|GENSCAN_predicted_peptide_6|21_aa
METKEPIVYTGSVERAPASWF

>gi568815581f:37826000_38005560|GENSCAN_predicted_CDS_6|66_bp
atggagacgaaagagccaatcgtctacacgggcagtgtagaacgggcgcctgcttcctgg
ttctag